RNA–Protein interactions for RNA: ENST00000510638.1

NFKB1-209, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 628 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-209ENST00000510638 PBRM1Q86U86 1689 aa14.17□□□□□ -0.14
NFKB1-209ENST00000510638 CHMP7Q8WUX9 453 aaPredicted RBP14.16□□□□□ -0.14
NFKB1-209ENST00000510638 KDM4FA0A1W2PPD8 638 aa14.15□□□□□ -0.14
NFKB1-209ENST00000510638 KDM6BO15054 1643 aa14.15□□□□□ -0.14
NFKB1-209ENST00000510638 CARMIL1Q5VZK9 1371 aa14.14□□□□□ -0.15
NFKB1-209ENST00000510638 FHAD1B1AJZ9 1412 aa14.12□□□□□ -0.15
NFKB1-209ENST00000510638 PRXQ9BXM0 1461 aa14.09□□□□□ -0.15
NFKB1-209ENST00000510638 RAPGEF2Q9Y4G8 1499 aa14.08□□□□□ -0.16
NFKB1-209ENST00000510638 HECW2Q9P2P5 1572 aa14.08□□□□□ -0.16
NFKB1-209ENST00000510638 CUL7Q14999 1698 aa14.07□□□□□ -0.16
NFKB1-209ENST00000510638 SHROOM2Q13796 1616 aa14.06□□□□□ -0.16
NFKB1-209ENST00000510638 GOLGA3Q08378 1498 aa14.05□□□□□ -0.16
NFKB1-209ENST00000510638 ADAMTS12P58397 1594 aa14.05□□□□□ -0.16
NFKB1-209ENST00000510638 CEP170Q5SW79 1584 aa14.05□□□□□ -0.16
NFKB1-209ENST00000510638 DIP2BQ9P265 1576 aa14.05□□□□□ -0.16
NFKB1-209ENST00000510638 TSPOAP1O95153 1857 aa14.04□□□□□ -0.16
NFKB1-209ENST00000510638 ABCC10Q5T3U5 1492 aa14.04□□□□□ -0.16
NFKB1-209ENST00000510638 UBTFP17480 764 aaKnown RBP14.03□□□□□ -0.16
NFKB1-209ENST00000510638 EHMT2Q96KQ7 1210 aa14.03□□□□□ -0.16
NFKB1-209ENST00000510638 KIF21BO75037 1637 aa14.02□□□□□ -0.16
NFKB1-209ENST00000510638 MAPKBP1O60336 1514 aa14.02□□□□□ -0.16
NFKB1-209ENST00000510638 GRIN2AQ12879 1464 aa14.01□□□□□ -0.17
NFKB1-209ENST00000510638 FBXO41Q8TF61 875 aa14□□□□□ -0.17
NFKB1-209ENST00000510638 LOC105371045A0A1W2PR82 267 aa13.98□□□□□ -0.17
NFKB1-209ENST00000510638 ADGRL1O94910 1474 aa13.97□□□□□ -0.17
NFKB1-209ENST00000510638 TNIKQ9UKE5 1360 aa13.94□□□□□ -0.18
NFKB1-209ENST00000510638 NUP160Q12769 1436 aa13.93□□□□□ -0.18
NFKB1-209ENST00000510638 FAM69CQ0P6D2 419 aa13.93□□□□□ -0.18
NFKB1-209ENST00000510638 KIAA0586Q9BVV6 1533 aa13.9□□□□□ -0.18
NFKB1-209ENST00000510638 LMTK3Q96Q04 1460 aa13.89□□□□□ -0.19
NFKB1-209ENST00000510638 RANGAP1P46060 587 aaPredicted RBP13.85□□□□□ -0.19
NFKB1-209ENST00000510638 ADCY10Q96PN6 1610 aa13.85□□□□□ -0.19
NFKB1-209ENST00000510638 NPM1P06748 294 aaKnown RBP eCLIP13.84□□□□□ -0.19
NFKB1-209ENST00000510638 JPH4Q96JJ6 628 aa13.84□□□□□ -0.19
NFKB1-209ENST00000510638 IQGAP2Q13576 1575 aa13.83□□□□□ -0.19
NFKB1-209ENST00000510638 PPRC1Q5VV67 1664 aaKnown RBP13.82□□□□□ -0.2
NFKB1-209ENST00000510638 CLIP1P30622 1438 aa13.81□□□□□ -0.2
NFKB1-209ENST00000510638 CEP162Q5TB80 1403 aa13.81□□□□□ -0.2
NFKB1-209ENST00000510638 CARMIL2Q6F5E8 1435 aa13.8□□□□□ -0.2
NFKB1-209ENST00000510638 CTTNBP2Q8WZ74 1663 aa13.79□□□□□ -0.2
NFKB1-209ENST00000510638 UGGT2Q9NYU1 1516 aa13.79□□□□□ -0.2
NFKB1-209ENST00000510638 FOXD1Q16676 465 aa13.78□□□□□ -0.2
NFKB1-209ENST00000510638 PRG4Q92954 1404 aaPredicted RBP13.78□□□□□ -0.2
NFKB1-209ENST00000510638 SOCS7O14512 581 aa13.77□□□□□ -0.21
NFKB1-209ENST00000510638 EFCAB5A4FU69 1503 aa13.75□□□□□ -0.21
NFKB1-209ENST00000510638 GLI2P10070 1586 aa13.75□□□□□ -0.21
NFKB1-209ENST00000510638 P3H3Q8IVL6 736 aa13.74□□□□□ -0.21
NFKB1-209ENST00000510638 ARHGAP35Q9NRY4 1499 aa13.73□□□□□ -0.21
NFKB1-209ENST00000510638 DISP1Q96F81 1524 aa13.7□□□□□ -0.22
NFKB1-209ENST00000510638 FHOD3Q2V2M9 1422 aa13.69□□□□□ -0.22
NFKB1-209ENST00000510638 SAMD9Q5K651 1589 aa13.69□□□□□ -0.22
NFKB1-209ENST00000510638 KIAA0556O60303 1618 aa13.68□□□□□ -0.22
NFKB1-209ENST00000510638 TTBK1Q5TCY1 1321 aaPredicted RBP13.68□□□□□ -0.22
NFKB1-209ENST00000510638 PTPRGP23470 1445 aa13.67□□□□□ -0.22
NFKB1-209ENST00000510638 FMN1Q68DA7 1419 aa13.67□□□□□ -0.22
NFKB1-209ENST00000510638 MAP3K4Q9Y6R4 1608 aa13.67□□□□□ -0.22
NFKB1-209ENST00000510638 TEX14Q8IWB6 1497 aa13.64□□□□□ -0.23
NFKB1-209ENST00000510638 VPS8Q8N3P4 1428 aa13.63□□□□□ -0.23
NFKB1-209ENST00000510638 PLB1Q6P1J6 1458 aa13.62□□□□□ -0.23
NFKB1-209ENST00000510638 ATP1B4Q9UN42 357 aaPredicted RBP13.61□□□□□ -0.23
NFKB1-209ENST00000510638 COL17A1Q9UMD9 1497 aaPredicted RBP13.6□□□□□ -0.23
NFKB1-209ENST00000510638 DISP3Q9P2K9 1392 aa13.59□□□□□ -0.23
NFKB1-209ENST00000510638 APLP2Q06481 763 aa13.59□□□□□ -0.23
NFKB1-209ENST00000510638 ILDR2Q71H61 639 aa13.59□□□□□ -0.23
NFKB1-209ENST00000510638 ABCC2Q92887 1545 aa13.58□□□□□ -0.24
NFKB1-209ENST00000510638 CASKIN1Q8WXD9 1431 aa13.57□□□□□ -0.24
NFKB1-209ENST00000510638 UACAQ9BZF9 1416 aa13.57□□□□□ -0.24
NFKB1-209ENST00000510638 SPATA31D1Q6ZQQ2 1576 aa13.57□□□□□ -0.24
NFKB1-209ENST00000510638 ASXL2Q76L83 1435 aa13.56□□□□□ -0.24
NFKB1-209ENST00000510638 FYCO1Q9BQS8 1478 aa13.55□□□□□ -0.24
NFKB1-209ENST00000510638 PCF11O94913 1555 aaKnown RBP13.54□□□□□ -0.24
NFKB1-209ENST00000510638 ADAMTSL3P82987 1691 aa13.53□□□□□ -0.24
NFKB1-209ENST00000510638 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.52□□□□□ -0.25
NFKB1-209ENST00000510638 HNRNPUL2Q1KMD3 747 aaKnown RBP13.52□□□□□ -0.25
NFKB1-209ENST00000510638 UHRF1BP1LA0JNW5 1464 aa13.52□□□□□ -0.25
NFKB1-209ENST00000510638 ABCA8O94911 1581 aa13.51□□□□□ -0.25
NFKB1-209ENST00000510638 HECW1Q76N89 1606 aa13.5□□□□□ -0.25
NFKB1-209ENST00000510638 RAPGEF6Q8TEU7 1601 aa13.5□□□□□ -0.25
NFKB1-209ENST00000510638 CCDC18Q5T9S5 1454 aa13.5□□□□□ -0.25
NFKB1-209ENST00000510638 CDK11AQ9UQ88 783 aaPredicted RBP13.5□□□□□ -0.25
NFKB1-209ENST00000510638 EPRSP07814 1512 aaKnown RBP13.49□□□□□ -0.25
NFKB1-209ENST00000510638 NUP153P49790 1475 aaKnown RBP13.49□□□□□ -0.25
NFKB1-209ENST00000510638 ARID3CA6NKF2 412 aa13.49□□□□□ -0.25
NFKB1-209ENST00000510638 CFAP43Q8NDM7 1665 aa13.48□□□□□ -0.25
NFKB1-209ENST00000510638 PTPRMP28827 1452 aa13.48□□□□□ -0.25
NFKB1-209ENST00000510638 MAP3K1Q13233 1512 aa13.44□□□□□ -0.26
NFKB1-209ENST00000510638 KDM5BQ9UGL1 1544 aa13.44□□□□□ -0.26
NFKB1-209ENST00000510638 ATP10BO94823 1461 aa13.44□□□□□ -0.26
NFKB1-209ENST00000510638 ZCCHC11Q5TAX3 1644 aaKnown RBP13.44□□□□□ -0.26
NFKB1-209ENST00000510638 PLEKHD1A6NEE1 506 aa13.44□□□□□ -0.26
NFKB1-209ENST00000510638 CERKQ8TCT0 537 aa13.43□□□□□ -0.26
NFKB1-209ENST00000510638 MTUS2Q5JR59 1369 aa13.43□□□□□ -0.26
NFKB1-209ENST00000510638 BCORL1Q5H9F3 1711 aa13.42□□□□□ -0.26
NFKB1-209ENST00000510638 CDK13Q14004 1512 aaKnown RBP13.42□□□□□ -0.26
NFKB1-209ENST00000510638 TIAM1Q13009 1591 aa13.41□□□□□ -0.26
NFKB1-209ENST00000510638 MAGI3Q5TCQ9 1506 aa13.4□□□□□ -0.26
NFKB1-209ENST00000510638 KANK4Q5T7N3 995 aaPredicted RBP13.38□□□□□ -0.27
NFKB1-209ENST00000510638 MADDQ8WXG6 1647 aa13.38□□□□□ -0.27
NFKB1-209ENST00000510638 LRRC9Q6ZRR7 1453 aa13.37□□□□□ -0.27
NFKB1-209ENST00000510638 TROQ12816 1431 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 231 ms