RNA–Protein interactions for RNA: ENST00000514152.5

SH3D19-210, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SH3D19, Length 5,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-210ENST00000514152 NCBP3Q53F19 620 aaKnown RBP9.6□□□□□ -0.87
SH3D19-210ENST00000514152 TMC1Q8TDI8 760 aa9.59□□□□□ -0.87
SH3D19-210ENST00000514152 CLIP1P30622 1438 aa9.59□□□□□ -0.87
SH3D19-210ENST00000514152 PABPN1Q86U42 306 aaKnown RBP eCLIP9.58□□□□□ -0.88
SH3D19-210ENST00000514152 EEA1Q15075 1411 aa9.58□□□□□ -0.88
SH3D19-210ENST00000514152 PRKCSHP14314 528 aaPredicted RBP9.58□□□□□ -0.88
SH3D19-210ENST00000514152 BECN1Q14457 450 aa9.58□□□□□ -0.88
SH3D19-210ENST00000514152 ARXQ96QS3 562 aa9.57□□□□□ -0.88
SH3D19-210ENST00000514152 PTMSP20962 102 aa9.57□□□□□ -0.88
SH3D19-210ENST00000514152 GOLGA3Q08378 1498 aa9.56□□□□□ -0.88
SH3D19-210ENST00000514152 ARID4BQ4LE39 1312 aaPredicted RBP9.56□□□□□ -0.88
SH3D19-210ENST00000514152 TRIM44Q96DX7 344 aaPredicted RBP9.56□□□□□ -0.88
SH3D19-210ENST00000514152 TNIKQ9UKE5 1360 aa9.55□□□□□ -0.88
SH3D19-210ENST00000514152 LAS1LQ9Y4W2 734 aaKnown RBP9.55□□□□□ -0.88
SH3D19-210ENST00000514152 CCER2I3L3R5 266 aa9.54□□□□□ -0.88
SH3D19-210ENST00000514152 NAP1L5Q96NT1 182 aaPredicted RBP9.54□□□□□ -0.88
SH3D19-210ENST00000514152 EIF4G2P78344 907 aaKnown RBP eCLIP9.53□□□□□ -0.88
SH3D19-210ENST00000514152 HIRIP3Q9BW71 556 aaPredicted RBP9.53□□□□□ -0.88
SH3D19-210ENST00000514152 TNNT2P45379 298 aaPredicted RBP9.52□□□□□ -0.88
SH3D19-210ENST00000514152 PLPPR3Q6T4P5 718 aa9.52□□□□□ -0.89
SH3D19-210ENST00000514152 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.51□□□□□ -0.89
SH3D19-210ENST00000514152 SALL2Q9Y467 1007 aaPredicted RBP9.51□□□□□ -0.89
SH3D19-210ENST00000514152 P3H3Q8IVL6 736 aa9.5□□□□□ -0.89
SH3D19-210ENST00000514152 B4GALNT3Q6L9W6 998 aa9.49□□□□□ -0.89
SH3D19-210ENST00000514152 RSF1Q96T23 1441 aaPredicted RBP9.47□□□□□ -0.89
SH3D19-210ENST00000514152 L1TD1Q5T7N2 865 aaKnown RBP9.47□□□□□ -0.89
SH3D19-210ENST00000514152 WDR43Q15061 677 aaKnown RBP eCLIP9.46□□□□□ -0.9
SH3D19-210ENST00000514152 GOLGA6L22H0YM25 854 aa9.45□□□□□ -0.9
SH3D19-210ENST00000514152 TIMELESSQ9UNS1 1208 aa9.44□□□□□ -0.9
SH3D19-210ENST00000514152 CEP164Q9UPV0 1460 aa9.43□□□□□ -0.9
SH3D19-210ENST00000514152 FANCIQ9NVI1 1328 aa9.43□□□□□ -0.9
SH3D19-210ENST00000514152 CFAP44Q96MT7 982 aa9.42□□□□□ -0.9
SH3D19-210ENST00000514152 IPO9Q96P70 1041 aaKnown RBP9.42□□□□□ -0.9
SH3D19-210ENST00000514152 RB1CC1Q8TDY2 1594 aa9.41□□□□□ -0.9
SH3D19-210ENST00000514152 ZBTB7CA1YPR0 619 aa9.4□□□□□ -0.9
SH3D19-210ENST00000514152 USP35Q9P2H5 1018 aa9.39□□□□□ -0.91
SH3D19-210ENST00000514152 RSPH6AQ9H0K4 717 aa9.38□□□□□ -0.91
SH3D19-210ENST00000514152 CHIC2Q9UKJ5 165 aa9.38□□□□□ -0.91
SH3D19-210ENST00000514152 MTUS2Q5JR59 1369 aa9.37□□□□□ -0.91
SH3D19-210ENST00000514152 SIN3AQ96ST3 1273 aa9.37□□□□□ -0.91
SH3D19-210ENST00000514152 TCERG1O14776 1098 aaKnown RBP9.37□□□□□ -0.91
SH3D19-210ENST00000514152 PTMAP06454 111 aaKnown RBP9.36□□□□□ -0.91
SH3D19-210ENST00000514152 NCLP19338 710 aaKnown RBP9.36□□□□□ -0.91
SH3D19-210ENST00000514152 CCNB3Q8WWL7 1395 aa9.36□□□□□ -0.91
SH3D19-210ENST00000514152 ZNF777Q9ULD5 760 aaPredicted RBP9.36□□□□□ -0.91
SH3D19-210ENST00000514152 DNTTIP2Q5QJE6 756 aaKnown RBP9.35□□□□□ -0.91
SH3D19-210ENST00000514152 PNNQ9H307 717 aaKnown RBP9.35□□□□□ -0.91
SH3D19-210ENST00000514152 CALRP27797 417 aaKnown RBP9.34□□□□□ -0.91
SH3D19-210ENST00000514152 RGS3P49796 1198 aa9.33□□□□□ -0.92
SH3D19-210ENST00000514152 ARID3CA6NKF2 412 aa9.33□□□□□ -0.92
SH3D19-210ENST00000514152 A0A0U1RQG5 324 aaPredicted RBP9.33□□□□□ -0.92
SH3D19-210ENST00000514152 WRNQ14191 1432 aaPredicted RBP eCLIP9.33□□□□□ -0.92
SH3D19-210ENST00000514152 VPS8Q8N3P4 1428 aa9.32□□□□□ -0.92
SH3D19-210ENST00000514152 MSNP26038 577 aaKnown RBP9.32□□□□□ -0.92
SH3D19-210ENST00000514152 MYH16Q9H6N6 1097 aa9.32□□□□□ -0.92
SH3D19-210ENST00000514152 SETD5Q9C0A6 1442 aa9.3□□□□□ -0.92
SH3D19-210ENST00000514152 ZNF526Q8TF50 670 aaPredicted RBP9.3□□□□□ -0.92
SH3D19-210ENST00000514152 RRP7BPQ9NSQ0 103 aa9.3□□□□□ -0.92
SH3D19-210ENST00000514152 KDM2AQ9Y2K7 1162 aa9.29□□□□□ -0.92
SH3D19-210ENST00000514152 HSP90AA2PQ14568 343 aaPredicted RBP9.28□□□□□ -0.92
SH3D19-210ENST00000514152 SENP3-EIF4A1A0A087X0R7 540 aa9.28□□□□□ -0.92
SH3D19-210ENST00000514152 HSCBQ8IWL3 235 aa9.28□□□□□ -0.92
SH3D19-210ENST00000514152 GSE1Q14687 1217 aa9.27□□□□□ -0.92
SH3D19-210ENST00000514152 HSP90AB1P08238 724 aaKnown RBP9.27□□□□□ -0.93
SH3D19-210ENST00000514152 GOLGA6L3A6NEY3 463 aa9.27□□□□□ -0.93
SH3D19-210ENST00000514152 NUDCQ9Y266 331 aa9.27□□□□□ -0.93
SH3D19-210ENST00000514152 HSPA5P11021 654 aaKnown RBP9.25□□□□□ -0.93
SH3D19-210ENST00000514152 TAOK2Q9UL54 1235 aa9.25□□□□□ -0.93
SH3D19-210ENST00000514152 SOGA1O94964 1423 aa9.25□□□□□ -0.93
SH3D19-210ENST00000514152 CHAF1AQ13111 956 aaPredicted RBP9.24□□□□□ -0.93
SH3D19-210ENST00000514152 CASC1Q6TDU7 716 aa9.24□□□□□ -0.93
SH3D19-210ENST00000514152 CARD11Q9BXL7 1154 aa9.24□□□□□ -0.93
SH3D19-210ENST00000514152 VSIG10Q8N0Z9 540 aa9.24□□□□□ -0.93
SH3D19-210ENST00000514152 RCAN3Q9UKA8 241 aa9.24□□□□□ -0.93
SH3D19-210ENST00000514152 FTSJ3Q8IY81 847 aaKnown RBP9.24□□□□□ -0.93
SH3D19-210ENST00000514152 RAB3GAP2Q9H2M9 1393 aa9.24□□□□□ -0.93
SH3D19-210ENST00000514152 KNSTRNQ9Y448 316 aa9.23□□□□□ -0.93
SH3D19-210ENST00000514152 DHX57Q6P158 1386 aaKnown RBP9.23□□□□□ -0.93
SH3D19-210ENST00000514152 KCNH8Q96L42 1107 aa9.23□□□□□ -0.93
SH3D19-210ENST00000514152 CDCA8Q53HL2 280 aa9.22□□□□□ -0.93
SH3D19-210ENST00000514152 CECR2Q9BXF3 1484 aa9.22□□□□□ -0.93
SH3D19-210ENST00000514152 KCNA4P22459 653 aa9.22□□□□□ -0.93
SH3D19-210ENST00000514152 GBP4Q96PP9 640 aa9.22□□□□□ -0.93
SH3D19-210ENST00000514152 MS4A1P11836 297 aa9.22□□□□□ -0.93
SH3D19-210ENST00000514152 KIF27Q86VH2 1401 aa9.22□□□□□ -0.93
SH3D19-210ENST00000514152 PPP1R15AO75807 674 aaPredicted RBP9.21□□□□□ -0.93
SH3D19-210ENST00000514152 TSPY4P0CV99 314 aa9.21□□□□□ -0.94
SH3D19-210ENST00000514152 TSPY10P0CW01 314 aa9.21□□□□□ -0.94
SH3D19-210ENST00000514152 FHAD1B1AJZ9 1412 aa9.2□□□□□ -0.94
SH3D19-210ENST00000514152 CCDC9Q9Y3X0 531 aaKnown RBP9.2□□□□□ -0.94
SH3D19-210ENST00000514152 KLHL34Q8N239 644 aa9.19□□□□□ -0.94
SH3D19-210ENST00000514152 SLKQ9H2G2 1235 aaPredicted RBP9.19□□□□□ -0.94
SH3D19-210ENST00000514152 PDE4AP27815 886 aa9.19□□□□□ -0.94
SH3D19-210ENST00000514152 LMOD2Q6P5Q4 547 aa9.19□□□□□ -0.94
SH3D19-210ENST00000514152 GZF1Q9H116 711 aaPredicted RBP9.19□□□□□ -0.94
SH3D19-210ENST00000514152 CFAP53Q96M91 514 aa9.19□□□□□ -0.94
SH3D19-210ENST00000514152 CHMP4BQ9H444 224 aaKnown RBP9.19□□□□□ -0.94
SH3D19-210ENST00000514152 FRAT1Q92837 279 aaPredicted RBP9.18□□□□□ -0.94
SH3D19-210ENST00000514152 ANO8Q9HCE9 1232 aaPredicted RBP9.18□□□□□ -0.94
SH3D19-210ENST00000514152 ZBED9Q6R2W3 1325 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms