RNA–Protein interactions for RNA: ENST00000512028.5

SPDL1-211, Transcript of spindle apparatus coiled-coil protein 1, humanhuman

TSL 4

Gene SPDL1, Length 667 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1-211ENST00000512028 HMGXB3Q12766 1538 aa16.39■□□□□ 0.21
SPDL1-211ENST00000512028 C19orf67A6NJJ6 358 aa16.38■□□□□ 0.21
SPDL1-211ENST00000512028 SMARCA2P51531 1590 aa16.36■□□□□ 0.21
SPDL1-211ENST00000512028 EVX2Q03828 476 aa16.35■□□□□ 0.21
SPDL1-211ENST00000512028 FARP1Q9Y4F1 1045 aaPredicted RBP16.34■□□□□ 0.21
SPDL1-211ENST00000512028 KIF21AQ7Z4S6 1674 aa16.32■□□□□ 0.2
SPDL1-211ENST00000512028 CREBZFQ9NS37 354 aa16.31■□□□□ 0.2
SPDL1-211ENST00000512028 LAMC3Q9Y6N6 1575 aa16.3■□□□□ 0.2
SPDL1-211ENST00000512028 SMARCA4P51532 1647 aa16.29■□□□□ 0.2
SPDL1-211ENST00000512028 BAZ1BQ9UIG0 1483 aaKnown RBP16.25■□□□□ 0.19
SPDL1-211ENST00000512028 PDS5BQ9NTI5 1447 aa16.21■□□□□ 0.19
SPDL1-211ENST00000512028 CD44P16070 742 aaKnown RBP16.17■□□□□ 0.18
SPDL1-211ENST00000512028 FKBP8Q14318 412 aa16.17■□□□□ 0.18
SPDL1-211ENST00000512028 BAZ1AQ9NRL2 1556 aaPredicted RBP16.17■□□□□ 0.18
SPDL1-211ENST00000512028 PEG3Q9GZU2 1588 aa16.12■□□□□ 0.17
SPDL1-211ENST00000512028 MRC2Q9UBG0 1479 aa16.11■□□□□ 0.17
SPDL1-211ENST00000512028 WDR62O43379 1518 aa16.09■□□□□ 0.17
SPDL1-211ENST00000512028 NPM1P06748 294 aaKnown RBP eCLIP16.08■□□□□ 0.16
SPDL1-211ENST00000512028 MNX1P50219 401 aaPredicted RBP16.07■□□□□ 0.16
SPDL1-211ENST00000512028 GABBR2O75899 941 aa16.05■□□□□ 0.16
SPDL1-211ENST00000512028 CADPSQ9ULU8 1353 aa16.04■□□□□ 0.16
SPDL1-211ENST00000512028 CLCN6P51797 869 aa16.01■□□□□ 0.15
SPDL1-211ENST00000512028 ZRANB1Q9UGI0 708 aa15.98■□□□□ 0.15
SPDL1-211ENST00000512028 RIMBP3CA6NJZ7 1639 aa15.97■□□□□ 0.15
SPDL1-211ENST00000512028 RIMBP3BA6NNM3 1639 aa15.97■□□□□ 0.15
SPDL1-211ENST00000512028 RIMBP3Q9UFD9 1639 aa15.97■□□□□ 0.15
SPDL1-211ENST00000512028 PLEKHG5O94827 1062 aa15.97■□□□□ 0.15
SPDL1-211ENST00000512028 MROH2BQ7Z745 1585 aa15.96■□□□□ 0.14
SPDL1-211ENST00000512028 PAK3O75914 559 aaPredicted RBP15.95■□□□□ 0.14
SPDL1-211ENST00000512028 MIER1Q8N108 512 aa15.95■□□□□ 0.14
SPDL1-211ENST00000512028 ZNF579Q8NAF0 562 aaKnown RBP15.95■□□□□ 0.14
SPDL1-211ENST00000512028 CEP164Q9UPV0 1460 aa15.93■□□□□ 0.14
SPDL1-211ENST00000512028 FANCD2Q9BXW9 1451 aa15.86■□□□□ 0.13
SPDL1-211ENST00000512028 PLCD3Q8N3E9 789 aa15.86■□□□□ 0.13
SPDL1-211ENST00000512028 ARHGEF11O15085 1522 aa15.85■□□□□ 0.13
SPDL1-211ENST00000512028 FBXO3Q9UK99 471 aa15.84■□□□□ 0.13
SPDL1-211ENST00000512028 CYB5RLQ6IPT4 315 aa15.79■□□□□ 0.12
SPDL1-211ENST00000512028 ZBTB47Q9UFB7 747 aaPredicted RBP15.79■□□□□ 0.12
SPDL1-211ENST00000512028 URB2Q14146 1524 aaKnown RBP15.78■□□□□ 0.12
SPDL1-211ENST00000512028 WIZO95785 1651 aa15.76■□□□□ 0.11
SPDL1-211ENST00000512028 PHF12Q96QT6 1004 aa15.74■□□□□ 0.11
SPDL1-211ENST00000512028 CFTRP13569 1480 aa15.73■□□□□ 0.11
SPDL1-211ENST00000512028 TSPYL2Q9H2G4 693 aaPredicted RBP15.72■□□□□ 0.11
SPDL1-211ENST00000512028 GALR2O43603 387 aaPredicted RBP15.69■□□□□ 0.1
SPDL1-211ENST00000512028 POTEIP0CG38 1075 aa15.69■□□□□ 0.1
SPDL1-211ENST00000512028 DCBLD2Q96PD2 775 aa15.69■□□□□ 0.1
SPDL1-211ENST00000512028 ZNF608Q9ULD9 1512 aaPredicted RBP15.68■□□□□ 0.1
SPDL1-211ENST00000512028 CCDC61Q9Y6R9 512 aa15.67■□□□□ 0.1
SPDL1-211ENST00000512028 RASEFQ8IZ41 740 aa15.66■□□□□ 0.1
SPDL1-211ENST00000512028 ARAP1Q96P48 1450 aa15.65■□□□□ 0.1
SPDL1-211ENST00000512028 IFT140Q96RY7 1462 aa15.63■□□□□ 0.09
SPDL1-211ENST00000512028 CHD1O14646 1710 aa15.6■□□□□ 0.09
SPDL1-211ENST00000512028 NUBP1P53384 320 aa15.6■□□□□ 0.09
SPDL1-211ENST00000512028 PRDM2Q13029 1718 aa15.58■□□□□ 0.08
SPDL1-211ENST00000512028 VASPP50552 380 aaPredicted RBP15.58■□□□□ 0.08
SPDL1-211ENST00000512028 EIF4G3O43432 1585 aaKnown RBP15.57■□□□□ 0.08
SPDL1-211ENST00000512028 MS4A3Q96HJ5 214 aa15.56■□□□□ 0.08
SPDL1-211ENST00000512028 KIF12Q96FN5 646 aa15.55■□□□□ 0.08
SPDL1-211ENST00000512028 RSF1Q96T23 1441 aaPredicted RBP15.53■□□□□ 0.08
SPDL1-211ENST00000512028 FAM212AQ96EL1 285 aa15.51■□□□□ 0.07
SPDL1-211ENST00000512028 TOPBP1Q92547 1522 aa15.5■□□□□ 0.07
SPDL1-211ENST00000512028 TOP2AP11388 1531 aaKnown RBP15.48■□□□□ 0.07
SPDL1-211ENST00000512028 LHX8Q68G74 356 aa15.48■□□□□ 0.07
SPDL1-211ENST00000512028 AQRO60306 1485 aaKnown RBP eCLIP15.47■□□□□ 0.07
SPDL1-211ENST00000512028 MAP3K13O43283 966 aa15.46■□□□□ 0.07
SPDL1-211ENST00000512028 KLHL34Q8N239 644 aa15.46■□□□□ 0.07
SPDL1-211ENST00000512028 ASTLQ6HA08 431 aaPredicted RBP15.43■□□□□ 0.06
SPDL1-211ENST00000512028 TARBP1Q13395 1621 aaKnown RBP15.43■□□□□ 0.06
SPDL1-211ENST00000512028 SGIP1Q9BQI5 828 aa15.42■□□□□ 0.06
SPDL1-211ENST00000512028 ABCC8Q09428 1581 aa15.41■□□□□ 0.06
SPDL1-211ENST00000512028 ATMINO43313 823 aaPredicted RBP15.39■□□□□ 0.05
SPDL1-211ENST00000512028 DCAF8Q5TAQ9 597 aa15.39■□□□□ 0.05
SPDL1-211ENST00000512028 DNMBPQ6XZF7 1577 aa15.39■□□□□ 0.05
SPDL1-211ENST00000512028 PELP1Q8IZL8 1130 aaKnown RBP15.36■□□□□ 0.05
SPDL1-211ENST00000512028 PCDHB13Q9Y5F0 798 aa15.36■□□□□ 0.05
SPDL1-211ENST00000512028 CLASP1Q7Z460 1538 aa15.36■□□□□ 0.05
SPDL1-211ENST00000512028 TIE1P35590 1138 aa15.33■□□□□ 0.04
SPDL1-211ENST00000512028 CCDC88BA6NC98 1476 aa15.33■□□□□ 0.04
SPDL1-211ENST00000512028 GSE1Q14687 1217 aa15.31■□□□□ 0.04
SPDL1-211ENST00000512028 IFNLR1Q8IU57 520 aaPredicted RBP15.31■□□□□ 0.04
SPDL1-211ENST00000512028 TRPC6Q9Y210 931 aa15.31■□□□□ 0.04
SPDL1-211ENST00000512028 SYNJ1O43426 1573 aa15.3■□□□□ 0.04
SPDL1-211ENST00000512028 POLA1P09884 1462 aaPredicted RBP15.3■□□□□ 0.04
SPDL1-211ENST00000512028 SLC39A7Q92504 469 aa15.3■□□□□ 0.04
SPDL1-211ENST00000512028 BMP2KQ9NSY1 1161 aaPredicted RBP15.3■□□□□ 0.04
SPDL1-211ENST00000512028 ATN1P54259 1190 aaPredicted RBP15.29■□□□□ 0.04
SPDL1-211ENST00000512028 TDRD9Q8NDG6 1382 aaKnown RBP15.28■□□□□ 0.04
SPDL1-211ENST00000512028 C7P10643 843 aa15.28■□□□□ 0.04
SPDL1-211ENST00000512028 SNAPC4Q5SXM2 1469 aa15.27■□□□□ 0.04
SPDL1-211ENST00000512028 RAD54L2Q9Y4B4 1467 aa15.27■□□□□ 0.04
SPDL1-211ENST00000512028 CHMP7Q8WUX9 453 aaPredicted RBP15.27■□□□□ 0.04
SPDL1-211ENST00000512028 IFNL1Q8IU54 200 aa15.26■□□□□ 0.03
SPDL1-211ENST00000512028 SPOCK2Q92563 424 aa15.26■□□□□ 0.03
SPDL1-211ENST00000512028 PYGBP11216 843 aa15.25■□□□□ 0.03
SPDL1-211ENST00000512028 METRNQ9UJH8 293 aa15.25■□□□□ 0.03
SPDL1-211ENST00000512028 GAPVD1Q14C86 1478 aa15.25■□□□□ 0.03
SPDL1-211ENST00000512028 TTLL13PA6NNM8 815 aa15.22■□□□□ 0.03
SPDL1-211ENST00000512028 SOGA1O94964 1423 aa15.22■□□□□ 0.03
SPDL1-211ENST00000512028 MAGI1Q96QZ7 1491 aaPredicted RBP15.2■□□□□ 0.02
SPDL1-211ENST00000512028 WDR97A6NE52 1622 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms