RNA–Protein interactions for RNA: ENST00000512868.6

SERF1A-208, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 4

Gene SERF1A, Length 532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-208ENST00000512868 JPH4Q96JJ6 628 aa24.38■■□□□ 1.49
SERF1A-208ENST00000512868 KIAA0586Q9BVV6 1533 aa24.38■■□□□ 1.49
SERF1A-208ENST00000512868 ARAP1Q96P48 1450 aa24.36■■□□□ 1.49
SERF1A-208ENST00000512868 CSRNP3Q8WYN3 585 aa24.34■■□□□ 1.49
SERF1A-208ENST00000512868 SHROOM2Q13796 1616 aa24.32■■□□□ 1.48
SERF1A-208ENST00000512868 PRG4Q92954 1404 aaPredicted RBP24.31■■□□□ 1.48
SERF1A-208ENST00000512868 PRXQ9BXM0 1461 aa24.3■■□□□ 1.48
SERF1A-208ENST00000512868 ERCC6L2Q5T890 1561 aa24.21■■□□□ 1.47
SERF1A-208ENST00000512868 FAM9AQ8IZU1 332 aaPredicted RBP24.21■■□□□ 1.47
SERF1A-208ENST00000512868 IQGAP2Q13576 1575 aa24.2■■□□□ 1.46
SERF1A-208ENST00000512868 CARMIL2Q6F5E8 1435 aa24.17■■□□□ 1.46
SERF1A-208ENST00000512868 UGGT2Q9NYU1 1516 aa24.09■■□□□ 1.45
SERF1A-208ENST00000512868 TNIKQ9UKE5 1360 aa24.06■■□□□ 1.44
SERF1A-208ENST00000512868 PTPRGP23470 1445 aa24.05■■□□□ 1.44
SERF1A-208ENST00000512868 CTTNBP2Q8WZ74 1663 aa24.02■■□□□ 1.44
SERF1A-208ENST00000512868 GOLGA3Q08378 1498 aa24.02■■□□□ 1.44
SERF1A-208ENST00000512868 DISP1Q96F81 1524 aa24.02■■□□□ 1.44
SERF1A-208ENST00000512868 KIF21BO75037 1637 aa24.02■■□□□ 1.44
SERF1A-208ENST00000512868 NPM1P06748 294 aaKnown RBP eCLIP23.98■■□□□ 1.43
SERF1A-208ENST00000512868 TTBK1Q5TCY1 1321 aaPredicted RBP23.96■■□□□ 1.43
SERF1A-208ENST00000512868 KIAA0556O60303 1618 aa23.94■■□□□ 1.42
SERF1A-208ENST00000512868 TRHP20396 242 aaPredicted RBP23.93■■□□□ 1.42
SERF1A-208ENST00000512868 UBTFP17480 764 aaKnown RBP23.92■■□□□ 1.42
SERF1A-208ENST00000512868 UACAQ9BZF9 1416 aa23.87■■□□□ 1.41
SERF1A-208ENST00000512868 EHMT2Q96KQ7 1210 aa23.85■■□□□ 1.41
SERF1A-208ENST00000512868 UHRF1BP1LA0JNW5 1464 aa23.84■■□□□ 1.41
SERF1A-208ENST00000512868 ADCY10Q96PN6 1610 aa23.84■■□□□ 1.41
SERF1A-208ENST00000512868 RANGAP1P46060 587 aaPredicted RBP23.82■■□□□ 1.4
SERF1A-208ENST00000512868 P3H3Q8IVL6 736 aa23.81■■□□□ 1.4
SERF1A-208ENST00000512868 ABCC2Q92887 1545 aa23.8■■□□□ 1.4
SERF1A-208ENST00000512868 SAMD9Q5K651 1589 aa23.78■■□□□ 1.4
SERF1A-208ENST00000512868 MAPKBP1O60336 1514 aa23.77■■□□□ 1.4
SERF1A-208ENST00000512868 EFCAB5A4FU69 1503 aa23.75■■□□□ 1.39
SERF1A-208ENST00000512868 PLB1Q6P1J6 1458 aa23.74■■□□□ 1.39
SERF1A-208ENST00000512868 KDM5BQ9UGL1 1544 aa23.71■■□□□ 1.39
SERF1A-208ENST00000512868 ABCA8O94911 1581 aa23.69■■□□□ 1.38
SERF1A-208ENST00000512868 FHOD3Q2V2M9 1422 aa23.67■■□□□ 1.38
SERF1A-208ENST00000512868 ABCC10Q5T3U5 1492 aa23.67■■□□□ 1.38
SERF1A-208ENST00000512868 FAM69CQ0P6D2 419 aa23.65■■□□□ 1.38
SERF1A-208ENST00000512868 ASXL2Q76L83 1435 aa23.64■■□□□ 1.37
SERF1A-208ENST00000512868 ARHGAP35Q9NRY4 1499 aa23.6■■□□□ 1.37
SERF1A-208ENST00000512868 FMN1Q68DA7 1419 aa23.59■■□□□ 1.37
SERF1A-208ENST00000512868 ZCCHC11Q5TAX3 1644 aaKnown RBP23.58■■□□□ 1.36
SERF1A-208ENST00000512868 KIF13AQ9H1H9 1805 aa23.57■■□□□ 1.36
SERF1A-208ENST00000512868 DIP2BQ9P265 1576 aa23.56■■□□□ 1.36
SERF1A-208ENST00000512868 RAPGEF6Q8TEU7 1601 aa23.55■■□□□ 1.36
SERF1A-208ENST00000512868 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.53■■□□□ 1.36
SERF1A-208ENST00000512868 HNRNPUL2Q1KMD3 747 aaKnown RBP23.53■■□□□ 1.36
SERF1A-208ENST00000512868 ATP10BO94823 1461 aa23.53■■□□□ 1.36
SERF1A-208ENST00000512868 WDR7Q9Y4E6 1490 aa23.53■■□□□ 1.36
SERF1A-208ENST00000512868 ARID3CA6NKF2 412 aa23.52■■□□□ 1.36
SERF1A-208ENST00000512868 CLIP1P30622 1438 aa23.51■■□□□ 1.35
SERF1A-208ENST00000512868 NUP153P49790 1475 aaKnown RBP23.5■■□□□ 1.35
SERF1A-208ENST00000512868 EPRSP07814 1512 aaKnown RBP23.49■■□□□ 1.35
SERF1A-208ENST00000512868 GLI2P10070 1586 aa23.48■■□□□ 1.35
SERF1A-208ENST00000512868 KCNH8Q96L42 1107 aa23.45■■□□□ 1.34
SERF1A-208ENST00000512868 ATP1B4Q9UN42 357 aaPredicted RBP23.45■■□□□ 1.34
SERF1A-208ENST00000512868 PLEKHD1A6NEE1 506 aa23.43■■□□□ 1.34
SERF1A-208ENST00000512868 LOC105371045A0A1W2PR82 267 aa23.42■■□□□ 1.34
SERF1A-208ENST00000512868 HECW1Q76N89 1606 aa23.39■■□□□ 1.33
SERF1A-208ENST00000512868 CEP162Q5TB80 1403 aa23.39■■□□□ 1.33
SERF1A-208ENST00000512868 CDK11AQ9UQ88 783 aaPredicted RBP23.38■■□□□ 1.33
SERF1A-208ENST00000512868 CASKIN1Q8WXD9 1431 aa23.36■■□□□ 1.33
SERF1A-208ENST00000512868 CD109Q6YHK3 1445 aa23.33■■□□□ 1.33
SERF1A-208ENST00000512868 TEX14Q8IWB6 1497 aa23.33■■□□□ 1.33
SERF1A-208ENST00000512868 MAP3K4Q9Y6R4 1608 aa23.32■■□□□ 1.32
SERF1A-208ENST00000512868 CDK13Q14004 1512 aaKnown RBP23.3■■□□□ 1.32
SERF1A-208ENST00000512868 FYCO1Q9BQS8 1478 aa23.3■■□□□ 1.32
SERF1A-208ENST00000512868 CCDC18Q5T9S5 1454 aa23.29■■□□□ 1.32
SERF1A-208ENST00000512868 MAGI3Q5TCQ9 1506 aa23.28■■□□□ 1.32
SERF1A-208ENST00000512868 CFAP43Q8NDM7 1665 aa23.26■■□□□ 1.31
SERF1A-208ENST00000512868 PCF11O94913 1555 aaKnown RBP23.26■■□□□ 1.31
SERF1A-208ENST00000512868 TSPOAP1O95153 1857 aa23.25■■□□□ 1.31
SERF1A-208ENST00000512868 ABCA9Q8IUA7 1624 aa23.23■■□□□ 1.31
SERF1A-208ENST00000512868 PPRC1Q5VV67 1664 aaKnown RBP23.2■■□□□ 1.3
SERF1A-208ENST00000512868 KDM6BO15054 1643 aa23.2■■□□□ 1.3
SERF1A-208ENST00000512868 TROQ12816 1431 aaPredicted RBP23.19■■□□□ 1.3
SERF1A-208ENST00000512868 PHLDB1Q86UU1 1377 aa23.19■■□□□ 1.3
SERF1A-208ENST00000512868 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.15■■□□□ 1.3
SERF1A-208ENST00000512868 NEO1Q92859 1461 aa23.12■■□□□ 1.29
SERF1A-208ENST00000512868 VPS8Q8N3P4 1428 aa23.12■■□□□ 1.29
SERF1A-208ENST00000512868 KIF14Q15058 1648 aa23.11■■□□□ 1.29
SERF1A-208ENST00000512868 PLCH2O75038 1416 aa23.08■■□□□ 1.29
SERF1A-208ENST00000512868 LRRIQ1Q96JM4 1722 aa23.08■■□□□ 1.29
SERF1A-208ENST00000512868 COL17A1Q9UMD9 1497 aaPredicted RBP23.08■■□□□ 1.29
SERF1A-208ENST00000512868 ARAP3Q8WWN8 1544 aa23.08■■□□□ 1.28
SERF1A-208ENST00000512868 TTC37Q6PGP7 1564 aa23.06■■□□□ 1.28
SERF1A-208ENST00000512868 FANCAO15360 1455 aa23.06■■□□□ 1.28
SERF1A-208ENST00000512868 MTUS2Q5JR59 1369 aa23.05■■□□□ 1.28
SERF1A-208ENST00000512868 EFCAB2Q5VUJ9 269 aa23.05■■□□□ 1.28
SERF1A-208ENST00000512868 AKNAQ7Z591 1439 aa23.02■■□□□ 1.28
SERF1A-208ENST00000512868 CFAP74Q9C0B2 1584 aa23.01■■□□□ 1.27
SERF1A-208ENST00000512868 APLP2Q06481 763 aa22.97■■□□□ 1.27
SERF1A-208ENST00000512868 RAPGEF3O95398 923 aa22.96■■□□□ 1.27
SERF1A-208ENST00000512868 DENND4BO75064 1496 aaPredicted RBP22.96■■□□□ 1.27
SERF1A-208ENST00000512868 EHBP1L1Q8N3D4 1523 aa22.96■■□□□ 1.27
SERF1A-208ENST00000512868 ARHGAP5Q13017 1502 aa22.95■■□□□ 1.26
SERF1A-208ENST00000512868 MYO5CQ9NQX4 1742 aa22.94■■□□□ 1.26
SERF1A-208ENST00000512868 AEBP2Q6ZN18 517 aaPredicted RBP22.94■■□□□ 1.26
SERF1A-208ENST00000512868 TIAM1Q13009 1591 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms