RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 KIF27Q86VH2 1401 aa21.38■■□□□ 1.01
SNHG4-208ENST00000514110 CUL7Q14999 1698 aa21.34■■□□□ 1.01
SNHG4-208ENST00000514110 KIAA0586Q9BVV6 1533 aa21.29■■□□□ 1
SNHG4-208ENST00000514110 CARMIL1Q5VZK9 1371 aa21.24■□□□□ 0.99
SNHG4-208ENST00000514110 KIF13AQ9H1H9 1805 aa21.22■□□□□ 0.99
SNHG4-208ENST00000514110 ADCY10Q96PN6 1610 aa21.2■□□□□ 0.98
SNHG4-208ENST00000514110 NPM1P06748 294 aaKnown RBP eCLIP21.16■□□□□ 0.98
SNHG4-208ENST00000514110 MAPKBP1O60336 1514 aa21.15■□□□□ 0.98
SNHG4-208ENST00000514110 ABCC10Q5T3U5 1492 aa21.13■□□□□ 0.97
SNHG4-208ENST00000514110 FAM69CQ0P6D2 419 aa21.11■□□□□ 0.97
SNHG4-208ENST00000514110 IQGAP2Q13576 1575 aa21.1■□□□□ 0.97
SNHG4-208ENST00000514110 PTPRGP23470 1445 aa21.1■□□□□ 0.97
SNHG4-208ENST00000514110 DIP2BQ9P265 1576 aa21.09■□□□□ 0.97
SNHG4-208ENST00000514110 TTBK1Q5TCY1 1321 aaPredicted RBP21.07■□□□□ 0.96
SNHG4-208ENST00000514110 CARMIL2Q6F5E8 1435 aa21.07■□□□□ 0.96
SNHG4-208ENST00000514110 TNIKQ9UKE5 1360 aa21.06■□□□□ 0.96
SNHG4-208ENST00000514110 RAPGEF2Q9Y4G8 1499 aa21.05■□□□□ 0.96
SNHG4-208ENST00000514110 AEBP2Q6ZN18 517 aaPredicted RBP21.04■□□□□ 0.96
SNHG4-208ENST00000514110 DISP1Q96F81 1524 aa21.02■□□□□ 0.96
SNHG4-208ENST00000514110 ABCC2Q92887 1545 aa20.99■□□□□ 0.95
SNHG4-208ENST00000514110 UGGT2Q9NYU1 1516 aa20.97■□□□□ 0.95
SNHG4-208ENST00000514110 UHRF1BP1LA0JNW5 1464 aa20.95■□□□□ 0.94
SNHG4-208ENST00000514110 UACAQ9BZF9 1416 aa20.94■□□□□ 0.94
SNHG4-208ENST00000514110 TSPOAP1O95153 1857 aa20.93■□□□□ 0.94
SNHG4-208ENST00000514110 ASXL2Q76L83 1435 aa20.92■□□□□ 0.94
SNHG4-208ENST00000514110 KIAA0556O60303 1618 aa20.92■□□□□ 0.94
SNHG4-208ENST00000514110 KDM6BO15054 1643 aa20.89■□□□□ 0.93
SNHG4-208ENST00000514110 PLB1Q6P1J6 1458 aa20.88■□□□□ 0.93
SNHG4-208ENST00000514110 CTTNBP2Q8WZ74 1663 aa20.88■□□□□ 0.93
SNHG4-208ENST00000514110 KDM5BQ9UGL1 1544 aa20.86■□□□□ 0.93
SNHG4-208ENST00000514110 PRXQ9BXM0 1461 aa20.85■□□□□ 0.93
SNHG4-208ENST00000514110 GLI2P10070 1586 aa20.85■□□□□ 0.93
SNHG4-208ENST00000514110 ZCCHC11Q5TAX3 1644 aaKnown RBP20.82■□□□□ 0.92
SNHG4-208ENST00000514110 PPRC1Q5VV67 1664 aaKnown RBP20.82■□□□□ 0.92
SNHG4-208ENST00000514110 EPRSP07814 1512 aaKnown RBP20.79■□□□□ 0.92
SNHG4-208ENST00000514110 GOLGA3Q08378 1498 aa20.78■□□□□ 0.92
SNHG4-208ENST00000514110 MAP3K4Q9Y6R4 1608 aa20.75■□□□□ 0.91
SNHG4-208ENST00000514110 ABCA8O94911 1581 aa20.73■□□□□ 0.91
SNHG4-208ENST00000514110 WDR7Q9Y4E6 1490 aa20.71■□□□□ 0.91
SNHG4-208ENST00000514110 KDM4FA0A1W2PPD8 638 aa20.69■□□□□ 0.9
SNHG4-208ENST00000514110 COL17A1Q9UMD9 1497 aaPredicted RBP20.69■□□□□ 0.9
SNHG4-208ENST00000514110 CSRNP3Q8WYN3 585 aa20.68■□□□□ 0.9
SNHG4-208ENST00000514110 TEX14Q8IWB6 1497 aa20.65■□□□□ 0.9
SNHG4-208ENST00000514110 P3H3Q8IVL6 736 aa20.65■□□□□ 0.9
SNHG4-208ENST00000514110 KCNH8Q96L42 1107 aa20.61■□□□□ 0.89
SNHG4-208ENST00000514110 SAMD9Q5K651 1589 aa20.59■□□□□ 0.89
SNHG4-208ENST00000514110 CD109Q6YHK3 1445 aa20.59■□□□□ 0.89
SNHG4-208ENST00000514110 ARID3CA6NKF2 412 aa20.58■□□□□ 0.89
SNHG4-208ENST00000514110 CFAP43Q8NDM7 1665 aa20.58■□□□□ 0.88
SNHG4-208ENST00000514110 EEA1Q15075 1411 aa20.57■□□□□ 0.88
SNHG4-208ENST00000514110 ATP10BO94823 1461 aa20.56■□□□□ 0.88
SNHG4-208ENST00000514110 MAGI3Q5TCQ9 1506 aa20.56■□□□□ 0.88
SNHG4-208ENST00000514110 FAM9AQ8IZU1 332 aaPredicted RBP20.54■□□□□ 0.88
SNHG4-208ENST00000514110 ADGRL1O94910 1474 aa20.52■□□□□ 0.88
SNHG4-208ENST00000514110 RAPGEF6Q8TEU7 1601 aa20.5■□□□□ 0.87
SNHG4-208ENST00000514110 RANGAP1P46060 587 aaPredicted RBP20.5■□□□□ 0.87
SNHG4-208ENST00000514110 FHOD3Q2V2M9 1422 aa20.46■□□□□ 0.87
SNHG4-208ENST00000514110 NUP153P49790 1475 aaKnown RBP20.44■□□□□ 0.86
SNHG4-208ENST00000514110 KIF21BO75037 1637 aa20.44■□□□□ 0.86
SNHG4-208ENST00000514110 ABCA9Q8IUA7 1624 aa20.44■□□□□ 0.86
SNHG4-208ENST00000514110 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.41■□□□□ 0.86
SNHG4-208ENST00000514110 HNRNPUL2Q1KMD3 747 aaKnown RBP20.41■□□□□ 0.86
SNHG4-208ENST00000514110 ARAP3Q8WWN8 1544 aa20.41■□□□□ 0.86
SNHG4-208ENST00000514110 EFCAB5A4FU69 1503 aa20.37■□□□□ 0.85
SNHG4-208ENST00000514110 CHIC1Q5VXU3 224 aa20.34■□□□□ 0.85
SNHG4-208ENST00000514110 EHMT2Q96KQ7 1210 aa20.33■□□□□ 0.85
SNHG4-208ENST00000514110 PHLDB1Q86UU1 1377 aa20.33■□□□□ 0.84
SNHG4-208ENST00000514110 NEO1Q92859 1461 aa20.32■□□□□ 0.84
SNHG4-208ENST00000514110 RAPGEF3O95398 923 aa20.31■□□□□ 0.84
SNHG4-208ENST00000514110 PLEKHD1A6NEE1 506 aa20.3■□□□□ 0.84
SNHG4-208ENST00000514110 UBTFP17480 764 aaKnown RBP20.28■□□□□ 0.84
SNHG4-208ENST00000514110 FRMPD1Q5SYB0 1578 aa20.26■□□□□ 0.83
SNHG4-208ENST00000514110 CDK13Q14004 1512 aaKnown RBP20.25■□□□□ 0.83
SNHG4-208ENST00000514110 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.25■□□□□ 0.832e-37■□□□□ 9.1
SNHG4-208ENST00000514110 HECW2Q9P2P5 1572 aa20.24■□□□□ 0.83
SNHG4-208ENST00000514110 TTC37Q6PGP7 1564 aa20.22■□□□□ 0.83
SNHG4-208ENST00000514110 ARHGAP35Q9NRY4 1499 aa20.22■□□□□ 0.83
SNHG4-208ENST00000514110 AKNAQ7Z591 1439 aa20.19■□□□□ 0.82
SNHG4-208ENST00000514110 FANCAO15360 1455 aa20.19■□□□□ 0.82
SNHG4-208ENST00000514110 FMN1Q68DA7 1419 aa20.19■□□□□ 0.82
SNHG4-208ENST00000514110 DENND4BO75064 1496 aaPredicted RBP20.18■□□□□ 0.82
SNHG4-208ENST00000514110 CFAP74Q9C0B2 1584 aa20.17■□□□□ 0.82
SNHG4-208ENST00000514110 ADAMTSL3P82987 1691 aa20.17■□□□□ 0.82
SNHG4-208ENST00000514110 RICTORQ6R327 1708 aa20.17■□□□□ 0.82
SNHG4-208ENST00000514110 ATP1B4Q9UN42 357 aaPredicted RBP20.17■□□□□ 0.82
SNHG4-208ENST00000514110 HECW1Q76N89 1606 aa20.16■□□□□ 0.82
SNHG4-208ENST00000514110 ARHGEF40Q8TER5 1519 aa20.14■□□□□ 0.81
SNHG4-208ENST00000514110 BCORL1Q5H9F3 1711 aa20.13■□□□□ 0.81
SNHG4-208ENST00000514110 PTPRMP28827 1452 aa20.11■□□□□ 0.81
SNHG4-208ENST00000514110 PLCH2O75038 1416 aa20.11■□□□□ 0.81
SNHG4-208ENST00000514110 ARID4BQ4LE39 1312 aaPredicted RBP20.11■□□□□ 0.81
SNHG4-208ENST00000514110 ZMYM4Q5VZL5 1548 aa20.09■□□□□ 0.81
SNHG4-208ENST00000514110 MADDQ8WXG6 1647 aa20.09■□□□□ 0.81
SNHG4-208ENST00000514110 LRRIQ1Q96JM4 1722 aa20.08■□□□□ 0.81
SNHG4-208ENST00000514110 KIF14Q15058 1648 aa20.08■□□□□ 0.8
SNHG4-208ENST00000514110 YEATS2Q9ULM3 1422 aa20.07■□□□□ 0.8
SNHG4-208ENST00000514110 SCAPERQ9BY12 1400 aa20.06■□□□□ 0.8
SNHG4-208ENST00000514110 CDK11AQ9UQ88 783 aaPredicted RBP20.06■□□□□ 0.8
SNHG4-208ENST00000514110 ZFYVE16Q7Z3T8 1539 aa20.06■□□□□ 0.8
SNHG4-208ENST00000514110 MYO5CQ9NQX4 1742 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms