RNA–Protein interactions for RNA: ENST00000511344.1

CSF1R-205, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 4

Gene CSF1R, Length 655 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-205ENST00000511344 PRXQ9BXM0 1461 aa30.31■■■□□ 2.44
CSF1R-205ENST00000511344 KIAA0586Q9BVV6 1533 aa30.3■■■□□ 2.44
CSF1R-205ENST00000511344 CSRNP3Q8WYN3 585 aa30.27■■■□□ 2.44
CSF1R-205ENST00000511344 ARAP1Q96P48 1450 aa30.26■■■□□ 2.44
CSF1R-205ENST00000511344 ERCC6L2Q5T890 1561 aa30.25■■■□□ 2.43
CSF1R-205ENST00000511344 FAM9AQ8IZU1 332 aaPredicted RBP30.22■■■□□ 2.43
CSF1R-205ENST00000511344 JPH4Q96JJ6 628 aa30.2■■■□□ 2.43
CSF1R-205ENST00000511344 PRG4Q92954 1404 aaPredicted RBP30.18■■■□□ 2.42
CSF1R-205ENST00000511344 IQGAP2Q13576 1575 aa30.17■■■□□ 2.42
CSF1R-205ENST00000511344 CYB5RLQ6IPT4 315 aa30.15■■■□□ 2.42
CSF1R-205ENST00000511344 CTTNBP2Q8WZ74 1663 aa30.12■■■□□ 2.41
CSF1R-205ENST00000511344 KIF21BO75037 1637 aa30.07■■■□□ 2.4
CSF1R-205ENST00000511344 UGGT2Q9NYU1 1516 aa30.01■■■□□ 2.39
CSF1R-205ENST00000511344 DISP1Q96F81 1524 aa29.95■■■□□ 2.38
CSF1R-205ENST00000511344 CARMIL2Q6F5E8 1435 aa29.95■■■□□ 2.38
CSF1R-205ENST00000511344 KIAA0556O60303 1618 aa29.89■■■□□ 2.38
CSF1R-205ENST00000511344 GOLGA3Q08378 1498 aa29.87■■■□□ 2.37
CSF1R-205ENST00000511344 TNIKQ9UKE5 1360 aa29.85■■■□□ 2.37
CSF1R-205ENST00000511344 EHMT2Q96KQ7 1210 aa29.83■■■□□ 2.37
CSF1R-205ENST00000511344 PTPRGP23470 1445 aa29.81■■■□□ 2.36
CSF1R-205ENST00000511344 TTBK1Q5TCY1 1321 aaPredicted RBP29.76■■■□□ 2.36
CSF1R-205ENST00000511344 SAMD9Q5K651 1589 aa29.74■■■□□ 2.35
CSF1R-205ENST00000511344 UBTFP17480 764 aaKnown RBP29.74■■■□□ 2.35
CSF1R-205ENST00000511344 ADCY10Q96PN6 1610 aa29.74■■■□□ 2.35
CSF1R-205ENST00000511344 RANGAP1P46060 587 aaPredicted RBP29.67■■■□□ 2.34
CSF1R-205ENST00000511344 P3H3Q8IVL6 736 aa29.63■■■□□ 2.33
CSF1R-205ENST00000511344 UACAQ9BZF9 1416 aa29.62■■■□□ 2.33
CSF1R-205ENST00000511344 EFCAB5A4FU69 1503 aa29.61■■■□□ 2.33
CSF1R-205ENST00000511344 UHRF1BP1LA0JNW5 1464 aa29.61■■■□□ 2.33
CSF1R-205ENST00000511344 ABCC2Q92887 1545 aa29.6■■■□□ 2.33
CSF1R-205ENST00000511344 PLB1Q6P1J6 1458 aa29.57■■■□□ 2.32
CSF1R-205ENST00000511344 FHOD3Q2V2M9 1422 aa29.55■■■□□ 2.32
CSF1R-205ENST00000511344 ABCA8O94911 1581 aa29.55■■■□□ 2.32
CSF1R-205ENST00000511344 NPM1P06748 294 aaKnown RBP eCLIP29.53■■■□□ 2.32
CSF1R-205ENST00000511344 MAPKBP1O60336 1514 aa29.5■■■□□ 2.31
CSF1R-205ENST00000511344 ARHGAP35Q9NRY4 1499 aa29.49■■■□□ 2.31
CSF1R-205ENST00000511344 TRHP20396 242 aaPredicted RBP29.48■■■□□ 2.31
CSF1R-205ENST00000511344 KDM5BQ9UGL1 1544 aa29.47■■■□□ 2.31
CSF1R-205ENST00000511344 ZCCHC11Q5TAX3 1644 aaKnown RBP29.44■■■□□ 2.3
CSF1R-205ENST00000511344 RAPGEF6Q8TEU7 1601 aa29.42■■■□□ 2.3
CSF1R-205ENST00000511344 KIF13AQ9H1H9 1805 aa29.36■■■□□ 2.29
CSF1R-205ENST00000511344 ASXL2Q76L83 1435 aa29.36■■■□□ 2.29
CSF1R-205ENST00000511344 CLIP1P30622 1438 aa29.34■■■□□ 2.29
CSF1R-205ENST00000511344 ABCC10Q5T3U5 1492 aa29.34■■■□□ 2.29
CSF1R-205ENST00000511344 LOC105371045A0A1W2PR82 267 aa29.33■■■□□ 2.29
CSF1R-205ENST00000511344 DIP2BQ9P265 1576 aa29.33■■■□□ 2.29
CSF1R-205ENST00000511344 NUP153P49790 1475 aaKnown RBP29.31■■■□□ 2.28
CSF1R-205ENST00000511344 FMN1Q68DA7 1419 aa29.3■■■□□ 2.28
CSF1R-205ENST00000511344 ARID3CA6NKF2 412 aa29.28■■■□□ 2.28
CSF1R-205ENST00000511344 ATP10BO94823 1461 aa29.28■■■□□ 2.28
CSF1R-205ENST00000511344 CEP162Q5TB80 1403 aa29.25■■■□□ 2.27
CSF1R-205ENST00000511344 FAM69CQ0P6D2 419 aa29.24■■■□□ 2.27
CSF1R-205ENST00000511344 WDR7Q9Y4E6 1490 aa29.23■■■□□ 2.27
CSF1R-205ENST00000511344 HECW1Q76N89 1606 aa29.2■■■□□ 2.26
CSF1R-205ENST00000511344 EPRSP07814 1512 aaKnown RBP29.19■■■□□ 2.26
CSF1R-205ENST00000511344 GLI2P10070 1586 aa29.18■■■□□ 2.26
CSF1R-205ENST00000511344 PCF11O94913 1555 aaKnown RBP29.16■■■□□ 2.26
CSF1R-205ENST00000511344 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.13■■■□□ 2.25
CSF1R-205ENST00000511344 HNRNPUL2Q1KMD3 747 aaKnown RBP29.13■■■□□ 2.25
CSF1R-205ENST00000511344 CDK13Q14004 1512 aaKnown RBP29.13■■■□□ 2.25
CSF1R-205ENST00000511344 CASKIN1Q8WXD9 1431 aa29.11■■■□□ 2.25
CSF1R-205ENST00000511344 ATP1B4Q9UN42 357 aaPredicted RBP29.1■■■□□ 2.25
CSF1R-205ENST00000511344 LRRIQ1Q96JM4 1722 aa29.08■■■□□ 2.25
CSF1R-205ENST00000511344 MAP3K4Q9Y6R4 1608 aa29.07■■■□□ 2.24
CSF1R-205ENST00000511344 TSPOAP1O95153 1857 aa29.06■■■□□ 2.24
CSF1R-205ENST00000511344 FYCO1Q9BQS8 1478 aa29.06■■■□□ 2.24
CSF1R-205ENST00000511344 KCNH8Q96L42 1107 aa29.06■■■□□ 2.24
CSF1R-205ENST00000511344 PPRC1Q5VV67 1664 aaKnown RBP29.02■■■□□ 2.24
CSF1R-205ENST00000511344 CFAP43Q8NDM7 1665 aa28.99■■■□□ 2.23
CSF1R-205ENST00000511344 PLEKHD1A6NEE1 506 aa28.99■■■□□ 2.23
CSF1R-205ENST00000511344 CCDC18Q5T9S5 1454 aa28.98■■■□□ 2.23
CSF1R-205ENST00000511344 ABCA9Q8IUA7 1624 aa28.96■■■□□ 2.23
CSF1R-205ENST00000511344 CD109Q6YHK3 1445 aa28.93■■■□□ 2.22
CSF1R-205ENST00000511344 CDK11AQ9UQ88 783 aaPredicted RBP28.89■■■□□ 2.22
CSF1R-205ENST00000511344 VPS8Q8N3P4 1428 aa28.88■■■□□ 2.21
CSF1R-205ENST00000511344 MAGI3Q5TCQ9 1506 aa28.88■■■□□ 2.21
CSF1R-205ENST00000511344 TEX14Q8IWB6 1497 aa28.87■■■□□ 2.21
CSF1R-205ENST00000511344 TROQ12816 1431 aaPredicted RBP28.86■■■□□ 2.21
CSF1R-205ENST00000511344 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.86■■■□□ 2.21
CSF1R-205ENST00000511344 TTC37Q6PGP7 1564 aa28.85■■■□□ 2.21
CSF1R-205ENST00000511344 KIF14Q15058 1648 aa28.83■■■□□ 2.21
CSF1R-205ENST00000511344 KDM6BO15054 1643 aa28.81■■■□□ 2.2
CSF1R-205ENST00000511344 COL17A1Q9UMD9 1497 aaPredicted RBP28.71■■■□□ 2.19
CSF1R-205ENST00000511344 TIAM1Q13009 1591 aa28.7■■■□□ 2.18
CSF1R-205ENST00000511344 MYO5CQ9NQX4 1742 aa28.69■■■□□ 2.18
CSF1R-205ENST00000511344 NEO1Q92859 1461 aa28.68■■■□□ 2.18
CSF1R-205ENST00000511344 MTUS2Q5JR59 1369 aa28.67■■■□□ 2.18
CSF1R-205ENST00000511344 EHBP1L1Q8N3D4 1523 aa28.67■■■□□ 2.18
CSF1R-205ENST00000511344 PLCH2O75038 1416 aa28.67■■■□□ 2.18
CSF1R-205ENST00000511344 FANCAO15360 1455 aa28.65■■■□□ 2.18
CSF1R-205ENST00000511344 CFAP74Q9C0B2 1584 aa28.64■■■□□ 2.18
CSF1R-205ENST00000511344 ARAP3Q8WWN8 1544 aa28.63■■■□□ 2.17
CSF1R-205ENST00000511344 PHLDB1Q86UU1 1377 aa28.62■■■□□ 2.17
CSF1R-205ENST00000511344 MAP3K1Q13233 1512 aa28.61■■■□□ 2.17
CSF1R-205ENST00000511344 PREX2Q70Z35 1606 aa28.6■■■□□ 2.17
CSF1R-205ENST00000511344 AKNAQ7Z591 1439 aa28.58■■■□□ 2.17
CSF1R-205ENST00000511344 CDC42BPAQ5VT25 1732 aa28.57■■■□□ 2.16
CSF1R-205ENST00000511344 CDC42BPBQ9Y5S2 1711 aa28.57■■■□□ 2.16
CSF1R-205ENST00000511344 ARHGAP5Q13017 1502 aa28.57■■■□□ 2.16
CSF1R-205ENST00000511344 LRRC9Q6ZRR7 1453 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms