RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 CHIC1Q5VXU3 224 aa23.02■■□□□ 1.28
SNF8-206ENST00000509989 PRG4Q92954 1404 aaPredicted RBP23■■□□□ 1.27
SNF8-206ENST00000509989 JPH4Q96JJ6 628 aa23■■□□□ 1.27
SNF8-206ENST00000509989 KIAA0586Q9BVV6 1533 aa22.99■■□□□ 1.27
SNF8-206ENST00000509989 RAPGEF2Q9Y4G8 1499 aa22.98■■□□□ 1.27
SNF8-206ENST00000509989 PRXQ9BXM0 1461 aa22.92■■□□□ 1.26
SNF8-206ENST00000509989 FAM9AQ8IZU1 332 aaPredicted RBP22.9■■□□□ 1.26
SNF8-206ENST00000509989 IQGAP2Q13576 1575 aa22.89■■□□□ 1.26
SNF8-206ENST00000509989 CTTNBP2Q8WZ74 1663 aa22.87■■□□□ 1.25
SNF8-206ENST00000509989 CSRNP3Q8WYN3 585 aa22.84■■□□□ 1.25
SNF8-206ENST00000509989 DISP1Q96F81 1524 aa22.79■■□□□ 1.24
SNF8-206ENST00000509989 TTBK1Q5TCY1 1321 aaPredicted RBP22.77■■□□□ 1.24
SNF8-206ENST00000509989 UGGT2Q9NYU1 1516 aa22.76■■□□□ 1.23
SNF8-206ENST00000509989 EEA1Q15075 1411 aa22.75■■□□□ 1.23
SNF8-206ENST00000509989 ADCY10Q96PN6 1610 aa22.74■■□□□ 1.23
SNF8-206ENST00000509989 KIAA0556O60303 1618 aa22.71■■□□□ 1.23
SNF8-206ENST00000509989 EHMT2Q96KQ7 1210 aa22.69■■□□□ 1.22
SNF8-206ENST00000509989 PTPRGP23470 1445 aa22.67■■□□□ 1.22
SNF8-206ENST00000509989 CARMIL2Q6F5E8 1435 aa22.67■■□□□ 1.22
SNF8-206ENST00000509989 TRHP20396 242 aaPredicted RBP22.67■■□□□ 1.22
SNF8-206ENST00000509989 KIF21BO75037 1637 aa22.67■■□□□ 1.22
SNF8-206ENST00000509989 TNIKQ9UKE5 1360 aa22.66■■□□□ 1.22
SNF8-206ENST00000509989 KIF13AQ9H1H9 1805 aa22.59■■□□□ 1.21
SNF8-206ENST00000509989 P3H3Q8IVL6 736 aa22.58■■□□□ 1.21
SNF8-206ENST00000509989 RANGAP1P46060 587 aaPredicted RBP22.57■■□□□ 1.2
SNF8-206ENST00000509989 SAMD9Q5K651 1589 aa22.55■■□□□ 1.2
SNF8-206ENST00000509989 GOLGA3Q08378 1498 aa22.53■■□□□ 1.2
SNF8-206ENST00000509989 UACAQ9BZF9 1416 aa22.52■■□□□ 1.2
SNF8-206ENST00000509989 PLB1Q6P1J6 1458 aa22.52■■□□□ 1.2
SNF8-206ENST00000509989 ABCC2Q92887 1545 aa22.51■■□□□ 1.19
SNF8-206ENST00000509989 UHRF1BP1LA0JNW5 1464 aa22.49■■□□□ 1.19
SNF8-206ENST00000509989 MAPKBP1O60336 1514 aa22.49■■□□□ 1.19
SNF8-206ENST00000509989 ABCA8O94911 1581 aa22.47■■□□□ 1.19
SNF8-206ENST00000509989 ZCCHC11Q5TAX3 1644 aaKnown RBP22.46■■□□□ 1.19
SNF8-206ENST00000509989 NPM1P06748 294 aaKnown RBP eCLIP22.46■■□□□ 1.19
SNF8-206ENST00000509989 UBTFP17480 764 aaKnown RBP22.44■■□□□ 1.18
SNF8-206ENST00000509989 DIP2BQ9P265 1576 aa22.44■■□□□ 1.18
SNF8-206ENST00000509989 FHOD3Q2V2M9 1422 aa22.43■■□□□ 1.18
SNF8-206ENST00000509989 KDM5BQ9UGL1 1544 aa22.42■■□□□ 1.18
SNF8-206ENST00000509989 ABCC10Q5T3U5 1492 aa22.41■■□□□ 1.18
SNF8-206ENST00000509989 ASXL2Q76L83 1435 aa22.39■■□□□ 1.17
SNF8-206ENST00000509989 ARID3CA6NKF2 412 aa22.38■■□□□ 1.17
SNF8-206ENST00000509989 TSPOAP1O95153 1857 aa22.37■■□□□ 1.17
SNF8-206ENST00000509989 FAM69CQ0P6D2 419 aa22.37■■□□□ 1.17
SNF8-206ENST00000509989 RAPGEF6Q8TEU7 1601 aa22.34■■□□□ 1.17
SNF8-206ENST00000509989 EFCAB5A4FU69 1503 aa22.32■■□□□ 1.16
SNF8-206ENST00000509989 ARHGAP35Q9NRY4 1499 aa22.32■■□□□ 1.16
SNF8-206ENST00000509989 ATP10BO94823 1461 aa22.28■■□□□ 1.16
SNF8-206ENST00000509989 PPRC1Q5VV67 1664 aaKnown RBP22.27■■□□□ 1.16
SNF8-206ENST00000509989 NUP153P49790 1475 aaKnown RBP22.26■■□□□ 1.15
SNF8-206ENST00000509989 EPRSP07814 1512 aaKnown RBP22.26■■□□□ 1.15
SNF8-206ENST00000509989 GLI2P10070 1586 aa22.24■■□□□ 1.15
SNF8-206ENST00000509989 WDR7Q9Y4E6 1490 aa22.22■■□□□ 1.15
SNF8-206ENST00000509989 MAP3K4Q9Y6R4 1608 aa22.2■■□□□ 1.15
SNF8-206ENST00000509989 LRRIQ1Q96JM4 1722 aa22.2■■□□□ 1.14
SNF8-206ENST00000509989 KCNH8Q96L42 1107 aa22.18■■□□□ 1.14
SNF8-206ENST00000509989 LOC105371045A0A1W2PR82 267 aa22.16■■□□□ 1.14
SNF8-206ENST00000509989 CDK13Q14004 1512 aaKnown RBP22.16■■□□□ 1.14
SNF8-206ENST00000509989 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.11■■□□□ 1.13
SNF8-206ENST00000509989 HNRNPUL2Q1KMD3 747 aaKnown RBP22.11■■□□□ 1.13
SNF8-206ENST00000509989 CLIP1P30622 1438 aa22.1■■□□□ 1.13
SNF8-206ENST00000509989 CFAP43Q8NDM7 1665 aa22.09■■□□□ 1.13
SNF8-206ENST00000509989 PCF11O94913 1555 aaKnown RBP22.08■■□□□ 1.13
SNF8-206ENST00000509989 FMN1Q68DA7 1419 aa22.08■■□□□ 1.13
SNF8-206ENST00000509989 ATP1B4Q9UN42 357 aaPredicted RBP22.08■■□□□ 1.13
SNF8-206ENST00000509989 KDM6BO15054 1643 aa22.07■■□□□ 1.12
SNF8-206ENST00000509989 HECW1Q76N89 1606 aa22.06■■□□□ 1.12
SNF8-206ENST00000509989 COL17A1Q9UMD9 1497 aaPredicted RBP22.05■■□□□ 1.12
SNF8-206ENST00000509989 ABCA9Q8IUA7 1624 aa22.04■■□□□ 1.12
SNF8-206ENST00000509989 CD109Q6YHK3 1445 aa22.03■■□□□ 1.12
SNF8-206ENST00000509989 CEP162Q5TB80 1403 aa22.01■■□□□ 1.11
SNF8-206ENST00000509989 TTC37Q6PGP7 1564 aa21.98■■□□□ 1.11
SNF8-206ENST00000509989 CASKIN1Q8WXD9 1431 aa21.97■■□□□ 1.11
SNF8-206ENST00000509989 MAGI3Q5TCQ9 1506 aa21.97■■□□□ 1.11
SNF8-206ENST00000509989 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.96■■□□□ 1.11
SNF8-206ENST00000509989 PLEKHD1A6NEE1 506 aa21.96■■□□□ 1.11
SNF8-206ENST00000509989 KIF14Q15058 1648 aa21.95■■□□□ 1.1
SNF8-206ENST00000509989 TEX14Q8IWB6 1497 aa21.94■■□□□ 1.1
SNF8-206ENST00000509989 FYCO1Q9BQS8 1478 aa21.9■■□□□ 1.1
SNF8-206ENST00000509989 TROQ12816 1431 aaPredicted RBP21.85■■□□□ 1.09
SNF8-206ENST00000509989 CCDC18Q5T9S5 1454 aa21.83■■□□□ 1.09
SNF8-206ENST00000509989 MYO5CQ9NQX4 1742 aa21.81■■□□□ 1.08
SNF8-206ENST00000509989 ARAP3Q8WWN8 1544 aa21.8■■□□□ 1.08
SNF8-206ENST00000509989 FRMPD1Q5SYB0 1578 aa21.79■■□□□ 1.08
SNF8-206ENST00000509989 CDC42BPBQ9Y5S2 1711 aa21.78■■□□□ 1.08
SNF8-206ENST00000509989 NEO1Q92859 1461 aa21.77■■□□□ 1.08
SNF8-206ENST00000509989 CDK11AQ9UQ88 783 aaPredicted RBP21.77■■□□□ 1.08
SNF8-206ENST00000509989 FANCAO15360 1455 aa21.77■■□□□ 1.07
SNF8-206ENST00000509989 RAPGEF3O95398 923 aa21.76■■□□□ 1.07
SNF8-206ENST00000509989 PLCH2O75038 1416 aa21.75■■□□□ 1.07
SNF8-206ENST00000509989 CDC42BPAQ5VT25 1732 aa21.75■■□□□ 1.07
SNF8-206ENST00000509989 AKNAQ7Z591 1439 aa21.74■■□□□ 1.07
SNF8-206ENST00000509989 RICTORQ6R327 1708 aa21.74■■□□□ 1.07
SNF8-206ENST00000509989 VPS8Q8N3P4 1428 aa21.72■■□□□ 1.07
SNF8-206ENST00000509989 CFAP74Q9C0B2 1584 aa21.7■■□□□ 1.06
SNF8-206ENST00000509989 PREX2Q70Z35 1606 aa21.7■■□□□ 1.06
SNF8-206ENST00000509989 ARHGAP5Q13017 1502 aa21.67■■□□□ 1.06
SNF8-206ENST00000509989 PHLDB1Q86UU1 1377 aa21.67■■□□□ 1.06
SNF8-206ENST00000509989 TIAM1Q13009 1591 aa21.66■■□□□ 1.06
SNF8-206ENST00000509989 ADGRL1O94910 1474 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 171.6 ms