RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 EEA1Q15075 1411 aa12.71□□□□□ -0.37
HMGXB3-204ENST00000513318 RUSC2Q8N2Y8 1516 aa12.7□□□□□ -0.38
HMGXB3-204ENST00000513318 SYNJ2O15056 1496 aa12.69□□□□□ -0.38
HMGXB3-204ENST00000513318 FHAD1B1AJZ9 1412 aa12.67□□□□□ -0.38
HMGXB3-204ENST00000513318 IGF1RP08069 1367 aa12.65□□□□□ -0.38
HMGXB3-204ENST00000513318 GRIN2AQ12879 1464 aa12.64□□□□□ -0.39
HMGXB3-204ENST00000513318 CTTNBP2Q8WZ74 1663 aa12.62□□□□□ -0.39
HMGXB3-204ENST00000513318 SLC4A1APQ9BWU0 796 aaKnown RBP12.62□□□□□ -0.39
HMGXB3-204ENST00000513318 KIF21BO75037 1637 aa12.62□□□□□ -0.39
HMGXB3-204ENST00000513318 CARMIL1Q5VZK9 1371 aa12.61□□□□□ -0.39
HMGXB3-204ENST00000513318 PRXQ9BXM0 1461 aa12.59□□□□□ -0.39
HMGXB3-204ENST00000513318 RAPGEF2Q9Y4G8 1499 aa12.59□□□□□ -0.39
HMGXB3-204ENST00000513318 CHMP7Q8WUX9 453 aaPredicted RBP12.59□□□□□ -0.39
HMGXB3-204ENST00000513318 CEP170Q5SW79 1584 aa12.59□□□□□ -0.39
HMGXB3-204ENST00000513318 DCAF8L1A6NGE4 600 aa12.57□□□□□ -0.4
HMGXB3-204ENST00000513318 CSRNP3Q8WYN3 585 aa12.57□□□□□ -0.4
HMGXB3-204ENST00000513318 CLASP1Q7Z460 1538 aa12.57□□□□□ -0.4
HMGXB3-204ENST00000513318 NUP160Q12769 1436 aa12.56□□□□□ -0.4
HMGXB3-204ENST00000513318 FBLN2P98095 1184 aa12.56□□□□□ -0.4
HMGXB3-204ENST00000513318 FAM9AQ8IZU1 332 aaPredicted RBP12.55□□□□□ -0.4
HMGXB3-204ENST00000513318 OSCARQ8IYS5 282 aa12.52□□□□□ -0.41
HMGXB3-204ENST00000513318 SHROOM2Q13796 1616 aa12.51□□□□□ -0.41
HMGXB3-204ENST00000513318 IQGAP2Q13576 1575 aa12.51□□□□□ -0.41
HMGXB3-204ENST00000513318 GOLGA3Q08378 1498 aa12.5□□□□□ -0.41
HMGXB3-204ENST00000513318 KIAA0586Q9BVV6 1533 aa12.48□□□□□ -0.41
HMGXB3-204ENST00000513318 RIMBP3CA6NJZ7 1639 aa12.42□□□□□ -0.42
HMGXB3-204ENST00000513318 RIMBP3BA6NNM3 1639 aa12.42□□□□□ -0.42
HMGXB3-204ENST00000513318 RIMBP3Q9UFD9 1639 aa12.42□□□□□ -0.42
HMGXB3-204ENST00000513318 UGGT2Q9NYU1 1516 aa12.42□□□□□ -0.42
HMGXB3-204ENST00000513318 ARHGEF11O15085 1522 aa12.41□□□□□ -0.42
HMGXB3-204ENST00000513318 KIAA0556O60303 1618 aa12.39□□□□□ -0.43
HMGXB3-204ENST00000513318 SAMD9Q5K651 1589 aa12.39□□□□□ -0.43
HMGXB3-204ENST00000513318 ERCC6L2Q5T890 1561 aa12.37□□□□□ -0.43
HMGXB3-204ENST00000513318 UBTFP17480 764 aaKnown RBP12.36□□□□□ -0.43
HMGXB3-204ENST00000513318 JPH4Q96JJ6 628 aa12.36□□□□□ -0.43
HMGXB3-204ENST00000513318 DNAJC5Q9H3Z4 198 aa12.36□□□□□ -0.43
HMGXB3-204ENST00000513318 EFCAB5A4FU69 1503 aa12.36□□□□□ -0.43
HMGXB3-204ENST00000513318 PRG4Q92954 1404 aaPredicted RBP12.36□□□□□ -0.43
HMGXB3-204ENST00000513318 SLC4A2P04920 1241 aa12.35□□□□□ -0.43
HMGXB3-204ENST00000513318 DISP1Q96F81 1524 aa12.35□□□□□ -0.43
HMGXB3-204ENST00000513318 EHMT2Q96KQ7 1210 aa12.34□□□□□ -0.43
HMGXB3-204ENST00000513318 CARMIL2Q6F5E8 1435 aa12.34□□□□□ -0.43
HMGXB3-204ENST00000513318 TNIKQ9UKE5 1360 aa12.33□□□□□ -0.44
HMGXB3-204ENST00000513318 ARAP1Q96P48 1450 aa12.31□□□□□ -0.44
HMGXB3-204ENST00000513318 ARHGAP35Q9NRY4 1499 aa12.27□□□□□ -0.44
HMGXB3-204ENST00000513318 ZBTB22O15209 634 aa12.26□□□□□ -0.45
HMGXB3-204ENST00000513318 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.26□□□□□ -0.45
HMGXB3-204ENST00000513318 LOC105371045A0A1W2PR82 267 aa12.25□□□□□ -0.45
HMGXB3-204ENST00000513318 CLIP1P30622 1438 aa12.25□□□□□ -0.45
HMGXB3-204ENST00000513318 CEP162Q5TB80 1403 aa12.25□□□□□ -0.45
HMGXB3-204ENST00000513318 FHOD3Q2V2M9 1422 aa12.23□□□□□ -0.45
HMGXB3-204ENST00000513318 RAPGEF6Q8TEU7 1601 aa12.22□□□□□ -0.45
HMGXB3-204ENST00000513318 ADCY10Q96PN6 1610 aa12.22□□□□□ -0.45
HMGXB3-204ENST00000513318 PTPRGP23470 1445 aa12.22□□□□□ -0.45
HMGXB3-204ENST00000513318 RANGAP1P46060 587 aaPredicted RBP12.22□□□□□ -0.45
HMGXB3-204ENST00000513318 ABCA8O94911 1581 aa12.22□□□□□ -0.45
HMGXB3-204ENST00000513318 ABCC2Q92887 1545 aa12.2□□□□□ -0.46
HMGXB3-204ENST00000513318 FOXD4L1Q9NU39 408 aa12.19□□□□□ -0.46
HMGXB3-204ENST00000513318 FMN1Q68DA7 1419 aa12.19□□□□□ -0.46
HMGXB3-204ENST00000513318 HECW1Q76N89 1606 aa12.19□□□□□ -0.46
HMGXB3-204ENST00000513318 P3H3Q8IVL6 736 aa12.18□□□□□ -0.46
HMGXB3-204ENST00000513318 UHRF1BP1LA0JNW5 1464 aa12.18□□□□□ -0.46
HMGXB3-204ENST00000513318 PCF11O94913 1555 aaKnown RBP12.18□□□□□ -0.46
HMGXB3-204ENST00000513318 LRRIQ1Q96JM4 1722 aa12.17□□□□□ -0.46
HMGXB3-204ENST00000513318 PLB1Q6P1J6 1458 aa12.17□□□□□ -0.46
HMGXB3-204ENST00000513318 CYB5RLQ6IPT4 315 aa12.17□□□□□ -0.46
HMGXB3-204ENST00000513318 UACAQ9BZF9 1416 aa12.17□□□□□ -0.46
HMGXB3-204ENST00000513318 ZCCHC11Q5TAX3 1644 aaKnown RBP12.16□□□□□ -0.46
HMGXB3-204ENST00000513318 TTBK1Q5TCY1 1321 aaPredicted RBP12.15□□□□□ -0.46
HMGXB3-204ENST00000513318 FYCO1Q9BQS8 1478 aa12.13□□□□□ -0.47
HMGXB3-204ENST00000513318 KDM5BQ9UGL1 1544 aa12.12□□□□□ -0.47
HMGXB3-204ENST00000513318 RNF39Q9H2S5 420 aa12.12□□□□□ -0.47
HMGXB3-204ENST00000513318 NUP153P49790 1475 aaKnown RBP12.11□□□□□ -0.47
HMGXB3-204ENST00000513318 U3KPZ7 1027 aaPredicted RBP12.11□□□□□ -0.47
HMGXB3-204ENST00000513318 VPS8Q8N3P4 1428 aa12.11□□□□□ -0.47
HMGXB3-204ENST00000513318 CASKIN1Q8WXD9 1431 aa12.11□□□□□ -0.47
HMGXB3-204ENST00000513318 MAPKBP1O60336 1514 aa12.1□□□□□ -0.47
HMGXB3-204ENST00000513318 CFAP43Q8NDM7 1665 aa12.1□□□□□ -0.47
HMGXB3-204ENST00000513318 CCDC18Q5T9S5 1454 aa12.08□□□□□ -0.48
HMGXB3-204ENST00000513318 EPRSP07814 1512 aaKnown RBP12.07□□□□□ -0.48
HMGXB3-204ENST00000513318 KIF13AQ9H1H9 1805 aa12.07□□□□□ -0.48
HMGXB3-204ENST00000513318 ATP10BO94823 1461 aa12.06□□□□□ -0.48
HMGXB3-204ENST00000513318 CDK13Q14004 1512 aaKnown RBP12.06□□□□□ -0.48
HMGXB3-204ENST00000513318 NPM1P06748 294 aaKnown RBP eCLIP12.05□□□□□ -0.48
HMGXB3-204ENST00000513318 WDR7Q9Y4E6 1490 aa12.02□□□□□ -0.48
HMGXB3-204ENST00000513318 TIAM1Q13009 1591 aa12.02□□□□□ -0.49
HMGXB3-204ENST00000513318 DIP2BQ9P265 1576 aa12.02□□□□□ -0.49
HMGXB3-204ENST00000513318 ASXL2Q76L83 1435 aa12.02□□□□□ -0.49
HMGXB3-204ENST00000513318 MYCNP04198 464 aaPredicted RBP12.01□□□□□ -0.49
HMGXB3-204ENST00000513318 MAP3K1Q13233 1512 aa12.01□□□□□ -0.49
HMGXB3-204ENST00000513318 ATP1B4Q9UN42 357 aaPredicted RBP12□□□□□ -0.49
HMGXB3-204ENST00000513318 KIF14Q15058 1648 aa11.99□□□□□ -0.49
HMGXB3-204ENST00000513318 TSPOAP1O95153 1857 aa11.98□□□□□ -0.49
HMGXB3-204ENST00000513318 GLI2P10070 1586 aa11.98□□□□□ -0.49
HMGXB3-204ENST00000513318 EHBP1L1Q8N3D4 1523 aa11.98□□□□□ -0.49
HMGXB3-204ENST00000513318 ARID3CA6NKF2 412 aa11.98□□□□□ -0.49
HMGXB3-204ENST00000513318 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.98□□□□□ -0.49
HMGXB3-204ENST00000513318 HNRNPUL2Q1KMD3 747 aaKnown RBP11.98□□□□□ -0.49
HMGXB3-204ENST00000513318 ABCA9Q8IUA7 1624 aa11.97□□□□□ -0.49
HMGXB3-204ENST00000513318 ABCC10Q5T3U5 1492 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms