RNA–Protein interactions for RNA: ENST00000512526.1

SGCA-208, Transcript of sarcoglycan alpha, humanhuman

TSL 3

Gene SGCA, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-208ENST00000512526 ARHGEF11O15085 1522 aa26.16■■□□□ 1.78
SGCA-208ENST00000512526 RIMBP3CA6NJZ7 1639 aa26.09■■□□□ 1.77
SGCA-208ENST00000512526 RIMBP3BA6NNM3 1639 aa26.09■■□□□ 1.77
SGCA-208ENST00000512526 RIMBP3Q9UFD9 1639 aa26.09■■□□□ 1.77
SGCA-208ENST00000512526 SHROOM2Q13796 1616 aa26.06■■□□□ 1.76
SGCA-208ENST00000512526 PRG4Q92954 1404 aaPredicted RBP26.05■■□□□ 1.76
SGCA-208ENST00000512526 CYB5RLQ6IPT4 315 aa26.03■■□□□ 1.76
SGCA-208ENST00000512526 ARAP1Q96P48 1450 aa26■■□□□ 1.75
SGCA-208ENST00000512526 ERCC6L2Q5T890 1561 aa25.99■■□□□ 1.75
SGCA-208ENST00000512526 IQGAP2Q13576 1575 aa25.97■■□□□ 1.75
SGCA-208ENST00000512526 KIF21BO75037 1637 aa25.96■■□□□ 1.75
SGCA-208ENST00000512526 UGGT2Q9NYU1 1516 aa25.9■■□□□ 1.74
SGCA-208ENST00000512526 EHMT2Q96KQ7 1210 aa25.9■■□□□ 1.74
SGCA-208ENST00000512526 GOLGA3Q08378 1498 aa25.88■■□□□ 1.73
SGCA-208ENST00000512526 UBTFP17480 764 aaKnown RBP25.88■■□□□ 1.73
SGCA-208ENST00000512526 CARMIL2Q6F5E8 1435 aa25.88■■□□□ 1.73
SGCA-208ENST00000512526 DISP1Q96F81 1524 aa25.86■■□□□ 1.73
SGCA-208ENST00000512526 TNIKQ9UKE5 1360 aa25.82■■□□□ 1.72
SGCA-208ENST00000512526 CTTNBP2Q8WZ74 1663 aa25.8■■□□□ 1.72
SGCA-208ENST00000512526 PTPRGP23470 1445 aa25.8■■□□□ 1.72
SGCA-208ENST00000512526 RANGAP1P46060 587 aaPredicted RBP25.72■■□□□ 1.71
SGCA-208ENST00000512526 KIAA0556O60303 1618 aa25.71■■□□□ 1.71
SGCA-208ENST00000512526 TTBK1Q5TCY1 1321 aaPredicted RBP25.71■■□□□ 1.71
SGCA-208ENST00000512526 P3H3Q8IVL6 736 aa25.71■■□□□ 1.71
SGCA-208ENST00000512526 LOC105371045A0A1W2PR82 267 aa25.65■■□□□ 1.7
SGCA-208ENST00000512526 SAMD9Q5K651 1589 aa25.62■■□□□ 1.69
SGCA-208ENST00000512526 UACAQ9BZF9 1416 aa25.6■■□□□ 1.69
SGCA-208ENST00000512526 UHRF1BP1LA0JNW5 1464 aa25.56■■□□□ 1.68
SGCA-208ENST00000512526 EFCAB5A4FU69 1503 aa25.56■■□□□ 1.68
SGCA-208ENST00000512526 FHOD3Q2V2M9 1422 aa25.55■■□□□ 1.68
SGCA-208ENST00000512526 NPM1P06748 294 aaKnown RBP eCLIP25.55■■□□□ 1.68
SGCA-208ENST00000512526 ARHGAP35Q9NRY4 1499 aa25.54■■□□□ 1.68
SGCA-208ENST00000512526 ADCY10Q96PN6 1610 aa25.53■■□□□ 1.68
SGCA-208ENST00000512526 PLB1Q6P1J6 1458 aa25.53■■□□□ 1.68
SGCA-208ENST00000512526 ABCC2Q92887 1545 aa25.48■■□□□ 1.67
SGCA-208ENST00000512526 ABCA8O94911 1581 aa25.48■■□□□ 1.67
SGCA-208ENST00000512526 CLIP1P30622 1438 aa25.46■■□□□ 1.67
SGCA-208ENST00000512526 KDM5BQ9UGL1 1544 aa25.43■■□□□ 1.66
SGCA-208ENST00000512526 CEP162Q5TB80 1403 aa25.38■■□□□ 1.65
SGCA-208ENST00000512526 FMN1Q68DA7 1419 aa25.38■■□□□ 1.65
SGCA-208ENST00000512526 TRHP20396 242 aaPredicted RBP25.38■■□□□ 1.65
SGCA-208ENST00000512526 MAPKBP1O60336 1514 aa25.36■■□□□ 1.65
SGCA-208ENST00000512526 ATP10BO94823 1461 aa25.34■■□□□ 1.65
SGCA-208ENST00000512526 ASXL2Q76L83 1435 aa25.32■■□□□ 1.64
SGCA-208ENST00000512526 ARID3CA6NKF2 412 aa25.32■■□□□ 1.64
SGCA-208ENST00000512526 NUP153P49790 1475 aaKnown RBP25.32■■□□□ 1.64
SGCA-208ENST00000512526 RAPGEF6Q8TEU7 1601 aa25.3■■□□□ 1.64
SGCA-208ENST00000512526 ABCC10Q5T3U5 1492 aa25.27■■□□□ 1.64
SGCA-208ENST00000512526 ZCCHC11Q5TAX3 1644 aaKnown RBP25.26■■□□□ 1.63
SGCA-208ENST00000512526 FAM69CQ0P6D2 419 aa25.25■■□□□ 1.63
SGCA-208ENST00000512526 ATP1B4Q9UN42 357 aaPredicted RBP25.25■■□□□ 1.63
SGCA-208ENST00000512526 CASKIN1Q8WXD9 1431 aa25.22■■□□□ 1.63
SGCA-208ENST00000512526 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.22■■□□□ 1.63
SGCA-208ENST00000512526 HNRNPUL2Q1KMD3 747 aaKnown RBP25.22■■□□□ 1.63
SGCA-208ENST00000512526 WDR7Q9Y4E6 1490 aa25.2■■□□□ 1.62
SGCA-208ENST00000512526 PLEKHD1A6NEE1 506 aa25.17■■□□□ 1.62
SGCA-208ENST00000512526 KCNH8Q96L42 1107 aa25.16■■□□□ 1.62
SGCA-208ENST00000512526 EPRSP07814 1512 aaKnown RBP25.16■■□□□ 1.62
SGCA-208ENST00000512526 DIP2BQ9P265 1576 aa25.14■■□□□ 1.61
SGCA-208ENST00000512526 CDK13Q14004 1512 aaKnown RBP25.12■■□□□ 1.61
SGCA-208ENST00000512526 HECW1Q76N89 1606 aa25.12■■□□□ 1.61
SGCA-208ENST00000512526 FYCO1Q9BQS8 1478 aa25.12■■□□□ 1.61
SGCA-208ENST00000512526 PCF11O94913 1555 aaKnown RBP25.1■■□□□ 1.61
SGCA-208ENST00000512526 GLI2P10070 1586 aa25.1■■□□□ 1.61
SGCA-208ENST00000512526 CDK11AQ9UQ88 783 aaPredicted RBP25.09■■□□□ 1.61
SGCA-208ENST00000512526 VPS8Q8N3P4 1428 aa25.07■■□□□ 1.6
SGCA-208ENST00000512526 KIF13AQ9H1H9 1805 aa25.05■■□□□ 1.6
SGCA-208ENST00000512526 CCDC18Q5T9S5 1454 aa25.03■■□□□ 1.6
SGCA-208ENST00000512526 TROQ12816 1431 aaPredicted RBP24.98■■□□□ 1.59
SGCA-208ENST00000512526 CD109Q6YHK3 1445 aa24.98■■□□□ 1.59
SGCA-208ENST00000512526 LRRIQ1Q96JM4 1722 aa24.96■■□□□ 1.59
SGCA-208ENST00000512526 AEBP2Q6ZN18 517 aaPredicted RBP24.95■■□□□ 1.58
SGCA-208ENST00000512526 MAP3K4Q9Y6R4 1608 aa24.93■■□□□ 1.58
SGCA-208ENST00000512526 MAGI3Q5TCQ9 1506 aa24.91■■□□□ 1.58
SGCA-208ENST00000512526 ABCA9Q8IUA7 1624 aa24.9■■□□□ 1.58
SGCA-208ENST00000512526 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.88■■□□□ 1.57
SGCA-208ENST00000512526 CFAP43Q8NDM7 1665 aa24.85■■□□□ 1.57
SGCA-208ENST00000512526 MTUS2Q5JR59 1369 aa24.85■■□□□ 1.57
SGCA-208ENST00000512526 TEX14Q8IWB6 1497 aa24.84■■□□□ 1.57
SGCA-208ENST00000512526 PPRC1Q5VV67 1664 aaKnown RBP24.84■■□□□ 1.57
SGCA-208ENST00000512526 MAP3K1Q13233 1512 aa24.83■■□□□ 1.57
SGCA-208ENST00000512526 PLCH2O75038 1416 aa24.81■■□□□ 1.56
SGCA-208ENST00000512526 KANK4Q5T7N3 995 aaPredicted RBP24.81■■□□□ 1.56
SGCA-208ENST00000512526 KIF14Q15058 1648 aa24.8■■□□□ 1.56
SGCA-208ENST00000512526 TSPOAP1O95153 1857 aa24.8■■□□□ 1.56
SGCA-208ENST00000512526 TIAM1Q13009 1591 aa24.79■■□□□ 1.56
SGCA-208ENST00000512526 TTC37Q6PGP7 1564 aa24.79■■□□□ 1.56
SGCA-208ENST00000512526 APLP2Q06481 763 aa24.78■■□□□ 1.56
SGCA-208ENST00000512526 PHLDB1Q86UU1 1377 aa24.78■■□□□ 1.56
SGCA-208ENST00000512526 COL17A1Q9UMD9 1497 aaPredicted RBP24.77■■□□□ 1.56
SGCA-208ENST00000512526 LRRC9Q6ZRR7 1453 aa24.76■■□□□ 1.55
SGCA-208ENST00000512526 EFCAB2Q5VUJ9 269 aa24.74■■□□□ 1.55
SGCA-208ENST00000512526 NEO1Q92859 1461 aa24.74■■□□□ 1.55
SGCA-208ENST00000512526 EHBP1L1Q8N3D4 1523 aa24.73■■□□□ 1.55
SGCA-208ENST00000512526 FANCAO15360 1455 aa24.71■■□□□ 1.55
SGCA-208ENST00000512526 ARAP3Q8WWN8 1544 aa24.7■■□□□ 1.54
SGCA-208ENST00000512526 GPATCH8Q9UKJ3 1502 aaKnown RBP24.7■■□□□ 1.54
SGCA-208ENST00000512526 AKNAQ7Z591 1439 aa24.69■■□□□ 1.54
SGCA-208ENST00000512526 CCNB3Q8WWL7 1395 aa24.67■■□□□ 1.54
SGCA-208ENST00000512526 NCOA2Q15596 1464 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms