RNA–Protein interactions for RNA: ENST00000509751.1

HTT-207, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 723 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-207ENST00000509751 FAM9AQ8IZU1 332 aaPredicted RBP25.34■■□□□ 1.65
HTT-207ENST00000509751 ERCC6L2Q5T890 1561 aa25.31■■□□□ 1.64
HTT-207ENST00000509751 SHROOM2Q13796 1616 aa25.3■■□□□ 1.64
HTT-207ENST00000509751 KIAA0586Q9BVV6 1533 aa25.29■■□□□ 1.64
HTT-207ENST00000509751 JPH4Q96JJ6 628 aa25.29■■□□□ 1.64
HTT-207ENST00000509751 AEBP2Q6ZN18 517 aaPredicted RBP25.27■■□□□ 1.64
HTT-207ENST00000509751 CSRNP3Q8WYN3 585 aa25.27■■□□□ 1.64
HTT-207ENST00000509751 PRG4Q92954 1404 aaPredicted RBP25.27■■□□□ 1.64
HTT-207ENST00000509751 EEA1Q15075 1411 aa25.25■■□□□ 1.63
HTT-207ENST00000509751 PRXQ9BXM0 1461 aa25.25■■□□□ 1.63
HTT-207ENST00000509751 IQGAP2Q13576 1575 aa25.18■■□□□ 1.62
HTT-207ENST00000509751 CTTNBP2Q8WZ74 1663 aa25.08■■□□□ 1.61
HTT-207ENST00000509751 EHMT2Q96KQ7 1210 aa25.08■■□□□ 1.61
HTT-207ENST00000509751 TTBK1Q5TCY1 1321 aaPredicted RBP25.07■■□□□ 1.6
HTT-207ENST00000509751 CARMIL2Q6F5E8 1435 aa25.03■■□□□ 1.6
HTT-207ENST00000509751 UGGT2Q9NYU1 1516 aa25.02■■□□□ 1.6
HTT-207ENST00000509751 DISP1Q96F81 1524 aa25.01■■□□□ 1.59
HTT-207ENST00000509751 KIF21BO75037 1637 aa25.01■■□□□ 1.59
HTT-207ENST00000509751 TNIKQ9UKE5 1360 aa24.96■■□□□ 1.59
HTT-207ENST00000509751 PTPRGP23470 1445 aa24.95■■□□□ 1.59
HTT-207ENST00000509751 KIAA0556O60303 1618 aa24.94■■□□□ 1.58
HTT-207ENST00000509751 RANGAP1P46060 587 aaPredicted RBP24.94■■□□□ 1.58
HTT-207ENST00000509751 GOLGA3Q08378 1498 aa24.89■■□□□ 1.58
HTT-207ENST00000509751 UBTFP17480 764 aaKnown RBP24.89■■□□□ 1.58
HTT-207ENST00000509751 P3H3Q8IVL6 736 aa24.87■■□□□ 1.57
HTT-207ENST00000509751 TRHP20396 242 aaPredicted RBP24.86■■□□□ 1.57
HTT-207ENST00000509751 ADCY10Q96PN6 1610 aa24.85■■□□□ 1.57
HTT-207ENST00000509751 NPM1P06748 294 aaKnown RBP eCLIP24.79■■□□□ 1.56
HTT-207ENST00000509751 UACAQ9BZF9 1416 aa24.78■■□□□ 1.56
HTT-207ENST00000509751 SAMD9Q5K651 1589 aa24.76■■□□□ 1.55
HTT-207ENST00000509751 PLB1Q6P1J6 1458 aa24.73■■□□□ 1.55
HTT-207ENST00000509751 ABCC2Q92887 1545 aa24.72■■□□□ 1.55
HTT-207ENST00000509751 FHOD3Q2V2M9 1422 aa24.71■■□□□ 1.55
HTT-207ENST00000509751 UHRF1BP1LA0JNW5 1464 aa24.7■■□□□ 1.55
HTT-207ENST00000509751 EFCAB5A4FU69 1503 aa24.66■■□□□ 1.54
HTT-207ENST00000509751 ABCA8O94911 1581 aa24.65■■□□□ 1.54
HTT-207ENST00000509751 MAPKBP1O60336 1514 aa24.64■■□□□ 1.53
HTT-207ENST00000509751 ARID3CA6NKF2 412 aa24.62■■□□□ 1.53
HTT-207ENST00000509751 KDM5BQ9UGL1 1544 aa24.61■■□□□ 1.53
HTT-207ENST00000509751 ARHGAP35Q9NRY4 1499 aa24.59■■□□□ 1.53
HTT-207ENST00000509751 ZCCHC11Q5TAX3 1644 aaKnown RBP24.58■■□□□ 1.53
HTT-207ENST00000509751 ASXL2Q76L83 1435 aa24.58■■□□□ 1.53
HTT-207ENST00000509751 FAM69CQ0P6D2 419 aa24.56■■□□□ 1.52
HTT-207ENST00000509751 ABCC10Q5T3U5 1492 aa24.55■■□□□ 1.52
HTT-207ENST00000509751 RAPGEF6Q8TEU7 1601 aa24.54■■□□□ 1.52
HTT-207ENST00000509751 KIF13AQ9H1H9 1805 aa24.52■■□□□ 1.52
HTT-207ENST00000509751 DIP2BQ9P265 1576 aa24.52■■□□□ 1.52
HTT-207ENST00000509751 LOC105371045A0A1W2PR82 267 aa24.51■■□□□ 1.51
HTT-207ENST00000509751 CLIP1P30622 1438 aa24.48■■□□□ 1.51
HTT-207ENST00000509751 NUP153P49790 1475 aaKnown RBP24.47■■□□□ 1.51
HTT-207ENST00000509751 ATP10BO94823 1461 aa24.46■■□□□ 1.51
HTT-207ENST00000509751 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.46■■□□□ 1.51
HTT-207ENST00000509751 HNRNPUL2Q1KMD3 747 aaKnown RBP24.46■■□□□ 1.51
HTT-207ENST00000509751 WDR7Q9Y4E6 1490 aa24.45■■□□□ 1.5
HTT-207ENST00000509751 FMN1Q68DA7 1419 aa24.44■■□□□ 1.5
HTT-207ENST00000509751 ATP1B4Q9UN42 357 aaPredicted RBP24.44■■□□□ 1.5
HTT-207ENST00000509751 EPRSP07814 1512 aaKnown RBP24.41■■□□□ 1.5
HTT-207ENST00000509751 KCNH8Q96L42 1107 aa24.41■■□□□ 1.5
HTT-207ENST00000509751 CEP162Q5TB80 1403 aa24.38■■□□□ 1.49
HTT-207ENST00000509751 CDK13Q14004 1512 aaKnown RBP24.35■■□□□ 1.49
HTT-207ENST00000509751 TSPOAP1O95153 1857 aa24.35■■□□□ 1.49
HTT-207ENST00000509751 HECW1Q76N89 1606 aa24.35■■□□□ 1.49
HTT-207ENST00000509751 GLI2P10070 1586 aa24.34■■□□□ 1.49
HTT-207ENST00000509751 PCF11O94913 1555 aaKnown RBP24.32■■□□□ 1.48
HTT-207ENST00000509751 PLEKHD1A6NEE1 506 aa24.27■■□□□ 1.48
HTT-207ENST00000509751 CASKIN1Q8WXD9 1431 aa24.27■■□□□ 1.48
HTT-207ENST00000509751 MAP3K4Q9Y6R4 1608 aa24.25■■□□□ 1.47
HTT-207ENST00000509751 PPRC1Q5VV67 1664 aaKnown RBP24.23■■□□□ 1.47
HTT-207ENST00000509751 CD109Q6YHK3 1445 aa24.22■■□□□ 1.47
HTT-207ENST00000509751 FYCO1Q9BQS8 1478 aa24.21■■□□□ 1.47
HTT-207ENST00000509751 LRRIQ1Q96JM4 1722 aa24.21■■□□□ 1.47
HTT-207ENST00000509751 CFAP43Q8NDM7 1665 aa24.19■■□□□ 1.46
HTT-207ENST00000509751 CDK11AQ9UQ88 783 aaPredicted RBP24.16■■□□□ 1.46
HTT-207ENST00000509751 ABCA9Q8IUA7 1624 aa24.16■■□□□ 1.46
HTT-207ENST00000509751 CCDC18Q5T9S5 1454 aa24.15■■□□□ 1.46
HTT-207ENST00000509751 TEX14Q8IWB6 1497 aa24.15■■□□□ 1.46
HTT-207ENST00000509751 KDM6BO15054 1643 aa24.13■■□□□ 1.45
HTT-207ENST00000509751 MAGI3Q5TCQ9 1506 aa24.12■■□□□ 1.45
HTT-207ENST00000509751 TROQ12816 1431 aaPredicted RBP24.1■■□□□ 1.45
HTT-207ENST00000509751 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.1■■□□□ 1.45
HTT-207ENST00000509751 TTC37Q6PGP7 1564 aa24.09■■□□□ 1.45
HTT-207ENST00000509751 KIF14Q15058 1648 aa24.06■■□□□ 1.44
HTT-207ENST00000509751 VPS8Q8N3P4 1428 aa24.06■■□□□ 1.44
HTT-207ENST00000509751 COL17A1Q9UMD9 1497 aaPredicted RBP24.05■■□□□ 1.44
HTT-207ENST00000509751 MTUS2Q5JR59 1369 aa23.97■■□□□ 1.43
HTT-207ENST00000509751 FANCAO15360 1455 aa23.95■■□□□ 1.42
HTT-207ENST00000509751 NEO1Q92859 1461 aa23.95■■□□□ 1.42
HTT-207ENST00000509751 PLCH2O75038 1416 aa23.93■■□□□ 1.42
HTT-207ENST00000509751 MYO5CQ9NQX4 1742 aa23.93■■□□□ 1.42
HTT-207ENST00000509751 AKNAQ7Z591 1439 aa23.91■■□□□ 1.42
HTT-207ENST00000509751 PHLDB1Q86UU1 1377 aa23.91■■□□□ 1.42
HTT-207ENST00000509751 ARAP3Q8WWN8 1544 aa23.9■■□□□ 1.42
HTT-207ENST00000509751 TIAM1Q13009 1591 aa23.9■■□□□ 1.42
HTT-207ENST00000509751 RAPGEF3O95398 923 aa23.89■■□□□ 1.41
HTT-207ENST00000509751 CFAP74Q9C0B2 1584 aa23.89■■□□□ 1.41
HTT-207ENST00000509751 ARHGAP5Q13017 1502 aa23.89■■□□□ 1.41
HTT-207ENST00000509751 EHBP1L1Q8N3D4 1523 aa23.89■■□□□ 1.41
HTT-207ENST00000509751 EFCAB2Q5VUJ9 269 aa23.87■■□□□ 1.41
HTT-207ENST00000509751 ADGRL1O94910 1474 aa23.84■■□□□ 1.41
HTT-207ENST00000509751 PREX2Q70Z35 1606 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms