RNA–Protein interactions for RNA: ENST00000514285.1

SERF1B-207, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2

Gene SERF1B, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-207ENST00000514285 ERCC6L2Q5T890 1561 aa24.67■■□□□ 1.54
SERF1B-207ENST00000514285 JPH4Q96JJ6 628 aa24.66■■□□□ 1.54
SERF1B-207ENST00000514285 RAPGEF2Q9Y4G8 1499 aa24.65■■□□□ 1.54
SERF1B-207ENST00000514285 PRG4Q92954 1404 aaPredicted RBP24.64■■□□□ 1.54
SERF1B-207ENST00000514285 IQGAP2Q13576 1575 aa24.54■■□□□ 1.52
SERF1B-207ENST00000514285 PRXQ9BXM0 1461 aa24.54■■□□□ 1.52
SERF1B-207ENST00000514285 EEA1Q15075 1411 aa24.53■■□□□ 1.52
SERF1B-207ENST00000514285 CHIC1Q5VXU3 224 aa24.5■■□□□ 1.51
SERF1B-207ENST00000514285 CSRNP3Q8WYN3 585 aa24.46■■□□□ 1.51
SERF1B-207ENST00000514285 CARMIL2Q6F5E8 1435 aa24.44■■□□□ 1.5
SERF1B-207ENST00000514285 CTTNBP2Q8WZ74 1663 aa24.42■■□□□ 1.5
SERF1B-207ENST00000514285 UGGT2Q9NYU1 1516 aa24.4■■□□□ 1.5
SERF1B-207ENST00000514285 DISP1Q96F81 1524 aa24.36■■□□□ 1.49
SERF1B-207ENST00000514285 TNIKQ9UKE5 1360 aa24.36■■□□□ 1.49
SERF1B-207ENST00000514285 PTPRGP23470 1445 aa24.34■■□□□ 1.49
SERF1B-207ENST00000514285 TRHP20396 242 aaPredicted RBP24.33■■□□□ 1.49
SERF1B-207ENST00000514285 FAM9AQ8IZU1 332 aaPredicted RBP24.32■■□□□ 1.48
SERF1B-207ENST00000514285 KIAA0556O60303 1618 aa24.31■■□□□ 1.48
SERF1B-207ENST00000514285 ADCY10Q96PN6 1610 aa24.28■■□□□ 1.48
SERF1B-207ENST00000514285 GOLGA3Q08378 1498 aa24.27■■□□□ 1.48
SERF1B-207ENST00000514285 KIF21BO75037 1637 aa24.27■■□□□ 1.48
SERF1B-207ENST00000514285 TTBK1Q5TCY1 1321 aaPredicted RBP24.23■■□□□ 1.47
SERF1B-207ENST00000514285 NPM1P06748 294 aaKnown RBP eCLIP24.22■■□□□ 1.47
SERF1B-207ENST00000514285 UACAQ9BZF9 1416 aa24.18■■□□□ 1.46
SERF1B-207ENST00000514285 MAPKBP1O60336 1514 aa24.18■■□□□ 1.46
SERF1B-207ENST00000514285 UHRF1BP1LA0JNW5 1464 aa24.18■■□□□ 1.46
SERF1B-207ENST00000514285 ABCC2Q92887 1545 aa24.15■■□□□ 1.46
SERF1B-207ENST00000514285 SAMD9Q5K651 1589 aa24.12■■□□□ 1.45
SERF1B-207ENST00000514285 ABCC10Q5T3U5 1492 aa24.07■■□□□ 1.44
SERF1B-207ENST00000514285 PLB1Q6P1J6 1458 aa24.06■■□□□ 1.44
SERF1B-207ENST00000514285 KDM5BQ9UGL1 1544 aa24.05■■□□□ 1.44
SERF1B-207ENST00000514285 KIF13AQ9H1H9 1805 aa24.05■■□□□ 1.44
SERF1B-207ENST00000514285 ABCA8O94911 1581 aa24.04■■□□□ 1.44
SERF1B-207ENST00000514285 DIP2BQ9P265 1576 aa24.03■■□□□ 1.44
SERF1B-207ENST00000514285 UBTFP17480 764 aaKnown RBP24.02■■□□□ 1.44
SERF1B-207ENST00000514285 P3H3Q8IVL6 736 aa24.02■■□□□ 1.44
SERF1B-207ENST00000514285 EFCAB5A4FU69 1503 aa24.01■■□□□ 1.43
SERF1B-207ENST00000514285 ASXL2Q76L83 1435 aa24■■□□□ 1.43
SERF1B-207ENST00000514285 ZCCHC11Q5TAX3 1644 aaKnown RBP23.99■■□□□ 1.43
SERF1B-207ENST00000514285 FAM69CQ0P6D2 419 aa23.99■■□□□ 1.43
SERF1B-207ENST00000514285 EHMT2Q96KQ7 1210 aa23.99■■□□□ 1.43
SERF1B-207ENST00000514285 RANGAP1P46060 587 aaPredicted RBP23.98■■□□□ 1.43
SERF1B-207ENST00000514285 FHOD3Q2V2M9 1422 aa23.95■■□□□ 1.42
SERF1B-207ENST00000514285 RAPGEF6Q8TEU7 1601 aa23.89■■□□□ 1.42
SERF1B-207ENST00000514285 WDR7Q9Y4E6 1490 aa23.88■■□□□ 1.41
SERF1B-207ENST00000514285 GLI2P10070 1586 aa23.88■■□□□ 1.41
SERF1B-207ENST00000514285 EPRSP07814 1512 aaKnown RBP23.86■■□□□ 1.41
SERF1B-207ENST00000514285 ARHGAP35Q9NRY4 1499 aa23.83■■□□□ 1.41
SERF1B-207ENST00000514285 ATP10BO94823 1461 aa23.82■■□□□ 1.4
SERF1B-207ENST00000514285 NUP153P49790 1475 aaKnown RBP23.81■■□□□ 1.4
SERF1B-207ENST00000514285 FMN1Q68DA7 1419 aa23.78■■□□□ 1.4
SERF1B-207ENST00000514285 ARID3CA6NKF2 412 aa23.78■■□□□ 1.4
SERF1B-207ENST00000514285 TSPOAP1O95153 1857 aa23.78■■□□□ 1.4
SERF1B-207ENST00000514285 MAP3K4Q9Y6R4 1608 aa23.76■■□□□ 1.39
SERF1B-207ENST00000514285 PPRC1Q5VV67 1664 aaKnown RBP23.72■■□□□ 1.39
SERF1B-207ENST00000514285 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.7■■□□□ 1.38
SERF1B-207ENST00000514285 HNRNPUL2Q1KMD3 747 aaKnown RBP23.7■■□□□ 1.38
SERF1B-207ENST00000514285 KCNH8Q96L42 1107 aa23.7■■□□□ 1.38
SERF1B-207ENST00000514285 CFAP43Q8NDM7 1665 aa23.69■■□□□ 1.38
SERF1B-207ENST00000514285 TEX14Q8IWB6 1497 aa23.68■■□□□ 1.38
SERF1B-207ENST00000514285 HECW1Q76N89 1606 aa23.68■■□□□ 1.38
SERF1B-207ENST00000514285 CLIP1P30622 1438 aa23.67■■□□□ 1.38
SERF1B-207ENST00000514285 KDM6BO15054 1643 aa23.66■■□□□ 1.38
SERF1B-207ENST00000514285 CD109Q6YHK3 1445 aa23.65■■□□□ 1.38
SERF1B-207ENST00000514285 MAGI3Q5TCQ9 1506 aa23.63■■□□□ 1.37
SERF1B-207ENST00000514285 CDK13Q14004 1512 aaKnown RBP23.62■■□□□ 1.37
SERF1B-207ENST00000514285 PLEKHD1A6NEE1 506 aa23.61■■□□□ 1.37
SERF1B-207ENST00000514285 ABCA9Q8IUA7 1624 aa23.6■■□□□ 1.37
SERF1B-207ENST00000514285 ATP1B4Q9UN42 357 aaPredicted RBP23.59■■□□□ 1.37
SERF1B-207ENST00000514285 CASKIN1Q8WXD9 1431 aa23.57■■□□□ 1.36
SERF1B-207ENST00000514285 PCF11O94913 1555 aaKnown RBP23.56■■□□□ 1.36
SERF1B-207ENST00000514285 CEP162Q5TB80 1403 aa23.54■■□□□ 1.36
SERF1B-207ENST00000514285 FYCO1Q9BQS8 1478 aa23.53■■□□□ 1.36
SERF1B-207ENST00000514285 CDK11AQ9UQ88 783 aaPredicted RBP23.52■■□□□ 1.36
SERF1B-207ENST00000514285 CCDC18Q5T9S5 1454 aa23.51■■□□□ 1.35
SERF1B-207ENST00000514285 COL17A1Q9UMD9 1497 aaPredicted RBP23.49■■□□□ 1.35
SERF1B-207ENST00000514285 LRRIQ1Q96JM4 1722 aa23.48■■□□□ 1.35
SERF1B-207ENST00000514285 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.48■■□□□ 1.35
SERF1B-207ENST00000514285 LOC105371045A0A1W2PR82 267 aa23.46■■□□□ 1.35
SERF1B-207ENST00000514285 PHLDB1Q86UU1 1377 aa23.46■■□□□ 1.35
SERF1B-207ENST00000514285 TTC37Q6PGP7 1564 aa23.45■■□□□ 1.34
SERF1B-207ENST00000514285 TROQ12816 1431 aaPredicted RBP23.45■■□□□ 1.34
SERF1B-207ENST00000514285 NEO1Q92859 1461 aa23.44■■□□□ 1.34
SERF1B-207ENST00000514285 KIF14Q15058 1648 aa23.42■■□□□ 1.34
SERF1B-207ENST00000514285 ARAP3Q8WWN8 1544 aa23.42■■□□□ 1.34
SERF1B-207ENST00000514285 CFAP74Q9C0B2 1584 aa23.38■■□□□ 1.33
SERF1B-207ENST00000514285 FANCAO15360 1455 aa23.36■■□□□ 1.33
SERF1B-207ENST00000514285 PLCH2O75038 1416 aa23.34■■□□□ 1.33
SERF1B-207ENST00000514285 MYO5CQ9NQX4 1742 aa23.32■■□□□ 1.32
SERF1B-207ENST00000514285 AKNAQ7Z591 1439 aa23.32■■□□□ 1.32
SERF1B-207ENST00000514285 VPS8Q8N3P4 1428 aa23.27■■□□□ 1.32
SERF1B-207ENST00000514285 DENND4BO75064 1496 aaPredicted RBP23.26■■□□□ 1.31
SERF1B-207ENST00000514285 FRMPD1Q5SYB0 1578 aa23.26■■□□□ 1.31
SERF1B-207ENST00000514285 RAPGEF3O95398 923 aa23.25■■□□□ 1.31
SERF1B-207ENST00000514285 EFCAB2Q5VUJ9 269 aa23.24■■□□□ 1.31
SERF1B-207ENST00000514285 MTUS2Q5JR59 1369 aa23.24■■□□□ 1.31
SERF1B-207ENST00000514285 ADGRL1O94910 1474 aa23.24■■□□□ 1.31
SERF1B-207ENST00000514285 ARHGAP5Q13017 1502 aa23.23■■□□□ 1.31
SERF1B-207ENST00000514285 PREX2Q70Z35 1606 aa23.22■■□□□ 1.31
SERF1B-207ENST00000514285 RICTORQ6R327 1708 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms