RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 JPH4Q96JJ6 628 aa23.21■■□□□ 1.31
PFDN1-206ENST00000514611 CUL7Q14999 1698 aa23.2■■□□□ 1.3
PFDN1-206ENST00000514611 KIAA0586Q9BVV6 1533 aa23.13■■□□□ 1.29
PFDN1-206ENST00000514611 CARMIL1Q5VZK9 1371 aa23.09■■□□□ 1.29
PFDN1-206ENST00000514611 ADCY10Q96PN6 1610 aa23■■□□□ 1.27
PFDN1-206ENST00000514611 KIF13AQ9H1H9 1805 aa22.94■■□□□ 1.26
PFDN1-206ENST00000514611 IQGAP2Q13576 1575 aa22.94■■□□□ 1.26
PFDN1-206ENST00000514611 MAPKBP1O60336 1514 aa22.92■■□□□ 1.26
PFDN1-206ENST00000514611 RAPGEF2Q9Y4G8 1499 aa22.91■■□□□ 1.26
PFDN1-206ENST00000514611 NPM1P06748 294 aaKnown RBP eCLIP22.89■■□□□ 1.25
PFDN1-206ENST00000514611 ABCC10Q5T3U5 1492 aa22.89■■□□□ 1.25
PFDN1-206ENST00000514611 TTBK1Q5TCY1 1321 aaPredicted RBP22.88■■□□□ 1.25
PFDN1-206ENST00000514611 PTPRGP23470 1445 aa22.88■■□□□ 1.25
PFDN1-206ENST00000514611 CARMIL2Q6F5E8 1435 aa22.87■■□□□ 1.25
PFDN1-206ENST00000514611 DIP2BQ9P265 1576 aa22.86■■□□□ 1.25
PFDN1-206ENST00000514611 TNIKQ9UKE5 1360 aa22.86■■□□□ 1.25
PFDN1-206ENST00000514611 DISP1Q96F81 1524 aa22.84■■□□□ 1.25
PFDN1-206ENST00000514611 FAM69CQ0P6D2 419 aa22.84■■□□□ 1.25
PFDN1-206ENST00000514611 UGGT2Q9NYU1 1516 aa22.8■■□□□ 1.24
PFDN1-206ENST00000514611 ABCC2Q92887 1545 aa22.77■■□□□ 1.24
PFDN1-206ENST00000514611 KIAA0556O60303 1618 aa22.76■■□□□ 1.23
PFDN1-206ENST00000514611 UACAQ9BZF9 1416 aa22.73■■□□□ 1.23
PFDN1-206ENST00000514611 UHRF1BP1LA0JNW5 1464 aa22.73■■□□□ 1.23
PFDN1-206ENST00000514611 PRXQ9BXM0 1461 aa22.72■■□□□ 1.23
PFDN1-206ENST00000514611 CTTNBP2Q8WZ74 1663 aa22.71■■□□□ 1.23
PFDN1-206ENST00000514611 ASXL2Q76L83 1435 aa22.69■■□□□ 1.22
PFDN1-206ENST00000514611 PLB1Q6P1J6 1458 aa22.64■■□□□ 1.21
PFDN1-206ENST00000514611 TSPOAP1O95153 1857 aa22.64■■□□□ 1.21
PFDN1-206ENST00000514611 KDM5BQ9UGL1 1544 aa22.63■■□□□ 1.21
PFDN1-206ENST00000514611 AEBP2Q6ZN18 517 aaPredicted RBP22.63■■□□□ 1.21
PFDN1-206ENST00000514611 KDM6BO15054 1643 aa22.61■■□□□ 1.21
PFDN1-206ENST00000514611 ZCCHC11Q5TAX3 1644 aaKnown RBP22.6■■□□□ 1.21
PFDN1-206ENST00000514611 GOLGA3Q08378 1498 aa22.59■■□□□ 1.21
PFDN1-206ENST00000514611 GLI2P10070 1586 aa22.59■■□□□ 1.21
PFDN1-206ENST00000514611 EPRSP07814 1512 aaKnown RBP22.56■■□□□ 1.2
PFDN1-206ENST00000514611 PPRC1Q5VV67 1664 aaKnown RBP22.55■■□□□ 1.2
PFDN1-206ENST00000514611 ABCA8O94911 1581 aa22.53■■□□□ 1.2
PFDN1-206ENST00000514611 CSRNP3Q8WYN3 585 aa22.51■■□□□ 1.19
PFDN1-206ENST00000514611 WDR7Q9Y4E6 1490 aa22.49■■□□□ 1.19
PFDN1-206ENST00000514611 MAP3K4Q9Y6R4 1608 aa22.49■■□□□ 1.19
PFDN1-206ENST00000514611 EEA1Q15075 1411 aa22.45■■□□□ 1.18
PFDN1-206ENST00000514611 P3H3Q8IVL6 736 aa22.44■■□□□ 1.18
PFDN1-206ENST00000514611 SAMD9Q5K651 1589 aa22.42■■□□□ 1.18
PFDN1-206ENST00000514611 COL17A1Q9UMD9 1497 aaPredicted RBP22.41■■□□□ 1.18
PFDN1-206ENST00000514611 FAM9AQ8IZU1 332 aaPredicted RBP22.4■■□□□ 1.18
PFDN1-206ENST00000514611 TEX14Q8IWB6 1497 aa22.39■■□□□ 1.17
PFDN1-206ENST00000514611 ARID3CA6NKF2 412 aa22.37■■□□□ 1.17
PFDN1-206ENST00000514611 KCNH8Q96L42 1107 aa22.34■■□□□ 1.17
PFDN1-206ENST00000514611 KDM4FA0A1W2PPD8 638 aa22.33■■□□□ 1.17
PFDN1-206ENST00000514611 ATP10BO94823 1461 aa22.33■■□□□ 1.16
PFDN1-206ENST00000514611 RANGAP1P46060 587 aaPredicted RBP22.32■■□□□ 1.16
PFDN1-206ENST00000514611 CFAP43Q8NDM7 1665 aa22.32■■□□□ 1.16
PFDN1-206ENST00000514611 CD109Q6YHK3 1445 aa22.31■■□□□ 1.16
PFDN1-206ENST00000514611 KIF21BO75037 1637 aa22.31■■□□□ 1.16
PFDN1-206ENST00000514611 FHOD3Q2V2M9 1422 aa22.31■■□□□ 1.16
PFDN1-206ENST00000514611 RAPGEF6Q8TEU7 1601 aa22.3■■□□□ 1.16
PFDN1-206ENST00000514611 MAGI3Q5TCQ9 1506 aa22.3■■□□□ 1.16
PFDN1-206ENST00000514611 NUP153P49790 1475 aaKnown RBP22.24■■□□□ 1.15
PFDN1-206ENST00000514611 CHIC1Q5VXU3 224 aa22.22■■□□□ 1.15
PFDN1-206ENST00000514611 ADGRL1O94910 1474 aa22.21■■□□□ 1.15
PFDN1-206ENST00000514611 EFCAB5A4FU69 1503 aa22.2■■□□□ 1.14
PFDN1-206ENST00000514611 EHMT2Q96KQ7 1210 aa22.19■■□□□ 1.14
PFDN1-206ENST00000514611 ABCA9Q8IUA7 1624 aa22.19■■□□□ 1.14
PFDN1-206ENST00000514611 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.17■■□□□ 1.14
PFDN1-206ENST00000514611 HNRNPUL2Q1KMD3 747 aaKnown RBP22.17■■□□□ 1.14
PFDN1-206ENST00000514611 ARAP3Q8WWN8 1544 aa22.11■■□□□ 1.13
PFDN1-206ENST00000514611 UBTFP17480 764 aaKnown RBP22.09■■□□□ 1.13
PFDN1-206ENST00000514611 CDK13Q14004 1512 aaKnown RBP22.06■■□□□ 1.12
PFDN1-206ENST00000514611 ARHGAP35Q9NRY4 1499 aa22.05■■□□□ 1.12
PFDN1-206ENST00000514611 NEO1Q92859 1461 aa22.04■■□□□ 1.12
PFDN1-206ENST00000514611 PHLDB1Q86UU1 1377 aa22.02■■□□□ 1.12
PFDN1-206ENST00000514611 PLEKHD1A6NEE1 506 aa22.02■■□□□ 1.12
PFDN1-206ENST00000514611 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.01■■□□□ 1.11
PFDN1-206ENST00000514611 FRMPD1Q5SYB0 1578 aa22.01■■□□□ 1.11
PFDN1-206ENST00000514611 TTC37Q6PGP7 1564 aa22■■□□□ 1.11
PFDN1-206ENST00000514611 RAPGEF3O95398 923 aa22■■□□□ 1.11
PFDN1-206ENST00000514611 FMN1Q68DA7 1419 aa21.98■■□□□ 1.11
PFDN1-206ENST00000514611 HECW1Q76N89 1606 aa21.98■■□□□ 1.11
PFDN1-206ENST00000514611 ATP1B4Q9UN42 357 aaPredicted RBP21.94■■□□□ 1.1
PFDN1-206ENST00000514611 FANCAO15360 1455 aa21.94■■□□□ 1.1
PFDN1-206ENST00000514611 AKNAQ7Z591 1439 aa21.92■■□□□ 1.1
PFDN1-206ENST00000514611 CFAP74Q9C0B2 1584 aa21.91■■□□□ 1.1
PFDN1-206ENST00000514611 DENND4BO75064 1496 aaPredicted RBP21.9■■□□□ 1.1
PFDN1-206ENST00000514611 RICTORQ6R327 1708 aa21.89■■□□□ 1.09
PFDN1-206ENST00000514611 HECW2Q9P2P5 1572 aa21.87■■□□□ 1.09
PFDN1-206ENST00000514611 ARHGEF40Q8TER5 1519 aa21.87■■□□□ 1.09
PFDN1-206ENST00000514611 KIF14Q15058 1648 aa21.85■■□□□ 1.09
PFDN1-206ENST00000514611 LRRIQ1Q96JM4 1722 aa21.84■■□□□ 1.09
PFDN1-206ENST00000514611 PLCH2O75038 1416 aa21.84■■□□□ 1.09
PFDN1-206ENST00000514611 PCF11O94913 1555 aaKnown RBP21.83■■□□□ 1.09
PFDN1-206ENST00000514611 ADAMTSL3P82987 1691 aa21.82■■□□□ 1.08
PFDN1-206ENST00000514611 ZMYM4Q5VZL5 1548 aa21.82■■□□□ 1.08
PFDN1-206ENST00000514611 TROQ12816 1431 aaPredicted RBP21.81■■□□□ 1.08
PFDN1-206ENST00000514611 CDK11AQ9UQ88 783 aaPredicted RBP21.8■■□□□ 1.08
PFDN1-206ENST00000514611 BCORL1Q5H9F3 1711 aa21.8■■□□□ 1.08
PFDN1-206ENST00000514611 POGZQ7Z3K3 1410 aa21.79■■□□□ 1.08
PFDN1-206ENST00000514611 YEATS2Q9ULM3 1422 aa21.79■■□□□ 1.08
PFDN1-206ENST00000514611 ARID4BQ4LE39 1312 aaPredicted RBP21.79■■□□□ 1.08
PFDN1-206ENST00000514611 MYO5CQ9NQX4 1742 aa21.78■■□□□ 1.08
PFDN1-206ENST00000514611 SCAPERQ9BY12 1400 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms