RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 JPH4Q96JJ6 628 aa39.54■■■■□ 3.92
SNF8-209ENST00000510558 PRG4Q92954 1404 aaPredicted RBP39.54■■■■□ 3.92
SNF8-209ENST00000510558 CARMIL1Q5VZK9 1371 aa39.48■■■■□ 3.91
SNF8-209ENST00000510558 KIAA0586Q9BVV6 1533 aa39.45■■■■□ 3.91
SNF8-209ENST00000510558 RAPGEF2Q9Y4G8 1499 aa39.19■■■■□ 3.86
SNF8-209ENST00000510558 IQGAP2Q13576 1575 aa39.18■■■■□ 3.86
SNF8-209ENST00000510558 ADCY10Q96PN6 1610 aa39.07■■■■□ 3.84
SNF8-209ENST00000510558 CARMIL2Q6F5E8 1435 aa39.05■■■■□ 3.84
SNF8-209ENST00000510558 PTPRGP23470 1445 aa38.97■■■■□ 3.83
SNF8-209ENST00000510558 KIF13AQ9H1H9 1805 aa38.96■■■■□ 3.83
SNF8-209ENST00000510558 TNIKQ9UKE5 1360 aa38.95■■■■□ 3.83
SNF8-209ENST00000510558 NPM1P06748 294 aaKnown RBP eCLIP38.95■■■■□ 3.83
SNF8-209ENST00000510558 DISP1Q96F81 1524 aa38.94■■■■□ 3.82
SNF8-209ENST00000510558 UGGT2Q9NYU1 1516 aa38.94■■■■□ 3.82
SNF8-209ENST00000510558 CTTNBP2Q8WZ74 1663 aa38.94■■■■□ 3.82
SNF8-209ENST00000510558 PRXQ9BXM0 1461 aa38.92■■■■□ 3.82
SNF8-209ENST00000510558 MAPKBP1O60336 1514 aa38.91■■■■□ 3.82
SNF8-209ENST00000510558 TTBK1Q5TCY1 1321 aaPredicted RBP38.89■■■■□ 3.82
SNF8-209ENST00000510558 KIAA0556O60303 1618 aa38.82■■■■□ 3.81
SNF8-209ENST00000510558 ABCC10Q5T3U5 1492 aa38.8■■■■□ 3.8
SNF8-209ENST00000510558 DIP2BQ9P265 1576 aa38.75■■■■□ 3.79
SNF8-209ENST00000510558 ABCC2Q92887 1545 aa38.73■■■■□ 3.79
SNF8-209ENST00000510558 UHRF1BP1LA0JNW5 1464 aa38.72■■■■□ 3.79
SNF8-209ENST00000510558 UACAQ9BZF9 1416 aa38.72■■■■□ 3.79
SNF8-209ENST00000510558 FAM69CQ0P6D2 419 aa38.71■■■■□ 3.79
SNF8-209ENST00000510558 CSRNP3Q8WYN3 585 aa38.7■■■■□ 3.79
SNF8-209ENST00000510558 EEA1Q15075 1411 aa38.66■■■■□ 3.78
SNF8-209ENST00000510558 GOLGA3Q08378 1498 aa38.65■■■■□ 3.78
SNF8-209ENST00000510558 ASXL2Q76L83 1435 aa38.55■■■■□ 3.76
SNF8-209ENST00000510558 KDM5BQ9UGL1 1544 aa38.54■■■■□ 3.76
SNF8-209ENST00000510558 PLB1Q6P1J6 1458 aa38.52■■■■□ 3.76
SNF8-209ENST00000510558 ZCCHC11Q5TAX3 1644 aaKnown RBP38.5■■■■□ 3.75
SNF8-209ENST00000510558 TSPOAP1O95153 1857 aa38.49■■■■□ 3.75
SNF8-209ENST00000510558 FAM9AQ8IZU1 332 aaPredicted RBP38.46■■■■□ 3.75
SNF8-209ENST00000510558 ABCA8O94911 1581 aa38.43■■■■□ 3.74
SNF8-209ENST00000510558 CHIC1Q5VXU3 224 aa38.41■■■■□ 3.74
SNF8-209ENST00000510558 GLI2P10070 1586 aa38.4■■■■□ 3.74
SNF8-209ENST00000510558 SAMD9Q5K651 1589 aa38.36■■■■□ 3.73
SNF8-209ENST00000510558 KIF21BO75037 1637 aa38.36■■■■□ 3.73
SNF8-209ENST00000510558 P3H3Q8IVL6 736 aa38.32■■■■□ 3.72
SNF8-209ENST00000510558 EPRSP07814 1512 aaKnown RBP38.32■■■■□ 3.72
SNF8-209ENST00000510558 KDM6BO15054 1643 aa38.29■■■■□ 3.72
SNF8-209ENST00000510558 PPRC1Q5VV67 1664 aaKnown RBP38.28■■■■□ 3.72
SNF8-209ENST00000510558 WDR7Q9Y4E6 1490 aa38.26■■■■□ 3.72
SNF8-209ENST00000510558 MAP3K4Q9Y6R4 1608 aa38.23■■■■□ 3.71
SNF8-209ENST00000510558 RANGAP1P46060 587 aaPredicted RBP38.16■■■■□ 3.7
SNF8-209ENST00000510558 RAPGEF6Q8TEU7 1601 aa38.12■■■■□ 3.69
SNF8-209ENST00000510558 FHOD3Q2V2M9 1422 aa38.09■■■■□ 3.69
SNF8-209ENST00000510558 ATP10BO94823 1461 aa38.08■■■■□ 3.69
SNF8-209ENST00000510558 EFCAB5A4FU69 1503 aa38.07■■■■□ 3.68
SNF8-209ENST00000510558 ARID3CA6NKF2 412 aa38.06■■■■□ 3.68
SNF8-209ENST00000510558 TEX14Q8IWB6 1497 aa38.06■■■■□ 3.68
SNF8-209ENST00000510558 CFAP43Q8NDM7 1665 aa38.04■■■■□ 3.68
SNF8-209ENST00000510558 KCNH8Q96L42 1107 aa38.03■■■■□ 3.68
SNF8-209ENST00000510558 EHMT2Q96KQ7 1210 aa38.02■■■■□ 3.68
SNF8-209ENST00000510558 AEBP2Q6ZN18 517 aaPredicted RBP38.01■■■■□ 3.68
SNF8-209ENST00000510558 UBTFP17480 764 aaKnown RBP37.98■■■■□ 3.67
SNF8-209ENST00000510558 CD109Q6YHK3 1445 aa37.95■■■■□ 3.67
SNF8-209ENST00000510558 NUP153P49790 1475 aaKnown RBP37.95■■■■□ 3.67
SNF8-209ENST00000510558 MAGI3Q5TCQ9 1506 aa37.92■■■■□ 3.66
SNF8-209ENST00000510558 COL17A1Q9UMD9 1497 aaPredicted RBP37.92■■■■□ 3.66
SNF8-209ENST00000510558 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.85■■■■□ 3.65
SNF8-209ENST00000510558 HNRNPUL2Q1KMD3 747 aaKnown RBP37.85■■■■□ 3.65
SNF8-209ENST00000510558 ABCA9Q8IUA7 1624 aa37.83■■■■□ 3.65
SNF8-209ENST00000510558 ARHGAP35Q9NRY4 1499 aa37.77■■■■□ 3.64
SNF8-209ENST00000510558 FMN1Q68DA7 1419 aa37.7■■■■□ 3.62
SNF8-209ENST00000510558 PLEKHD1A6NEE1 506 aa37.66■■■■□ 3.62
SNF8-209ENST00000510558 CDK13Q14004 1512 aaKnown RBP37.65■■■■□ 3.62
SNF8-209ENST00000510558 HECW1Q76N89 1606 aa37.63■■■■□ 3.61
SNF8-209ENST00000510558 KDM4FA0A1W2PPD8 638 aa37.62■■■■□ 3.61
SNF8-209ENST00000510558 ARAP3Q8WWN8 1544 aa37.61■■■■□ 3.61
SNF8-209ENST00000510558 PHLDB1Q86UU1 1377 aa37.56■■■■□ 3.6
SNF8-209ENST00000510558 NEO1Q92859 1461 aa37.55■■■■□ 3.6
SNF8-209ENST00000510558 ATP1B4Q9UN42 357 aaPredicted RBP37.54■■■■□ 3.6
SNF8-209ENST00000510558 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.53■■■■□ 3.6
SNF8-209ENST00000510558 TTC37Q6PGP7 1564 aa37.5■■■■□ 3.59
SNF8-209ENST00000510558 ADGRL1O94910 1474 aa37.49■■■■□ 3.59
SNF8-209ENST00000510558 LRRIQ1Q96JM4 1722 aa37.44■■■■□ 3.58
SNF8-209ENST00000510558 CFAP74Q9C0B2 1584 aa37.42■■■■□ 3.58
SNF8-209ENST00000510558 PCF11O94913 1555 aaKnown RBP37.39■■■■□ 3.58
SNF8-209ENST00000510558 FANCAO15360 1455 aa37.38■■■■□ 3.57
SNF8-209ENST00000510558 FRMPD1Q5SYB0 1578 aa37.38■■■■□ 3.57
SNF8-209ENST00000510558 RAPGEF3O95398 923 aa37.37■■■■□ 3.57
SNF8-209ENST00000510558 CDK11AQ9UQ88 783 aaPredicted RBP37.37■■■■□ 3.57
SNF8-209ENST00000510558 CLIP1P30622 1438 aa37.35■■■■□ 3.57
SNF8-209ENST00000510558 AKNAQ7Z591 1439 aa37.34■■■■□ 3.57
SNF8-209ENST00000510558 CASKIN1Q8WXD9 1431 aa37.34■■■■□ 3.57
SNF8-209ENST00000510558 TROQ12816 1431 aaPredicted RBP37.3■■■■□ 3.56
SNF8-209ENST00000510558 KIF14Q15058 1648 aa37.3■■■■□ 3.56
SNF8-209ENST00000510558 RICTORQ6R327 1708 aa37.29■■■■□ 3.56
SNF8-209ENST00000510558 DENND4BO75064 1496 aaPredicted RBP37.28■■■■□ 3.56
SNF8-209ENST00000510558 MYO5CQ9NQX4 1742 aa37.28■■■■□ 3.56
SNF8-209ENST00000510558 PLCH2O75038 1416 aa37.27■■■■□ 3.56
SNF8-209ENST00000510558 CCDC18Q5T9S5 1454 aa37.26■■■■□ 3.56
SNF8-209ENST00000510558 FYCO1Q9BQS8 1478 aa37.24■■■■□ 3.55
SNF8-209ENST00000510558 ARHGEF40Q8TER5 1519 aa37.15■■■■□ 3.54
SNF8-209ENST00000510558 ZMYM4Q5VZL5 1548 aa37.13■■■■□ 3.53
SNF8-209ENST00000510558 EFCAB2Q5VUJ9 269 aa37.11■■■■□ 3.53
SNF8-209ENST00000510558 SCAPERQ9BY12 1400 aa37.1■■■■□ 3.53
SNF8-209ENST00000510558 ARHGAP5Q13017 1502 aa37.08■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms