RNA–Protein interactions for RNA: ENST00000514089.5

SNF8-212, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-212ENST00000514089 ARHGEF11O15085 1522 aa23.87■■□□□ 1.41
SNF8-212ENST00000514089 KIAA0586Q9BVV6 1533 aa23.86■■□□□ 1.41
SNF8-212ENST00000514089 PRXQ9BXM0 1461 aa23.86■■□□□ 1.41
SNF8-212ENST00000514089 PRG4Q92954 1404 aaPredicted RBP23.82■■□□□ 1.4
SNF8-212ENST00000514089 UBTFP17480 764 aaKnown RBP23.81■■□□□ 1.4
SNF8-212ENST00000514089 RIMBP3CA6NJZ7 1639 aa23.78■■□□□ 1.4
SNF8-212ENST00000514089 RIMBP3BA6NNM3 1639 aa23.78■■□□□ 1.4
SNF8-212ENST00000514089 RIMBP3Q9UFD9 1639 aa23.78■■□□□ 1.4
SNF8-212ENST00000514089 TTBK1Q5TCY1 1321 aaPredicted RBP23.78■■□□□ 1.4
SNF8-212ENST00000514089 RANGAP1P46060 587 aaPredicted RBP23.75■■□□□ 1.39
SNF8-212ENST00000514089 CARMIL2Q6F5E8 1435 aa23.72■■□□□ 1.39
SNF8-212ENST00000514089 ARAP1Q96P48 1450 aa23.68■■□□□ 1.38
SNF8-212ENST00000514089 IQGAP2Q13576 1575 aa23.67■■□□□ 1.38
SNF8-212ENST00000514089 ERCC6L2Q5T890 1561 aa23.63■■□□□ 1.37
SNF8-212ENST00000514089 SHROOM2Q13796 1616 aa23.62■■□□□ 1.37
SNF8-212ENST00000514089 P3H3Q8IVL6 736 aa23.62■■□□□ 1.37
SNF8-212ENST00000514089 GOLGA3Q08378 1498 aa23.62■■□□□ 1.37
SNF8-212ENST00000514089 PTPRGP23470 1445 aa23.61■■□□□ 1.37
SNF8-212ENST00000514089 TNIKQ9UKE5 1360 aa23.6■■□□□ 1.37
SNF8-212ENST00000514089 NPM1P06748 294 aaKnown RBP eCLIP23.59■■□□□ 1.37
SNF8-212ENST00000514089 KIF21BO75037 1637 aa23.58■■□□□ 1.36
SNF8-212ENST00000514089 UGGT2Q9NYU1 1516 aa23.54■■□□□ 1.36
SNF8-212ENST00000514089 DISP1Q96F81 1524 aa23.5■■□□□ 1.35
SNF8-212ENST00000514089 TRHP20396 242 aaPredicted RBP23.48■■□□□ 1.35
SNF8-212ENST00000514089 CTTNBP2Q8WZ74 1663 aa23.46■■□□□ 1.35
SNF8-212ENST00000514089 LOC105371045A0A1W2PR82 267 aa23.43■■□□□ 1.34
SNF8-212ENST00000514089 KIAA0556O60303 1618 aa23.4■■□□□ 1.34
SNF8-212ENST00000514089 UACAQ9BZF9 1416 aa23.39■■□□□ 1.33
SNF8-212ENST00000514089 ATP1B4Q9UN42 357 aaPredicted RBP23.35■■□□□ 1.33
SNF8-212ENST00000514089 FHOD3Q2V2M9 1422 aa23.33■■□□□ 1.33
SNF8-212ENST00000514089 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.33■■□□□ 1.33
SNF8-212ENST00000514089 HNRNPUL2Q1KMD3 747 aaKnown RBP23.33■■□□□ 1.33
SNF8-212ENST00000514089 ARID3CA6NKF2 412 aa23.32■■□□□ 1.32
SNF8-212ENST00000514089 PLB1Q6P1J6 1458 aa23.29■■□□□ 1.32
SNF8-212ENST00000514089 EFCAB5A4FU69 1503 aa23.28■■□□□ 1.32
SNF8-212ENST00000514089 UHRF1BP1LA0JNW5 1464 aa23.26■■□□□ 1.31
SNF8-212ENST00000514089 CLIP1P30622 1438 aa23.25■■□□□ 1.31
SNF8-212ENST00000514089 SAMD9Q5K651 1589 aa23.25■■□□□ 1.31
SNF8-212ENST00000514089 ABCC2Q92887 1545 aa23.24■■□□□ 1.31
SNF8-212ENST00000514089 ARHGAP35Q9NRY4 1499 aa23.22■■□□□ 1.31
SNF8-212ENST00000514089 ADCY10Q96PN6 1610 aa23.22■■□□□ 1.31
SNF8-212ENST00000514089 FAM69CQ0P6D2 419 aa23.21■■□□□ 1.31
SNF8-212ENST00000514089 FMN1Q68DA7 1419 aa23.2■■□□□ 1.3
SNF8-212ENST00000514089 KCNH8Q96L42 1107 aa23.16■■□□□ 1.3
SNF8-212ENST00000514089 CEP162Q5TB80 1403 aa23.15■■□□□ 1.3
SNF8-212ENST00000514089 ABCA8O94911 1581 aa23.14■■□□□ 1.3
SNF8-212ENST00000514089 KDM5BQ9UGL1 1544 aa23.13■■□□□ 1.29
SNF8-212ENST00000514089 ASXL2Q76L83 1435 aa23.13■■□□□ 1.29
SNF8-212ENST00000514089 PLEKHD1A6NEE1 506 aa23.12■■□□□ 1.29
SNF8-212ENST00000514089 CDK11AQ9UQ88 783 aaPredicted RBP23.09■■□□□ 1.29
SNF8-212ENST00000514089 MAPKBP1O60336 1514 aa23.08■■□□□ 1.29
SNF8-212ENST00000514089 ATP10BO94823 1461 aa23.08■■□□□ 1.29
SNF8-212ENST00000514089 RAPGEF6Q8TEU7 1601 aa23.06■■□□□ 1.28
SNF8-212ENST00000514089 ABCC10Q5T3U5 1492 aa23.05■■□□□ 1.28
SNF8-212ENST00000514089 NUP153P49790 1475 aaKnown RBP23.04■■□□□ 1.28
SNF8-212ENST00000514089 ZCCHC11Q5TAX3 1644 aaKnown RBP23■■□□□ 1.27
SNF8-212ENST00000514089 WDR7Q9Y4E6 1490 aa23■■□□□ 1.27
SNF8-212ENST00000514089 CASKIN1Q8WXD9 1431 aa22.99■■□□□ 1.27
SNF8-212ENST00000514089 EPRSP07814 1512 aaKnown RBP22.94■■□□□ 1.26
SNF8-212ENST00000514089 HECW1Q76N89 1606 aa22.92■■□□□ 1.26
SNF8-212ENST00000514089 APLP2Q06481 763 aa22.91■■□□□ 1.26
SNF8-212ENST00000514089 CDK13Q14004 1512 aaKnown RBP22.9■■□□□ 1.26
SNF8-212ENST00000514089 FYCO1Q9BQS8 1478 aa22.89■■□□□ 1.25
SNF8-212ENST00000514089 DIP2BQ9P265 1576 aa22.89■■□□□ 1.25
SNF8-212ENST00000514089 CD109Q6YHK3 1445 aa22.88■■□□□ 1.25
SNF8-212ENST00000514089 CCDC18Q5T9S5 1454 aa22.86■■□□□ 1.25
SNF8-212ENST00000514089 VPS8Q8N3P4 1428 aa22.84■■□□□ 1.25
SNF8-212ENST00000514089 PCF11O94913 1555 aaKnown RBP22.84■■□□□ 1.25
SNF8-212ENST00000514089 GLI2P10070 1586 aa22.83■■□□□ 1.25
SNF8-212ENST00000514089 MTUS2Q5JR59 1369 aa22.79■■□□□ 1.24
SNF8-212ENST00000514089 TROQ12816 1431 aaPredicted RBP22.79■■□□□ 1.24
SNF8-212ENST00000514089 TEX14Q8IWB6 1497 aa22.77■■□□□ 1.24
SNF8-212ENST00000514089 KIF13AQ9H1H9 1805 aa22.74■■□□□ 1.23
SNF8-212ENST00000514089 EFCAB2Q5VUJ9 269 aa22.7■■□□□ 1.22
SNF8-212ENST00000514089 MAGI3Q5TCQ9 1506 aa22.69■■□□□ 1.22
SNF8-212ENST00000514089 TSPOAP1O95153 1857 aa22.66■■□□□ 1.22
SNF8-212ENST00000514089 MAP3K4Q9Y6R4 1608 aa22.66■■□□□ 1.22
SNF8-212ENST00000514089 PHLDB1Q86UU1 1377 aa22.65■■□□□ 1.22
SNF8-212ENST00000514089 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.65■■□□□ 1.22
SNF8-212ENST00000514089 ZNF777Q9ULD5 760 aaPredicted RBP22.64■■□□□ 1.21
SNF8-212ENST00000514089 PLCH2O75038 1416 aa22.64■■□□□ 1.21
SNF8-212ENST00000514089 ABCA9Q8IUA7 1624 aa22.64■■□□□ 1.21
SNF8-212ENST00000514089 CFAP43Q8NDM7 1665 aa22.63■■□□□ 1.21
SNF8-212ENST00000514089 KANK4Q5T7N3 995 aaPredicted RBP22.63■■□□□ 1.21
SNF8-212ENST00000514089 KIF14Q15058 1648 aa22.63■■□□□ 1.21
SNF8-212ENST00000514089 CCNB3Q8WWL7 1395 aa22.63■■□□□ 1.21
SNF8-212ENST00000514089 CFDP1Q9UEE9 299 aaPredicted RBP22.62■■□□□ 1.21
SNF8-212ENST00000514089 FANCAO15360 1455 aa22.6■■□□□ 1.21
SNF8-212ENST00000514089 RAPGEF3O95398 923 aa22.58■■□□□ 1.21
SNF8-212ENST00000514089 NEO1Q92859 1461 aa22.58■■□□□ 1.2
SNF8-212ENST00000514089 AKNAQ7Z591 1439 aa22.57■■□□□ 1.2
SNF8-212ENST00000514089 LRRIQ1Q96JM4 1722 aa22.57■■□□□ 1.2
SNF8-212ENST00000514089 MYT1LQ9UL68 1186 aa22.56■■□□□ 1.2
SNF8-212ENST00000514089 KDM6BO15054 1643 aa22.56■■□□□ 1.2
SNF8-212ENST00000514089 TIAM1Q13009 1591 aa22.55■■□□□ 1.2
SNF8-212ENST00000514089 TTC37Q6PGP7 1564 aa22.55■■□□□ 1.2
SNF8-212ENST00000514089 LRRC9Q6ZRR7 1453 aa22.55■■□□□ 1.2
SNF8-212ENST00000514089 ARHGAP5Q13017 1502 aa22.55■■□□□ 1.2
SNF8-212ENST00000514089 EHBP1L1Q8N3D4 1523 aa22.55■■□□□ 1.2
SNF8-212ENST00000514089 MAP3K1Q13233 1512 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms