RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 PRG4Q92954 1404 aaPredicted RBP28.16■■■□□ 2.1
DDX41-213ENST00000512027 JPH4Q96JJ6 628 aa28.13■■■□□ 2.09
DDX41-213ENST00000512027 KIAA0586Q9BVV6 1533 aa28.11■■■□□ 2.09
DDX41-213ENST00000512027 RAPGEF2Q9Y4G8 1499 aa28.02■■■□□ 2.08
DDX41-213ENST00000512027 IQGAP2Q13576 1575 aa27.99■■■□□ 2.07
DDX41-213ENST00000512027 TRHP20396 242 aaPredicted RBP27.98■■■□□ 2.07
DDX41-213ENST00000512027 CTTNBP2Q8WZ74 1663 aa27.89■■■□□ 2.06
DDX41-213ENST00000512027 PRXQ9BXM0 1461 aa27.87■■■□□ 2.05
DDX41-213ENST00000512027 ADCY10Q96PN6 1610 aa27.83■■■□□ 2.05
DDX41-213ENST00000512027 TTBK1Q5TCY1 1321 aaPredicted RBP27.82■■■□□ 2.04
DDX41-213ENST00000512027 DISP1Q96F81 1524 aa27.81■■■□□ 2.04
DDX41-213ENST00000512027 CARMIL2Q6F5E8 1435 aa27.79■■■□□ 2.04
DDX41-213ENST00000512027 UGGT2Q9NYU1 1516 aa27.78■■■□□ 2.04
DDX41-213ENST00000512027 PTPRGP23470 1445 aa27.75■■■□□ 2.03
DDX41-213ENST00000512027 KIAA0556O60303 1618 aa27.74■■■□□ 2.03
DDX41-213ENST00000512027 CHIC1Q5VXU3 224 aa27.74■■■□□ 2.03
DDX41-213ENST00000512027 CSRNP3Q8WYN3 585 aa27.74■■■□□ 2.03
DDX41-213ENST00000512027 TNIKQ9UKE5 1360 aa27.73■■■□□ 2.03
DDX41-213ENST00000512027 FAM9AQ8IZU1 332 aaPredicted RBP27.73■■■□□ 2.03
DDX41-213ENST00000512027 EEA1Q15075 1411 aa27.69■■■□□ 2.02
DDX41-213ENST00000512027 KIF13AQ9H1H9 1805 aa27.69■■■□□ 2.02
DDX41-213ENST00000512027 MAPKBP1O60336 1514 aa27.62■■■□□ 2.01
DDX41-213ENST00000512027 NPM1P06748 294 aaKnown RBP eCLIP27.61■■■□□ 2.01
DDX41-213ENST00000512027 UACAQ9BZF9 1416 aa27.57■■■□□ 2
DDX41-213ENST00000512027 GOLGA3Q08378 1498 aa27.56■■■□□ 2
DDX41-213ENST00000512027 ABCC2Q92887 1545 aa27.56■■■□□ 2
DDX41-213ENST00000512027 DIP2BQ9P265 1576 aa27.55■■■□□ 2
DDX41-213ENST00000512027 UHRF1BP1LA0JNW5 1464 aa27.54■■■□□ 2
DDX41-213ENST00000512027 KIF21BO75037 1637 aa27.54■■■□□ 2
DDX41-213ENST00000512027 ABCC10Q5T3U5 1492 aa27.52■■■□□ 2
DDX41-213ENST00000512027 PLB1Q6P1J6 1458 aa27.49■■□□□ 1.99
DDX41-213ENST00000512027 FAM69CQ0P6D2 419 aa27.47■■□□□ 1.99
DDX41-213ENST00000512027 EHMT2Q96KQ7 1210 aa27.47■■□□□ 1.99
DDX41-213ENST00000512027 ZCCHC11Q5TAX3 1644 aaKnown RBP27.47■■□□□ 1.99
DDX41-213ENST00000512027 SAMD9Q5K651 1589 aa27.47■■□□□ 1.99
DDX41-213ENST00000512027 P3H3Q8IVL6 736 aa27.46■■□□□ 1.99
DDX41-213ENST00000512027 KDM5BQ9UGL1 1544 aa27.43■■□□□ 1.98
DDX41-213ENST00000512027 RANGAP1P46060 587 aaPredicted RBP27.43■■□□□ 1.98
DDX41-213ENST00000512027 ABCA8O94911 1581 aa27.43■■□□□ 1.98
DDX41-213ENST00000512027 ASXL2Q76L83 1435 aa27.42■■□□□ 1.98
DDX41-213ENST00000512027 TSPOAP1O95153 1857 aa27.4■■□□□ 1.98
DDX41-213ENST00000512027 FHOD3Q2V2M9 1422 aa27.31■■□□□ 1.96
DDX41-213ENST00000512027 GLI2P10070 1586 aa27.27■■□□□ 1.96
DDX41-213ENST00000512027 ARID3CA6NKF2 412 aa27.27■■□□□ 1.96
DDX41-213ENST00000512027 EPRSP07814 1512 aaKnown RBP27.26■■□□□ 1.96
DDX41-213ENST00000512027 UBTFP17480 764 aaKnown RBP27.26■■□□□ 1.95
DDX41-213ENST00000512027 RAPGEF6Q8TEU7 1601 aa27.26■■□□□ 1.95
DDX41-213ENST00000512027 PPRC1Q5VV67 1664 aaKnown RBP27.25■■□□□ 1.95
DDX41-213ENST00000512027 WDR7Q9Y4E6 1490 aa27.24■■□□□ 1.95
DDX41-213ENST00000512027 EFCAB5A4FU69 1503 aa27.23■■□□□ 1.95
DDX41-213ENST00000512027 MAP3K4Q9Y6R4 1608 aa27.2■■□□□ 1.95
DDX41-213ENST00000512027 ATP10BO94823 1461 aa27.18■■□□□ 1.94
DDX41-213ENST00000512027 KDM6BO15054 1643 aa27.16■■□□□ 1.94
DDX41-213ENST00000512027 NUP153P49790 1475 aaKnown RBP27.14■■□□□ 1.94
DDX41-213ENST00000512027 KCNH8Q96L42 1107 aa27.11■■□□□ 1.93
DDX41-213ENST00000512027 ARHGAP35Q9NRY4 1499 aa27.11■■□□□ 1.93
DDX41-213ENST00000512027 CFAP43Q8NDM7 1665 aa27.08■■□□□ 1.92
DDX41-213ENST00000512027 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.04■■□□□ 1.92
DDX41-213ENST00000512027 HNRNPUL2Q1KMD3 747 aaKnown RBP27.04■■□□□ 1.92
DDX41-213ENST00000512027 TEX14Q8IWB6 1497 aa27■■□□□ 1.91
DDX41-213ENST00000512027 CD109Q6YHK3 1445 aa26.99■■□□□ 1.91
DDX41-213ENST00000512027 CDK13Q14004 1512 aaKnown RBP26.98■■□□□ 1.91
DDX41-213ENST00000512027 COL17A1Q9UMD9 1497 aaPredicted RBP26.97■■□□□ 1.91
DDX41-213ENST00000512027 ABCA9Q8IUA7 1624 aa26.96■■□□□ 1.91
DDX41-213ENST00000512027 FMN1Q68DA7 1419 aa26.95■■□□□ 1.9
DDX41-213ENST00000512027 MAGI3Q5TCQ9 1506 aa26.94■■□□□ 1.9
DDX41-213ENST00000512027 HECW1Q76N89 1606 aa26.94■■□□□ 1.9
DDX41-213ENST00000512027 LRRIQ1Q96JM4 1722 aa26.91■■□□□ 1.9
DDX41-213ENST00000512027 ATP1B4Q9UN42 357 aaPredicted RBP26.91■■□□□ 1.9
DDX41-213ENST00000512027 PCF11O94913 1555 aaKnown RBP26.86■■□□□ 1.89
DDX41-213ENST00000512027 CLIP1P30622 1438 aa26.84■■□□□ 1.89
DDX41-213ENST00000512027 PLEKHD1A6NEE1 506 aa26.84■■□□□ 1.89
DDX41-213ENST00000512027 TTC37Q6PGP7 1564 aa26.82■■□□□ 1.88
DDX41-213ENST00000512027 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.8■■□□□ 1.88
DDX41-213ENST00000512027 CASKIN1Q8WXD9 1431 aa26.74■■□□□ 1.87
DDX41-213ENST00000512027 KIF14Q15058 1648 aa26.73■■□□□ 1.87
DDX41-213ENST00000512027 ARAP3Q8WWN8 1544 aa26.72■■□□□ 1.87
DDX41-213ENST00000512027 AEBP2Q6ZN18 517 aaPredicted RBP26.71■■□□□ 1.87
DDX41-213ENST00000512027 NEO1Q92859 1461 aa26.69■■□□□ 1.86
DDX41-213ENST00000512027 FYCO1Q9BQS8 1478 aa26.68■■□□□ 1.86
DDX41-213ENST00000512027 CEP162Q5TB80 1403 aa26.67■■□□□ 1.86
DDX41-213ENST00000512027 LOC105371045A0A1W2PR82 267 aa26.66■■□□□ 1.86
DDX41-213ENST00000512027 TROQ12816 1431 aaPredicted RBP26.65■■□□□ 1.86
DDX41-213ENST00000512027 CCDC18Q5T9S5 1454 aa26.65■■□□□ 1.86
DDX41-213ENST00000512027 FRMPD1Q5SYB0 1578 aa26.65■■□□□ 1.86
DDX41-213ENST00000512027 FANCAO15360 1455 aa26.64■■□□□ 1.86
DDX41-213ENST00000512027 MYO5CQ9NQX4 1742 aa26.64■■□□□ 1.85
DDX41-213ENST00000512027 CFAP74Q9C0B2 1584 aa26.63■■□□□ 1.85
DDX41-213ENST00000512027 CDK11AQ9UQ88 783 aaPredicted RBP26.63■■□□□ 1.85
DDX41-213ENST00000512027 KDM4FA0A1W2PPD8 638 aa26.62■■□□□ 1.85
DDX41-213ENST00000512027 PHLDB1Q86UU1 1377 aa26.61■■□□□ 1.85
DDX41-213ENST00000512027 RAPGEF3O95398 923 aa26.61■■□□□ 1.85
DDX41-213ENST00000512027 AKNAQ7Z591 1439 aa26.59■■□□□ 1.85
DDX41-213ENST00000512027 RICTORQ6R327 1708 aa26.58■■□□□ 1.85
DDX41-213ENST00000512027 PLCH2O75038 1416 aa26.57■■□□□ 1.84
DDX41-213ENST00000512027 ADGRL1O94910 1474 aa26.57■■□□□ 1.84
DDX41-213ENST00000512027 DENND4BO75064 1496 aaPredicted RBP26.53■■□□□ 1.84
DDX41-213ENST00000512027 CDC42BPBQ9Y5S2 1711 aa26.52■■□□□ 1.84
DDX41-213ENST00000512027 ARHGAP5Q13017 1502 aa26.49■■□□□ 1.83
DDX41-213ENST00000512027 PREX2Q70Z35 1606 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms