RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 DNAJC5Q9H3Z4 198 aa17.26■□□□□ 0.35
NR1I3-227ENST00000510951 RIMBP3CA6NJZ7 1639 aa17.22■□□□□ 0.35
NR1I3-227ENST00000510951 RIMBP3BA6NNM3 1639 aa17.22■□□□□ 0.35
NR1I3-227ENST00000510951 SHROOM2Q13796 1616 aa17.22■□□□□ 0.35
NR1I3-227ENST00000510951 RIMBP3Q9UFD9 1639 aa17.22■□□□□ 0.35
NR1I3-227ENST00000510951 IQGAP2Q13576 1575 aa17.21■□□□□ 0.35
NR1I3-227ENST00000510951 EHMT2Q96KQ7 1210 aa17.2■□□□□ 0.34
NR1I3-227ENST00000510951 ARHGEF11O15085 1522 aa17.2■□□□□ 0.34
NR1I3-227ENST00000510951 KIAA0586Q9BVV6 1533 aa17.2■□□□□ 0.34
NR1I3-227ENST00000510951 ERCC6L2Q5T890 1561 aa17.17■□□□□ 0.34
NR1I3-227ENST00000510951 GOLGA3Q08378 1498 aa17.16■□□□□ 0.34
NR1I3-227ENST00000510951 PRG4Q92954 1404 aaPredicted RBP17.11■□□□□ 0.33
NR1I3-227ENST00000510951 JPH4Q96JJ6 628 aa17.09■□□□□ 0.33
NR1I3-227ENST00000510951 UGGT2Q9NYU1 1516 aa17.07■□□□□ 0.32
NR1I3-227ENST00000510951 ARAP1Q96P48 1450 aa17.07■□□□□ 0.32
NR1I3-227ENST00000510951 KIAA0556O60303 1618 aa17.06■□□□□ 0.32
NR1I3-227ENST00000510951 UBTFP17480 764 aaKnown RBP17.05■□□□□ 0.32
NR1I3-227ENST00000510951 DISP1Q96F81 1524 aa17.03■□□□□ 0.32
NR1I3-227ENST00000510951 RANGAP1P46060 587 aaPredicted RBP17.02■□□□□ 0.32
NR1I3-227ENST00000510951 CARMIL2Q6F5E8 1435 aa17.01■□□□□ 0.31
NR1I3-227ENST00000510951 SAMD9Q5K651 1589 aa17■□□□□ 0.31
NR1I3-227ENST00000510951 TTBK1Q5TCY1 1321 aaPredicted RBP16.96■□□□□ 0.31
NR1I3-227ENST00000510951 CYB5RLQ6IPT4 315 aa16.96■□□□□ 0.31
NR1I3-227ENST00000510951 EFCAB5A4FU69 1503 aa16.94■□□□□ 0.3
NR1I3-227ENST00000510951 TNIKQ9UKE5 1360 aa16.93■□□□□ 0.3
NR1I3-227ENST00000510951 LOC105371045A0A1W2PR82 267 aa16.92■□□□□ 0.3
NR1I3-227ENST00000510951 P3H3Q8IVL6 736 aa16.92■□□□□ 0.3
NR1I3-227ENST00000510951 PTPRGP23470 1445 aa16.9■□□□□ 0.3
NR1I3-227ENST00000510951 FHOD3Q2V2M9 1422 aa16.9■□□□□ 0.3
NR1I3-227ENST00000510951 ADCY10Q96PN6 1610 aa16.89■□□□□ 0.29
NR1I3-227ENST00000510951 ARHGAP35Q9NRY4 1499 aa16.87■□□□□ 0.29
NR1I3-227ENST00000510951 CLIP1P30622 1438 aa16.84■□□□□ 0.29
NR1I3-227ENST00000510951 CEP162Q5TB80 1403 aa16.83■□□□□ 0.28
NR1I3-227ENST00000510951 PLB1Q6P1J6 1458 aa16.83■□□□□ 0.28
NR1I3-227ENST00000510951 ABCA8O94911 1581 aa16.82■□□□□ 0.28
NR1I3-227ENST00000510951 ABCC2Q92887 1545 aa16.82■□□□□ 0.28
NR1I3-227ENST00000510951 RAPGEF6Q8TEU7 1601 aa16.81■□□□□ 0.28
NR1I3-227ENST00000510951 UACAQ9BZF9 1416 aa16.8■□□□□ 0.28
NR1I3-227ENST00000510951 UHRF1BP1LA0JNW5 1464 aa16.78■□□□□ 0.28
NR1I3-227ENST00000510951 ZCCHC11Q5TAX3 1644 aaKnown RBP16.78■□□□□ 0.28
NR1I3-227ENST00000510951 PCF11O94913 1555 aaKnown RBP16.75■□□□□ 0.27
NR1I3-227ENST00000510951 FMN1Q68DA7 1419 aa16.73■□□□□ 0.27
NR1I3-227ENST00000510951 HECW1Q76N89 1606 aa16.72■□□□□ 0.27
NR1I3-227ENST00000510951 ARID3CA6NKF2 412 aa16.72■□□□□ 0.27
NR1I3-227ENST00000510951 LRRIQ1Q96JM4 1722 aa16.72■□□□□ 0.27
NR1I3-227ENST00000510951 KDM5BQ9UGL1 1544 aa16.7■□□□□ 0.26
NR1I3-227ENST00000510951 NUP153P49790 1475 aaKnown RBP16.7■□□□□ 0.26
NR1I3-227ENST00000510951 MAPKBP1O60336 1514 aa16.69■□□□□ 0.26
NR1I3-227ENST00000510951 NPM1P06748 294 aaKnown RBP eCLIP16.68■□□□□ 0.26
NR1I3-227ENST00000510951 CDK13Q14004 1512 aaKnown RBP16.66■□□□□ 0.26
NR1I3-227ENST00000510951 ATP1B4Q9UN42 357 aaPredicted RBP16.65■□□□□ 0.26
NR1I3-227ENST00000510951 KIF13AQ9H1H9 1805 aa16.65■□□□□ 0.26
NR1I3-227ENST00000510951 ATP10BO94823 1461 aa16.64■□□□□ 0.25
NR1I3-227ENST00000510951 FYCO1Q9BQS8 1478 aa16.64■□□□□ 0.25
NR1I3-227ENST00000510951 ASXL2Q76L83 1435 aa16.63■□□□□ 0.25
NR1I3-227ENST00000510951 CASKIN1Q8WXD9 1431 aa16.63■□□□□ 0.25
NR1I3-227ENST00000510951 EPRSP07814 1512 aaKnown RBP16.61■□□□□ 0.25
NR1I3-227ENST00000510951 DIP2BQ9P265 1576 aa16.61■□□□□ 0.25
NR1I3-227ENST00000510951 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.6■□□□□ 0.25
NR1I3-227ENST00000510951 HNRNPUL2Q1KMD3 747 aaKnown RBP16.6■□□□□ 0.25
NR1I3-227ENST00000510951 VPS8Q8N3P4 1428 aa16.6■□□□□ 0.25
NR1I3-227ENST00000510951 WDR7Q9Y4E6 1490 aa16.59■□□□□ 0.25
NR1I3-227ENST00000510951 CCDC18Q5T9S5 1454 aa16.57■□□□□ 0.24
NR1I3-227ENST00000510951 TRHP20396 242 aaPredicted RBP16.57■□□□□ 0.24
NR1I3-227ENST00000510951 CFAP43Q8NDM7 1665 aa16.56■□□□□ 0.24
NR1I3-227ENST00000510951 TSPOAP1O95153 1857 aa16.56■□□□□ 0.24
NR1I3-227ENST00000510951 ABCC10Q5T3U5 1492 aa16.55■□□□□ 0.24
NR1I3-227ENST00000510951 MAGI3Q5TCQ9 1506 aa16.5■□□□□ 0.23
NR1I3-227ENST00000510951 MAP3K4Q9Y6R4 1608 aa16.5■□□□□ 0.23
NR1I3-227ENST00000510951 FAM69CQ0P6D2 419 aa16.5■□□□□ 0.23
NR1I3-227ENST00000510951 GLI2P10070 1586 aa16.5■□□□□ 0.23
NR1I3-227ENST00000510951 KIF14Q15058 1648 aa16.49■□□□□ 0.23
NR1I3-227ENST00000510951 TIAM1Q13009 1591 aa16.49■□□□□ 0.23
NR1I3-227ENST00000510951 KCNH8Q96L42 1107 aa16.49■□□□□ 0.23
NR1I3-227ENST00000510951 TTC37Q6PGP7 1564 aa16.47■□□□□ 0.23
NR1I3-227ENST00000510951 PLEKHD1A6NEE1 506 aa16.47■□□□□ 0.23
NR1I3-227ENST00000510951 ABCA9Q8IUA7 1624 aa16.47■□□□□ 0.23
NR1I3-227ENST00000510951 PPRC1Q5VV67 1664 aaKnown RBP16.46■□□□□ 0.23
NR1I3-227ENST00000510951 TROQ12816 1431 aaPredicted RBP16.45■□□□□ 0.22
NR1I3-227ENST00000510951 CDK11AQ9UQ88 783 aaPredicted RBP16.44■□□□□ 0.22
NR1I3-227ENST00000510951 EHBP1L1Q8N3D4 1523 aa16.44■□□□□ 0.22
NR1I3-227ENST00000510951 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.44■□□□□ 0.22
NR1I3-227ENST00000510951 MYO5CQ9NQX4 1742 aa16.42■□□□□ 0.22
NR1I3-227ENST00000510951 MTUS2Q5JR59 1369 aa16.41■□□□□ 0.22
NR1I3-227ENST00000510951 MAP3K1Q13233 1512 aa16.4■□□□□ 0.22
NR1I3-227ENST00000510951 SUPT6HQ7KZ85 1726 aaKnown RBP16.39■□□□□ 0.21
NR1I3-227ENST00000510951 CD109Q6YHK3 1445 aa16.38■□□□□ 0.21
NR1I3-227ENST00000510951 CDC42BPAQ5VT25 1732 aa16.38■□□□□ 0.21
NR1I3-227ENST00000510951 LRRC9Q6ZRR7 1453 aa16.37■□□□□ 0.21
NR1I3-227ENST00000510951 APLP2Q06481 763 aa16.36■□□□□ 0.21
NR1I3-227ENST00000510951 PREX2Q70Z35 1606 aa16.36■□□□□ 0.21
NR1I3-227ENST00000510951 CDC42BPBQ9Y5S2 1711 aa16.35■□□□□ 0.21
NR1I3-227ENST00000510951 TEX14Q8IWB6 1497 aa16.34■□□□□ 0.21
NR1I3-227ENST00000510951 KANK4Q5T7N3 995 aaPredicted RBP16.33■□□□□ 0.2
NR1I3-227ENST00000510951 CFAP74Q9C0B2 1584 aa16.33■□□□□ 0.2
NR1I3-227ENST00000510951 ITSN2Q9NZM3 1697 aa16.33■□□□□ 0.2
NR1I3-227ENST00000510951 NCOA2Q15596 1464 aa16.31■□□□□ 0.2
NR1I3-227ENST00000510951 ARHGAP5Q13017 1502 aa16.3■□□□□ 0.2
NR1I3-227ENST00000510951 KDM6BO15054 1643 aa16.3■□□□□ 0.2
NR1I3-227ENST00000510951 FANCAO15360 1455 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms