RNA–Protein interactions for RNA: ENST00000512670.1

PDE6A-203, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best)

Gene PDE6A, Length 2,189 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-203ENST00000512670 NUP160Q12769 1436 aa17.59■□□□□ 0.41
PDE6A-203ENST00000512670 OSCARQ8IYS5 282 aa17.56■□□□□ 0.4
PDE6A-203ENST00000512670 CTTNBP2Q8WZ74 1663 aa17.55■□□□□ 0.4
PDE6A-203ENST00000512670 CLASP1Q7Z460 1538 aa17.53■□□□□ 0.4
PDE6A-203ENST00000512670 IQGAP2Q13576 1575 aa17.5■□□□□ 0.39
PDE6A-203ENST00000512670 KIAA0586Q9BVV6 1533 aa17.5■□□□□ 0.39
PDE6A-203ENST00000512670 ERCC6L2Q5T890 1561 aa17.47■□□□□ 0.39
PDE6A-203ENST00000512670 P3H3Q8IVL6 736 aa17.46■□□□□ 0.39
PDE6A-203ENST00000512670 TNIKQ9UKE5 1360 aa17.45■□□□□ 0.38
PDE6A-203ENST00000512670 TTBK1Q5TCY1 1321 aaPredicted RBP17.45■□□□□ 0.38
PDE6A-203ENST00000512670 JPH4Q96JJ6 628 aa17.45■□□□□ 0.38
PDE6A-203ENST00000512670 SHROOM2Q13796 1616 aa17.41■□□□□ 0.38
PDE6A-203ENST00000512670 PRG4Q92954 1404 aaPredicted RBP17.41■□□□□ 0.38
PDE6A-203ENST00000512670 CEP162Q5TB80 1403 aa17.4■□□□□ 0.38
PDE6A-203ENST00000512670 DISP1Q96F81 1524 aa17.38■□□□□ 0.37
PDE6A-203ENST00000512670 UGGT2Q9NYU1 1516 aa17.37■□□□□ 0.37
PDE6A-203ENST00000512670 CLIP1P30622 1438 aa17.36■□□□□ 0.37
PDE6A-203ENST00000512670 FHOD3Q2V2M9 1422 aa17.36■□□□□ 0.37
PDE6A-203ENST00000512670 ARHGAP35Q9NRY4 1499 aa17.36■□□□□ 0.37
PDE6A-203ENST00000512670 KIAA0556O60303 1618 aa17.35■□□□□ 0.37
PDE6A-203ENST00000512670 SAMD9Q5K651 1589 aa17.34■□□□□ 0.37
PDE6A-203ENST00000512670 ARHGEF11O15085 1522 aa17.33■□□□□ 0.36
PDE6A-203ENST00000512670 ARAP1Q96P48 1450 aa17.31■□□□□ 0.36
PDE6A-203ENST00000512670 RIMBP3CA6NJZ7 1639 aa17.31■□□□□ 0.36
PDE6A-203ENST00000512670 RIMBP3BA6NNM3 1639 aa17.31■□□□□ 0.36
PDE6A-203ENST00000512670 RIMBP3Q9UFD9 1639 aa17.31■□□□□ 0.36
PDE6A-203ENST00000512670 CARMIL2Q6F5E8 1435 aa17.27■□□□□ 0.36
PDE6A-203ENST00000512670 EFCAB5A4FU69 1503 aa17.26■□□□□ 0.35
PDE6A-203ENST00000512670 DNAJC5Q9H3Z4 198 aa17.24■□□□□ 0.35
PDE6A-203ENST00000512670 ARID3CA6NKF2 412 aa17.23■□□□□ 0.35
PDE6A-203ENST00000512670 PTPRGP23470 1445 aa17.21■□□□□ 0.35
PDE6A-203ENST00000512670 CYB5RLQ6IPT4 315 aa17.21■□□□□ 0.35
PDE6A-203ENST00000512670 PLB1Q6P1J6 1458 aa17.21■□□□□ 0.35
PDE6A-203ENST00000512670 ATP1B4Q9UN42 357 aaPredicted RBP17.18■□□□□ 0.34
PDE6A-203ENST00000512670 PCF11O94913 1555 aaKnown RBP17.16■□□□□ 0.34
PDE6A-203ENST00000512670 VPS8Q8N3P4 1428 aa17.11■□□□□ 0.33
PDE6A-203ENST00000512670 ABCA8O94911 1581 aa17.11■□□□□ 0.33
PDE6A-203ENST00000512670 ADCY10Q96PN6 1610 aa17.11■□□□□ 0.33
PDE6A-203ENST00000512670 FMN1Q68DA7 1419 aa17.11■□□□□ 0.33
PDE6A-203ENST00000512670 RAPGEF6Q8TEU7 1601 aa17.11■□□□□ 0.33
PDE6A-203ENST00000512670 LRRIQ1Q96JM4 1722 aa17.1■□□□□ 0.33
PDE6A-203ENST00000512670 UACAQ9BZF9 1416 aa17.1■□□□□ 0.33
PDE6A-203ENST00000512670 NUP153P49790 1475 aaKnown RBP17.08■□□□□ 0.33
PDE6A-203ENST00000512670 CDK13Q14004 1512 aaKnown RBP17.08■□□□□ 0.32
PDE6A-203ENST00000512670 ABCC2Q92887 1545 aa17.06■□□□□ 0.32
PDE6A-203ENST00000512670 PPARGC1BQ86YN6 1023 aaKnown RBP17.05■□□□□ 0.32
PDE6A-203ENST00000512670 CASKIN1Q8WXD9 1431 aa17.05■□□□□ 0.32
PDE6A-203ENST00000512670 HECW1Q76N89 1606 aa17.03■□□□□ 0.32
PDE6A-203ENST00000512670 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.03■□□□□ 0.32
PDE6A-203ENST00000512670 HNRNPUL2Q1KMD3 747 aaKnown RBP17.03■□□□□ 0.32
PDE6A-203ENST00000512670 FYCO1Q9BQS8 1478 aa17.03■□□□□ 0.32
PDE6A-203ENST00000512670 ATP10BO94823 1461 aa17.01■□□□□ 0.31
PDE6A-203ENST00000512670 ZCCHC11Q5TAX3 1644 aaKnown RBP17■□□□□ 0.31
PDE6A-203ENST00000512670 EPRSP07814 1512 aaKnown RBP17■□□□□ 0.31
PDE6A-203ENST00000512670 UHRF1BP1LA0JNW5 1464 aa16.99■□□□□ 0.31
PDE6A-203ENST00000512670 KANK4Q5T7N3 995 aaPredicted RBP16.96■□□□□ 0.31
PDE6A-203ENST00000512670 MAGI3Q5TCQ9 1506 aa16.96■□□□□ 0.31
PDE6A-203ENST00000512670 KDM5BQ9UGL1 1544 aa16.96■□□□□ 0.31
PDE6A-203ENST00000512670 TIAM1Q13009 1591 aa16.93■□□□□ 0.3
PDE6A-203ENST00000512670 CFAP43Q8NDM7 1665 aa16.93■□□□□ 0.3
PDE6A-203ENST00000512670 NPM1P06748 294 aaKnown RBP eCLIP16.91■□□□□ 0.3
PDE6A-203ENST00000512670 CCDC18Q5T9S5 1454 aa16.9■□□□□ 0.3
PDE6A-203ENST00000512670 KCNH8Q96L42 1107 aa16.89■□□□□ 0.3
PDE6A-203ENST00000512670 ASXL2Q76L83 1435 aa16.89■□□□□ 0.3
PDE6A-203ENST00000512670 APLP2Q06481 763 aa16.89■□□□□ 0.29
PDE6A-203ENST00000512670 KIF14Q15058 1648 aa16.86■□□□□ 0.29
PDE6A-203ENST00000512670 LRRC9Q6ZRR7 1453 aa16.85■□□□□ 0.29
PDE6A-203ENST00000512670 PLEKHD1A6NEE1 506 aa16.85■□□□□ 0.29
PDE6A-203ENST00000512670 MTUS2Q5JR59 1369 aa16.85■□□□□ 0.29
PDE6A-203ENST00000512670 WDR7Q9Y4E6 1490 aa16.84■□□□□ 0.29
PDE6A-203ENST00000512670 MAPKBP1O60336 1514 aa16.82■□□□□ 0.28
PDE6A-203ENST00000512670 TROQ12816 1431 aaPredicted RBP16.82■□□□□ 0.28
PDE6A-203ENST00000512670 MAP3K1Q13233 1512 aa16.8■□□□□ 0.28
PDE6A-203ENST00000512670 EHBP1L1Q8N3D4 1523 aa16.8■□□□□ 0.28
PDE6A-203ENST00000512670 CDK11AQ9UQ88 783 aaPredicted RBP16.79■□□□□ 0.28
PDE6A-203ENST00000512670 TTC37Q6PGP7 1564 aa16.78■□□□□ 0.28
PDE6A-203ENST00000512670 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.76■□□□□ 0.27
PDE6A-203ENST00000512670 DIP2BQ9P265 1576 aa16.76■□□□□ 0.27
PDE6A-203ENST00000512670 NCOA2Q15596 1464 aa16.75■□□□□ 0.27
PDE6A-203ENST00000512670 FAM69CQ0P6D2 419 aa16.75■□□□□ 0.27
PDE6A-203ENST00000512670 TRHP20396 242 aaPredicted RBP16.74■□□□□ 0.27
PDE6A-203ENST00000512670 KIF13AQ9H1H9 1805 aa16.73■□□□□ 0.27
PDE6A-203ENST00000512670 SUPT6HQ7KZ85 1726 aaKnown RBP16.73■□□□□ 0.27
PDE6A-203ENST00000512670 PHLDB1Q86UU1 1377 aa16.73■□□□□ 0.27
PDE6A-203ENST00000512670 ABCC10Q5T3U5 1492 aa16.73■□□□□ 0.27
PDE6A-203ENST00000512670 TSPOAP1O95153 1857 aa16.7■□□□□ 0.26
PDE6A-203ENST00000512670 ABCA9Q8IUA7 1624 aa16.68■□□□□ 0.26
PDE6A-203ENST00000512670 CDC42BPAQ5VT25 1732 aa16.68■□□□□ 0.26
PDE6A-203ENST00000512670 CCNB3Q8WWL7 1395 aa16.67■□□□□ 0.26
PDE6A-203ENST00000512670 GPATCH8Q9UKJ3 1502 aaKnown RBP16.66■□□□□ 0.26
PDE6A-203ENST00000512670 ZNF777Q9ULD5 760 aaPredicted RBP16.65■□□□□ 0.26
PDE6A-203ENST00000512670 CD109Q6YHK3 1445 aa16.65■□□□□ 0.26
PDE6A-203ENST00000512670 CDC42BPBQ9Y5S2 1711 aa16.65■□□□□ 0.26
PDE6A-203ENST00000512670 MAP3K4Q9Y6R4 1608 aa16.65■□□□□ 0.26
PDE6A-203ENST00000512670 ZNF644Q9H582 1327 aaPredicted RBP16.65■□□□□ 0.26
PDE6A-203ENST00000512670 MYO5CQ9NQX4 1742 aa16.64■□□□□ 0.25
PDE6A-203ENST00000512670 GLI2P10070 1586 aa16.64■□□□□ 0.25
PDE6A-203ENST00000512670 PREX2Q70Z35 1606 aa16.63■□□□□ 0.25
PDE6A-203ENST00000512670 ARHGAP5Q13017 1502 aa16.62■□□□□ 0.25
PDE6A-203ENST00000512670 PPRC1Q5VV67 1664 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms