RNA–Protein interactions for RNA: ENST00000511072.5

PRDM16-206, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-206ENST00000511072 GOLGA3Q08378 1498 aa19.36■□□□□ 0.69
PRDM16-206ENST00000511072 RB1CC1Q8TDY2 1594 aa19.35■□□□□ 0.69
PRDM16-206ENST00000511072 EIF5BO60841 1220 aaKnown RBP19.35■□□□□ 0.69
PRDM16-206ENST00000511072 MRS2Q9HD23 443 aa19.35■□□□□ 0.69
PRDM16-206ENST00000511072 TMC1Q8TDI8 760 aa19.34■□□□□ 0.69
PRDM16-206ENST00000511072 SOGA1O94964 1423 aa19.31■□□□□ 0.68
PRDM16-206ENST00000511072 TNIKQ9UKE5 1360 aa19.31■□□□□ 0.68
PRDM16-206ENST00000511072 SIN3AQ96ST3 1273 aa19.31■□□□□ 0.68
PRDM16-206ENST00000511072 KCNH8Q96L42 1107 aa19.3■□□□□ 0.68
PRDM16-206ENST00000511072 EEA1Q15075 1411 aa19.29■□□□□ 0.68
PRDM16-206ENST00000511072 BAZ1BQ9UIG0 1483 aaKnown RBP19.28■□□□□ 0.68
PRDM16-206ENST00000511072 ZBTB47Q9UFB7 747 aaPredicted RBP19.27■□□□□ 0.68
PRDM16-206ENST00000511072 NEFMP07197 916 aa19.26■□□□□ 0.67
PRDM16-206ENST00000511072 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.26■□□□□ 0.67
PRDM16-206ENST00000511072 RGL3Q3MIN7 710 aa19.26■□□□□ 0.67
PRDM16-206ENST00000511072 NPM1P06748 294 aaKnown RBP eCLIP19.26■□□□□ 0.67
PRDM16-206ENST00000511072 STAG3Q9UJ98 1225 aa19.25■□□□□ 0.67
PRDM16-206ENST00000511072 EIF4G2P78344 907 aaKnown RBP eCLIP19.24■□□□□ 0.67
PRDM16-206ENST00000511072 NACADO15069 1562 aa19.23■□□□□ 0.67
PRDM16-206ENST00000511072 ANP32AP39687 249 aaKnown RBP19.22■□□□□ 0.67
PRDM16-206ENST00000511072 KIF27Q86VH2 1401 aa19.21■□□□□ 0.67
PRDM16-206ENST00000511072 ESF1Q9H501 851 aaKnown RBP19.2■□□□□ 0.66
PRDM16-206ENST00000511072 CEP164Q9UPV0 1460 aa19.17■□□□□ 0.66
PRDM16-206ENST00000511072 PLEKHD1A6NEE1 506 aa19.17■□□□□ 0.66
PRDM16-206ENST00000511072 CFDP1Q9UEE9 299 aaPredicted RBP19.14■□□□□ 0.65
PRDM16-206ENST00000511072 MROH2BQ7Z745 1585 aa19.14■□□□□ 0.65
PRDM16-206ENST00000511072 BAZ1AQ9NRL2 1556 aaPredicted RBP19.12■□□□□ 0.65
PRDM16-206ENST00000511072 KANK4Q5T7N3 995 aaPredicted RBP19.11■□□□□ 0.65
PRDM16-206ENST00000511072 MSH5O43196 834 aa19.08■□□□□ 0.65
PRDM16-206ENST00000511072 CCDC88BA6NC98 1476 aa19.07■□□□□ 0.64
PRDM16-206ENST00000511072 ABCC8Q09428 1581 aa19.06■□□□□ 0.64
PRDM16-206ENST00000511072 WDR43Q15061 677 aaKnown RBP eCLIP19.06■□□□□ 0.64
PRDM16-206ENST00000511072 CARMIL1Q5VZK9 1371 aa19.02■□□□□ 0.64
PRDM16-206ENST00000511072 CCNB3Q8WWL7 1395 aa19.02■□□□□ 0.64
PRDM16-206ENST00000511072 CUX2O14529 1486 aa19■□□□□ 0.63
PRDM16-206ENST00000511072 CARD11Q9BXL7 1154 aa18.98■□□□□ 0.63
PRDM16-206ENST00000511072 PLEKHG5O94827 1062 aa18.98■□□□□ 0.63
PRDM16-206ENST00000511072 FOXD1Q16676 465 aa18.94■□□□□ 0.62
PRDM16-206ENST00000511072 NOP58Q9Y2X3 529 aaKnown RBP18.91■□□□□ 0.62
PRDM16-206ENST00000511072 HSP90AA1P07900 732 aaKnown RBP18.9■□□□□ 0.62
PRDM16-206ENST00000511072 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.9■□□□□ 0.62
PRDM16-206ENST00000511072 VPS8Q8N3P4 1428 aa18.89■□□□□ 0.61
PRDM16-206ENST00000511072 IL27Q8NEV9 243 aa18.88■□□□□ 0.61
PRDM16-206ENST00000511072 TDRD9Q8NDG6 1382 aaKnown RBP18.88■□□□□ 0.61
PRDM16-206ENST00000511072 NEUROD2Q15784 382 aa18.87■□□□□ 0.61
PRDM16-206ENST00000511072 ARXQ96QS3 562 aa18.86■□□□□ 0.61
PRDM16-206ENST00000511072 UPF2Q9HAU5 1272 aaKnown RBP18.85■□□□□ 0.61
PRDM16-206ENST00000511072 FANCIQ9NVI1 1328 aa18.85■□□□□ 0.61
PRDM16-206ENST00000511072 ERICH6BQ5W0A0 696 aa18.83■□□□□ 0.61
PRDM16-206ENST00000511072 DCAF11Q8TEB1 546 aa18.83■□□□□ 0.61
PRDM16-206ENST00000511072 TNNT2P45379 298 aaPredicted RBP18.82■□□□□ 0.6
PRDM16-206ENST00000511072 KNSTRNQ9Y448 316 aa18.82■□□□□ 0.6
PRDM16-206ENST00000511072 PPM1GO15355 546 aaPredicted RBP18.82■□□□□ 0.6
PRDM16-206ENST00000511072 FHAD1B1AJZ9 1412 aa18.82■□□□□ 0.6
PRDM16-206ENST00000511072 PPP1R15AO75807 674 aaPredicted RBP18.8■□□□□ 0.6
PRDM16-206ENST00000511072 CC2D1BQ5T0F9 858 aaKnown RBP18.8■□□□□ 0.6
PRDM16-206ENST00000511072 WIZO95785 1651 aa18.78■□□□□ 0.6
PRDM16-206ENST00000511072 EIF4G1Q04637 1599 aaKnown RBP18.77■□□□□ 0.6
PRDM16-206ENST00000511072 RUSC2Q8N2Y8 1516 aa18.76■□□□□ 0.59
PRDM16-206ENST00000511072 B4GALNT3Q6L9W6 998 aa18.76■□□□□ 0.59
PRDM16-206ENST00000511072 ERCC6Q03468 1493 aa18.76■□□□□ 0.59
PRDM16-206ENST00000511072 RAB3GAP2Q9H2M9 1393 aa18.75■□□□□ 0.59
PRDM16-206ENST00000511072 ZBTB7CA1YPR0 619 aa18.74■□□□□ 0.59
PRDM16-206ENST00000511072 HSPA5P11021 654 aaKnown RBP18.74■□□□□ 0.59
PRDM16-206ENST00000511072 C14orf37Q86TY3 774 aa18.74■□□□□ 0.59
PRDM16-206ENST00000511072 SETD5Q9C0A6 1442 aa18.74■□□□□ 0.59
PRDM16-206ENST00000511072 PKD2Q13563 968 aa18.72■□□□□ 0.59
PRDM16-206ENST00000511072 LAS1LQ9Y4W2 734 aaKnown RBP18.72■□□□□ 0.59
PRDM16-206ENST00000511072 RAPGEF2Q9Y4G8 1499 aa18.68■□□□□ 0.58
PRDM16-206ENST00000511072 UBE2Q2Q8WVN8 375 aa18.68■□□□□ 0.58
PRDM16-206ENST00000511072 ARID4BQ4LE39 1312 aaPredicted RBP18.68■□□□□ 0.58
PRDM16-206ENST00000511072 PAK3O75914 559 aaPredicted RBP18.66■□□□□ 0.58
PRDM16-206ENST00000511072 SAFB2Q14151 953 aaKnown RBP eCLIP18.66■□□□□ 0.58
PRDM16-206ENST00000511072 CDCA8Q53HL2 280 aa18.66■□□□□ 0.58
PRDM16-206ENST00000511072 RGS3P49796 1198 aa18.65■□□□□ 0.58
PRDM16-206ENST00000511072 GLIPR1L2Q4G1C9 344 aa18.65■□□□□ 0.58
PRDM16-206ENST00000511072 MPHOSPH9Q99550 1183 aa18.65■□□□□ 0.58
PRDM16-206ENST00000511072 TIMELESSQ9UNS1 1208 aa18.65■□□□□ 0.58
PRDM16-206ENST00000511072 FRAT1Q92837 279 aaPredicted RBP18.64■□□□□ 0.57
PRDM16-206ENST00000511072 FHOD3Q2V2M9 1422 aa18.62■□□□□ 0.57
PRDM16-206ENST00000511072 CFAP53Q96M91 514 aa18.62■□□□□ 0.57
PRDM16-206ENST00000511072 ARHGAP35Q9NRY4 1499 aa18.62■□□□□ 0.57
PRDM16-206ENST00000511072 A0A0G2JS52 829 aa18.62■□□□□ 0.57
PRDM16-206ENST00000511072 PPP4R2Q9NY27 417 aa18.62■□□□□ 0.57
PRDM16-206ENST00000511072 GGT6Q6P531 493 aa18.61■□□□□ 0.57
PRDM16-206ENST00000511072 PKNOX2Q96KN3 472 aa18.61■□□□□ 0.57
PRDM16-206ENST00000511072 POGKQ9P215 609 aa18.61■□□□□ 0.57
PRDM16-206ENST00000511072 MLECQ14165 292 aa18.6■□□□□ 0.57
PRDM16-206ENST00000511072 L3MBTL2Q969R5 705 aa18.6■□□□□ 0.57
PRDM16-206ENST00000511072 U2SURPO15042 1029 aaKnown RBP18.59■□□□□ 0.57
PRDM16-206ENST00000511072 TMF1P82094 1093 aa18.56■□□□□ 0.56
PRDM16-206ENST00000511072 MYH16Q9H6N6 1097 aa18.56■□□□□ 0.56
PRDM16-206ENST00000511072 CADPSQ9ULU8 1353 aa18.56■□□□□ 0.56
PRDM16-206ENST00000511072 TOP2AP11388 1531 aaKnown RBP18.56■□□□□ 0.56
PRDM16-206ENST00000511072 ANP32BQ92688 251 aaKnown RBP18.55■□□□□ 0.56
PRDM16-206ENST00000511072 SMARCA2P51531 1590 aa18.55■□□□□ 0.56
PRDM16-206ENST00000511072 NUP155O75694 1391 aa18.55■□□□□ 0.56
PRDM16-206ENST00000511072 SOX12O15370 315 aa18.54■□□□□ 0.56
PRDM16-206ENST00000511072 CCER2I3L3R5 266 aa18.54■□□□□ 0.56
PRDM16-206ENST00000511072 ATAD2BQ9ULI0 1458 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms