RNA–Protein interactions for RNA: ENST00000512394.5

SNX2-211, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-211ENST00000512394 PRG4Q92954 1404 aaPredicted RBP29.41■■■□□ 2.3
SNX2-211ENST00000512394 JPH4Q96JJ6 628 aa29.37■■■□□ 2.29
SNX2-211ENST00000512394 KIAA0586Q9BVV6 1533 aa29.32■■■□□ 2.28
SNX2-211ENST00000512394 CARMIL1Q5VZK9 1371 aa29.28■■■□□ 2.28
SNX2-211ENST00000512394 IQGAP2Q13576 1575 aa29.13■■■□□ 2.25
SNX2-211ENST00000512394 RAPGEF2Q9Y4G8 1499 aa29.09■■■□□ 2.25
SNX2-211ENST00000512394 ADCY10Q96PN6 1610 aa29.09■■■□□ 2.25
SNX2-211ENST00000512394 KIF13AQ9H1H9 1805 aa29.05■■■□□ 2.24
SNX2-211ENST00000512394 CARMIL2Q6F5E8 1435 aa29.04■■■□□ 2.24
SNX2-211ENST00000512394 NPM1P06748 294 aaKnown RBP eCLIP29.02■■■□□ 2.24
SNX2-211ENST00000512394 MAPKBP1O60336 1514 aa29.02■■■□□ 2.24
SNX2-211ENST00000512394 PTPRGP23470 1445 aa28.98■■■□□ 2.23
SNX2-211ENST00000512394 TNIKQ9UKE5 1360 aa28.97■■■□□ 2.23
SNX2-211ENST00000512394 CTTNBP2Q8WZ74 1663 aa28.93■■■□□ 2.22
SNX2-211ENST00000512394 UGGT2Q9NYU1 1516 aa28.93■■■□□ 2.22
SNX2-211ENST00000512394 DISP1Q96F81 1524 aa28.92■■■□□ 2.22
SNX2-211ENST00000512394 ABCC10Q5T3U5 1492 aa28.91■■■□□ 2.22
SNX2-211ENST00000512394 DIP2BQ9P265 1576 aa28.9■■■□□ 2.22
SNX2-211ENST00000512394 TTBK1Q5TCY1 1321 aaPredicted RBP28.88■■■□□ 2.21
SNX2-211ENST00000512394 KIAA0556O60303 1618 aa28.86■■■□□ 2.21
SNX2-211ENST00000512394 PRXQ9BXM0 1461 aa28.85■■■□□ 2.21
SNX2-211ENST00000512394 ABCC2Q92887 1545 aa28.84■■■□□ 2.21
SNX2-211ENST00000512394 FAM69CQ0P6D2 419 aa28.83■■■□□ 2.21
SNX2-211ENST00000512394 UHRF1BP1LA0JNW5 1464 aa28.81■■■□□ 2.2
SNX2-211ENST00000512394 UACAQ9BZF9 1416 aa28.78■■■□□ 2.2
SNX2-211ENST00000512394 GOLGA3Q08378 1498 aa28.73■■■□□ 2.19
SNX2-211ENST00000512394 PLB1Q6P1J6 1458 aa28.69■■■□□ 2.18
SNX2-211ENST00000512394 ASXL2Q76L83 1435 aa28.69■■■□□ 2.18
SNX2-211ENST00000512394 TSPOAP1O95153 1857 aa28.68■■■□□ 2.18
SNX2-211ENST00000512394 KDM5BQ9UGL1 1544 aa28.67■■■□□ 2.18
SNX2-211ENST00000512394 ZCCHC11Q5TAX3 1644 aaKnown RBP28.65■■■□□ 2.18
SNX2-211ENST00000512394 EEA1Q15075 1411 aa28.65■■■□□ 2.18
SNX2-211ENST00000512394 CSRNP3Q8WYN3 585 aa28.64■■■□□ 2.18
SNX2-211ENST00000512394 GLI2P10070 1586 aa28.62■■■□□ 2.17
SNX2-211ENST00000512394 KDM6BO15054 1643 aa28.58■■■□□ 2.17
SNX2-211ENST00000512394 ABCA8O94911 1581 aa28.55■■■□□ 2.16
SNX2-211ENST00000512394 EPRSP07814 1512 aaKnown RBP28.53■■■□□ 2.16
SNX2-211ENST00000512394 PPRC1Q5VV67 1664 aaKnown RBP28.51■■■□□ 2.16
SNX2-211ENST00000512394 MAP3K4Q9Y6R4 1608 aa28.49■■■□□ 2.15
SNX2-211ENST00000512394 SAMD9Q5K651 1589 aa28.49■■■□□ 2.15
SNX2-211ENST00000512394 WDR7Q9Y4E6 1490 aa28.47■■■□□ 2.15
SNX2-211ENST00000512394 AEBP2Q6ZN18 517 aaPredicted RBP28.47■■■□□ 2.15
SNX2-211ENST00000512394 FAM9AQ8IZU1 332 aaPredicted RBP28.44■■■□□ 2.14
SNX2-211ENST00000512394 KIF21BO75037 1637 aa28.43■■■□□ 2.14
SNX2-211ENST00000512394 CHIC1Q5VXU3 224 aa28.43■■■□□ 2.14
SNX2-211ENST00000512394 P3H3Q8IVL6 736 aa28.39■■■□□ 2.14
SNX2-211ENST00000512394 TEX14Q8IWB6 1497 aa28.39■■■□□ 2.13
SNX2-211ENST00000512394 CFAP43Q8NDM7 1665 aa28.34■■■□□ 2.13
SNX2-211ENST00000512394 RAPGEF6Q8TEU7 1601 aa28.33■■■□□ 2.13
SNX2-211ENST00000512394 EFCAB5A4FU69 1503 aa28.28■■■□□ 2.12
SNX2-211ENST00000512394 ATP10BO94823 1461 aa28.27■■■□□ 2.12
SNX2-211ENST00000512394 RANGAP1P46060 587 aaPredicted RBP28.25■■■□□ 2.11
SNX2-211ENST00000512394 KCNH8Q96L42 1107 aa28.24■■■□□ 2.11
SNX2-211ENST00000512394 FHOD3Q2V2M9 1422 aa28.24■■■□□ 2.11
SNX2-211ENST00000512394 CD109Q6YHK3 1445 aa28.24■■■□□ 2.11
SNX2-211ENST00000512394 MAGI3Q5TCQ9 1506 aa28.23■■■□□ 2.11
SNX2-211ENST00000512394 ARID3CA6NKF2 412 aa28.23■■■□□ 2.11
SNX2-211ENST00000512394 COL17A1Q9UMD9 1497 aaPredicted RBP28.21■■■□□ 2.11
SNX2-211ENST00000512394 NUP153P49790 1475 aaKnown RBP28.18■■■□□ 2.1
SNX2-211ENST00000512394 ABCA9Q8IUA7 1624 aa28.15■■■□□ 2.1
SNX2-211ENST00000512394 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.11■■■□□ 2.09
SNX2-211ENST00000512394 HNRNPUL2Q1KMD3 747 aaKnown RBP28.11■■■□□ 2.09
SNX2-211ENST00000512394 UBTFP17480 764 aaKnown RBP28.1■■■□□ 2.09
SNX2-211ENST00000512394 EHMT2Q96KQ7 1210 aa28.07■■■□□ 2.08
SNX2-211ENST00000512394 KDM4FA0A1W2PPD8 638 aa28.06■■■□□ 2.08
SNX2-211ENST00000512394 ARAP3Q8WWN8 1544 aa28.01■■■□□ 2.07
SNX2-211ENST00000512394 ADGRL1O94910 1474 aa27.99■■■□□ 2.07
SNX2-211ENST00000512394 ARHGAP35Q9NRY4 1499 aa27.98■■■□□ 2.07
SNX2-211ENST00000512394 FMN1Q68DA7 1419 aa27.98■■■□□ 2.07
SNX2-211ENST00000512394 PHLDB1Q86UU1 1377 aa27.98■■■□□ 2.07
SNX2-211ENST00000512394 PLEKHD1A6NEE1 506 aa27.97■■■□□ 2.07
SNX2-211ENST00000512394 HECW1Q76N89 1606 aa27.96■■■□□ 2.07
SNX2-211ENST00000512394 NEO1Q92859 1461 aa27.95■■■□□ 2.07
SNX2-211ENST00000512394 CDK13Q14004 1512 aaKnown RBP27.93■■■□□ 2.06
SNX2-211ENST00000512394 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.89■■■□□ 2.06
SNX2-211ENST00000512394 CFAP74Q9C0B2 1584 aa27.88■■■□□ 2.05
SNX2-211ENST00000512394 TTC37Q6PGP7 1564 aa27.86■■■□□ 2.05
SNX2-211ENST00000512394 ATP1B4Q9UN42 357 aaPredicted RBP27.82■■■□□ 2.04
SNX2-211ENST00000512394 FRMPD1Q5SYB0 1578 aa27.82■■■□□ 2.04
SNX2-211ENST00000512394 FANCAO15360 1455 aa27.8■■■□□ 2.04
SNX2-211ENST00000512394 RAPGEF3O95398 923 aa27.77■■■□□ 2.04
SNX2-211ENST00000512394 LRRIQ1Q96JM4 1722 aa27.77■■■□□ 2.04
SNX2-211ENST00000512394 AKNAQ7Z591 1439 aa27.75■■■□□ 2.03
SNX2-211ENST00000512394 RICTORQ6R327 1708 aa27.75■■■□□ 2.03
SNX2-211ENST00000512394 CDK11AQ9UQ88 783 aaPredicted RBP27.75■■■□□ 2.03
SNX2-211ENST00000512394 MYO5CQ9NQX4 1742 aa27.73■■■□□ 2.03
SNX2-211ENST00000512394 DENND4BO75064 1496 aaPredicted RBP27.73■■■□□ 2.03
SNX2-211ENST00000512394 KIF14Q15058 1648 aa27.73■■■□□ 2.03
SNX2-211ENST00000512394 PCF11O94913 1555 aaKnown RBP27.73■■■□□ 2.03
SNX2-211ENST00000512394 PLCH2O75038 1416 aa27.69■■■□□ 2.02
SNX2-211ENST00000512394 CLIP1P30622 1438 aa27.68■■■□□ 2.02
SNX2-211ENST00000512394 TROQ12816 1431 aaPredicted RBP27.68■■■□□ 2.02
SNX2-211ENST00000512394 CASKIN1Q8WXD9 1431 aa27.68■■■□□ 2.02
SNX2-211ENST00000512394 ARHGEF40Q8TER5 1519 aa27.68■■■□□ 2.02
SNX2-211ENST00000512394 CCDC18Q5T9S5 1454 aa27.68■■■□□ 2.02
SNX2-211ENST00000512394 ZMYM4Q5VZL5 1548 aa27.65■■■□□ 2.02
SNX2-211ENST00000512394 FYCO1Q9BQS8 1478 aa27.63■■■□□ 2.01
SNX2-211ENST00000512394 ADAMTSL3P82987 1691 aa27.6■■■□□ 2.01
SNX2-211ENST00000512394 BCORL1Q5H9F3 1711 aa27.59■■■□□ 2.01
SNX2-211ENST00000512394 ZFYVE16Q7Z3T8 1539 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms