RNA–Protein interactions for RNA: ENST00000511810.5

SDHA-214, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 3,001 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-214ENST00000511810 FHOD3Q2V2M9 1422 aa15.2■□□□□ 0.02
SDHA-214ENST00000511810 MRC2Q9UBG0 1479 aa15.19■□□□□ 0.02
SDHA-214ENST00000511810 PHF23Q9BUL5 403 aaPredicted RBP15.17■□□□□ 0.02
SDHA-214ENST00000511810 TIAM1Q13009 1591 aa15.17■□□□□ 0.02
SDHA-214ENST00000511810 ATP1B4Q9UN42 357 aaPredicted RBP15.16■□□□□ 0.02
SDHA-214ENST00000511810 AQRO60306 1485 aaKnown RBP eCLIP15.16■□□□□ 0.021e-7■■■■■ 30.9
SDHA-214ENST00000511810 PCF11O94913 1555 aaKnown RBP15.16■□□□□ 0.02
SDHA-214ENST00000511810 FHAD1B1AJZ9 1412 aa15.15■□□□□ 0.02
SDHA-214ENST00000511810 RRBP1Q9P2E9 1410 aaKnown RBP15.13■□□□□ 0.01
SDHA-214ENST00000511810 EFCAB5A4FU69 1503 aa15.13■□□□□ 0.01
SDHA-214ENST00000511810 PBRM1Q86U86 1689 aa15.12■□□□□ 0.01
SDHA-214ENST00000511810 MAP3K1Q13233 1512 aa15.11■□□□□ 0.01
SDHA-214ENST00000511810 LRRC9Q6ZRR7 1453 aa15.11■□□□□ 0.01
SDHA-214ENST00000511810 CCNB3Q8WWL7 1395 aa15.1■□□□□ 0.01
SDHA-214ENST00000511810 ZNF608Q9ULD9 1512 aaPredicted RBP15.09■□□□□ 0.01
SDHA-214ENST00000511810 ITGAEP38570 1179 aa15.08■□□□□ 0
SDHA-214ENST00000511810 CFAP43Q8NDM7 1665 aa15.08■□□□□ 0
SDHA-214ENST00000511810 WDR62O43379 1518 aa15.08■□□□□ 0
SDHA-214ENST00000511810 CASKIN1Q8WXD9 1431 aa15.06■□□□□ 0
SDHA-214ENST00000511810 FYCO1Q9BQS8 1478 aa15.06■□□□□ 0
SDHA-214ENST00000511810 ERCC6Q03468 1493 aa15.05■□□□□ 0
SDHA-214ENST00000511810 SAMD9Q5K651 1589 aa15.05■□□□□ 0
SDHA-214ENST00000511810 PHLDB1Q86UU1 1377 aa15.05■□□□□ -0
SDHA-214ENST00000511810 ADAMTS12P58397 1594 aa15.04■□□□□ -0
SDHA-214ENST00000511810 GRIN2BQ13224 1484 aa15.04■□□□□ -0
SDHA-214ENST00000511810 IFT140Q96RY7 1462 aa15.04■□□□□ -0
SDHA-214ENST00000511810 FMN1Q68DA7 1419 aa15.04■□□□□ -0
SDHA-214ENST00000511810 SNAPC4Q5SXM2 1469 aa15.03■□□□□ -0
SDHA-214ENST00000511810 DHX57Q6P158 1386 aaKnown RBP14.99□□□□□ -0.01
SDHA-214ENST00000511810 LRRIQ1Q96JM4 1722 aa14.99□□□□□ -0.01
SDHA-214ENST00000511810 THOC2Q8NI27 1593 aaKnown RBP14.98□□□□□ -0.01
SDHA-214ENST00000511810 FAM50AQ14320 339 aaKnown RBP14.98□□□□□ -0.01
SDHA-214ENST00000511810 IQGAP2Q13576 1575 aa14.97□□□□□ -0.01
SDHA-214ENST00000511810 EIF4G3O43432 1585 aaKnown RBP14.97□□□□□ -0.01
SDHA-214ENST00000511810 MTUS2Q5JR59 1369 aa14.93□□□□□ -0.02
SDHA-214ENST00000511810 RAB3GAP2Q9H2M9 1393 aa14.91□□□□□ -0.02
SDHA-214ENST00000511810 DIEXFQ68CQ4 756 aaKnown RBP14.9□□□□□ -0.02
SDHA-214ENST00000511810 ZNF316A6NFI3 1004 aaPredicted RBP14.89□□□□□ -0.03
SDHA-214ENST00000511810 GRIN2AQ12879 1464 aa14.89□□□□□ -0.03
SDHA-214ENST00000511810 CLSPNQ9HAW4 1339 aa14.88□□□□□ -0.03
SDHA-214ENST00000511810 ARID3CA6NKF2 412 aa14.88□□□□□ -0.03
SDHA-214ENST00000511810 UGGT2Q9NYU1 1516 aa14.87□□□□□ -0.03
SDHA-214ENST00000511810 KIAA0586Q9BVV6 1533 aa14.87□□□□□ -0.03
SDHA-214ENST00000511810 FGD6Q6ZV73 1430 aa14.87□□□□□ -0.03
SDHA-214ENST00000511810 MAGI3Q5TCQ9 1506 aa14.86□□□□□ -0.03
SDHA-214ENST00000511810 SETD5Q9C0A6 1442 aa14.86□□□□□ -0.03
SDHA-214ENST00000511810 FBLN2P98095 1184 aa14.86□□□□□ -0.03
SDHA-214ENST00000511810 NCOA2Q15596 1464 aa14.85□□□□□ -0.03
SDHA-214ENST00000511810 CHMP7Q8WUX9 453 aaPredicted RBP14.84□□□□□ -0.03
SDHA-214ENST00000511810 DISP1Q96F81 1524 aa14.84□□□□□ -0.03
SDHA-214ENST00000511810 HECW1Q76N89 1606 aa14.84□□□□□ -0.03
SDHA-214ENST00000511810 CDK13Q14004 1512 aaKnown RBP14.83□□□□□ -0.04
SDHA-214ENST00000511810 MAGI1Q96QZ7 1491 aaPredicted RBP14.83□□□□□ -0.04
SDHA-214ENST00000511810 EHBP1L1Q8N3D4 1523 aa14.83□□□□□ -0.04
SDHA-214ENST00000511810 SUPT6HQ7KZ85 1726 aaKnown RBP14.83□□□□□ -0.04
SDHA-214ENST00000511810 EPRSP07814 1512 aaKnown RBP14.82□□□□□ -0.04
SDHA-214ENST00000511810 CCDC18Q5T9S5 1454 aa14.82□□□□□ -0.04
SDHA-214ENST00000511810 KIAA0556O60303 1618 aa14.82□□□□□ -0.04
SDHA-214ENST00000511810 SYNJ2O15056 1496 aa14.81□□□□□ -0.04
SDHA-214ENST00000511810 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.81□□□□□ -0.04
SDHA-214ENST00000511810 CEP170Q5SW79 1584 aa14.81□□□□□ -0.04
SDHA-214ENST00000511810 MYOM3Q5VTT5 1437 aa14.81□□□□□ -0.04
SDHA-214ENST00000511810 MAPKBP1O60336 1514 aa14.79□□□□□ -0.04
SDHA-214ENST00000511810 PTPRKQ15262 1439 aa14.78□□□□□ -0.04
SDHA-214ENST00000511810 ARHGEF11O15085 1522 aa14.77□□□□□ -0.05
SDHA-214ENST00000511810 PTPN23Q9H3S7 1636 aa14.74□□□□□ -0.05
SDHA-214ENST00000511810 NUP153P49790 1475 aaKnown RBP14.73□□□□□ -0.05
SDHA-214ENST00000511810 NUP160Q12769 1436 aa14.73□□□□□ -0.05
SDHA-214ENST00000511810 RAPGEF6Q8TEU7 1601 aa14.72□□□□□ -0.05
SDHA-214ENST00000511810 JPH4Q96JJ6 628 aa14.72□□□□□ -0.05
SDHA-214ENST00000511810 SIN3AQ96ST3 1273 aa14.72□□□□□ -0.05
SDHA-214ENST00000511810 PLB1Q6P1J6 1458 aa14.69□□□□□ -0.06
SDHA-214ENST00000511810 NEUROD1Q13562 356 aa14.69□□□□□ -0.06
SDHA-214ENST00000511810 HFM1A2PYH4 1435 aa14.69□□□□□ -0.06
SDHA-214ENST00000511810 CHIC2Q9UKJ5 165 aa14.68□□□□□ -0.06
SDHA-214ENST00000511810 NAIPQ13075 1403 aa14.67□□□□□ -0.06
SDHA-214ENST00000511810 TCOF1Q13428 1488 aaKnown RBP14.67□□□□□ -0.06
SDHA-214ENST00000511810 RRP7BPQ9NSQ0 103 aa14.66□□□□□ -0.06
SDHA-214ENST00000511810 CARMIL2Q6F5E8 1435 aa14.66□□□□□ -0.06
SDHA-214ENST00000511810 SENP3Q9H4L4 574 aaPredicted RBP14.66□□□□□ -0.06
SDHA-214ENST00000511810 MIER1Q8N108 512 aa14.64□□□□□ -0.07
SDHA-214ENST00000511810 PRG4Q92954 1404 aaPredicted RBP14.64□□□□□ -0.07
SDHA-214ENST00000511810 MIA2Q96PC5 1412 aa14.64□□□□□ -0.07
SDHA-214ENST00000511810 CDK11AQ9UQ88 783 aaPredicted RBP14.63□□□□□ -0.07
SDHA-214ENST00000511810 ZNF644Q9H582 1327 aaPredicted RBP14.62□□□□□ -0.07
SDHA-214ENST00000511810 UACAQ9BZF9 1416 aa14.61□□□□□ -0.07
SDHA-214ENST00000511810 CHD1O14646 1710 aa14.6□□□□□ -0.07
SDHA-214ENST00000511810 TROQ12816 1431 aaPredicted RBP14.59□□□□□ -0.07
SDHA-214ENST00000511810 KDM6BO15054 1643 aa14.58□□□□□ -0.07
SDHA-214ENST00000511810 KIF14Q15058 1648 aa14.57□□□□□ -0.08
SDHA-214ENST00000511810 GCC2Q8IWJ2 1684 aa14.57□□□□□ -0.08
SDHA-214ENST00000511810 ABCA8O94911 1581 aa14.56□□□□□ -0.08
SDHA-214ENST00000511810 DAPK1P53355 1430 aa14.55□□□□□ -0.08
SDHA-214ENST00000511810 ABCC5O15440 1437 aa14.54□□□□□ -0.08
SDHA-214ENST00000511810 TRIM52Q96A61 297 aa14.54□□□□□ -0.08
SDHA-214ENST00000511810 ATP10BO94823 1461 aa14.54□□□□□ -0.08
SDHA-214ENST00000511810 CFDP1Q9UEE9 299 aaPredicted RBP14.53□□□□□ -0.08
SDHA-214ENST00000511810 DNMT1P26358 1616 aaKnown RBP14.53□□□□□ -0.08
SDHA-214ENST00000511810 AKNAQ7Z591 1439 aa14.53□□□□□ -0.08
SDHA-214ENST00000511810 ZNF777Q9ULD5 760 aaPredicted RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms