RNA–Protein interactions for RNA: ENST00000509558.1

ZFYVE16-204, Transcript of zinc finger FYVE-type containing 16, humanhuman

TSL 3

Gene ZFYVE16, Length 637 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE16-204ENST00000509558 VPS8Q8N3P4 1428 aa13.97□□□□□ -0.17
ZFYVE16-204ENST00000509558 SYNJ2O15056 1496 aa13.93□□□□□ -0.18
ZFYVE16-204ENST00000509558 GRIN2AQ12879 1464 aa13.93□□□□□ -0.18
ZFYVE16-204ENST00000509558 EFCAB5A4FU69 1503 aa13.93□□□□□ -0.18
ZFYVE16-204ENST00000509558 RANGAP1P46060 587 aaPredicted RBP13.92□□□□□ -0.18
ZFYVE16-204ENST00000509558 SAMD9Q5K651 1589 aa13.92□□□□□ -0.18
ZFYVE16-204ENST00000509558 IQGAP2Q13576 1575 aa13.9□□□□□ -0.18
ZFYVE16-204ENST00000509558 CEP170Q5SW79 1584 aa13.88□□□□□ -0.19
ZFYVE16-204ENST00000509558 NUP160Q12769 1436 aa13.86□□□□□ -0.19
ZFYVE16-204ENST00000509558 KIAA0586Q9BVV6 1533 aa13.85□□□□□ -0.19
ZFYVE16-204ENST00000509558 UGGT2Q9NYU1 1516 aa13.85□□□□□ -0.19
ZFYVE16-204ENST00000509558 FHOD3Q2V2M9 1422 aa13.84□□□□□ -0.19
ZFYVE16-204ENST00000509558 CHD1O14646 1710 aa13.84□□□□□ -0.19
ZFYVE16-204ENST00000509558 PCF11O94913 1555 aaKnown RBP13.82□□□□□ -0.2
ZFYVE16-204ENST00000509558 CHMP7Q8WUX9 453 aaPredicted RBP13.8□□□□□ -0.2
ZFYVE16-204ENST00000509558 KIAA0556O60303 1618 aa13.79□□□□□ -0.2
ZFYVE16-204ENST00000509558 PPARGC1BQ86YN6 1023 aaKnown RBP13.77□□□□□ -0.21
ZFYVE16-204ENST00000509558 DISP1Q96F81 1524 aa13.77□□□□□ -0.21
ZFYVE16-204ENST00000509558 CFAP43Q8NDM7 1665 aa13.76□□□□□ -0.21
ZFYVE16-204ENST00000509558 FYCO1Q9BQS8 1478 aa13.76□□□□□ -0.21
ZFYVE16-204ENST00000509558 P3H3Q8IVL6 736 aa13.76□□□□□ -0.21
ZFYVE16-204ENST00000509558 FMN1Q68DA7 1419 aa13.75□□□□□ -0.21
ZFYVE16-204ENST00000509558 TRIM26Q12899 539 aaPredicted RBP13.75□□□□□ -0.21
ZFYVE16-204ENST00000509558 TIAM1Q13009 1591 aa13.75□□□□□ -0.21
ZFYVE16-204ENST00000509558 MAP3K1Q13233 1512 aa13.74□□□□□ -0.21
ZFYVE16-204ENST00000509558 CASKIN1Q8WXD9 1431 aa13.74□□□□□ -0.21
ZFYVE16-204ENST00000509558 FBLN2P98095 1184 aa13.74□□□□□ -0.21
ZFYVE16-204ENST00000509558 PCGF6Q9BYE7 350 aa13.73□□□□□ -0.21
ZFYVE16-204ENST00000509558 LRRIQ1Q96JM4 1722 aa13.72□□□□□ -0.21
ZFYVE16-204ENST00000509558 SHROOM2Q13796 1616 aa13.7□□□□□ -0.22
ZFYVE16-204ENST00000509558 CLASP1Q7Z460 1538 aa13.69□□□□□ -0.22
ZFYVE16-204ENST00000509558 APLP2Q06481 763 aa13.68□□□□□ -0.22
ZFYVE16-204ENST00000509558 HECW1Q76N89 1606 aa13.67□□□□□ -0.22
ZFYVE16-204ENST00000509558 TTBK1Q5TCY1 1321 aaPredicted RBP13.66□□□□□ -0.22
ZFYVE16-204ENST00000509558 KANK4Q5T7N3 995 aaPredicted RBP13.66□□□□□ -0.22
ZFYVE16-204ENST00000509558 JPH4Q96JJ6 628 aa13.65□□□□□ -0.22
ZFYVE16-204ENST00000509558 LRRC9Q6ZRR7 1453 aa13.65□□□□□ -0.22
ZFYVE16-204ENST00000509558 RAPGEF6Q8TEU7 1601 aa13.63□□□□□ -0.23
ZFYVE16-204ENST00000509558 CARMIL2Q6F5E8 1435 aa13.63□□□□□ -0.23
ZFYVE16-204ENST00000509558 CCDC18Q5T9S5 1454 aa13.61□□□□□ -0.23
ZFYVE16-204ENST00000509558 PRG4Q92954 1404 aaPredicted RBP13.61□□□□□ -0.23
ZFYVE16-204ENST00000509558 EPRSP07814 1512 aaKnown RBP13.59□□□□□ -0.23
ZFYVE16-204ENST00000509558 ABCA8O94911 1581 aa13.59□□□□□ -0.23
ZFYVE16-204ENST00000509558 ERCC6L2Q5T890 1561 aa13.59□□□□□ -0.23
ZFYVE16-204ENST00000509558 NUP153P49790 1475 aaKnown RBP13.59□□□□□ -0.23
ZFYVE16-204ENST00000509558 CDK13Q14004 1512 aaKnown RBP13.58□□□□□ -0.24
ZFYVE16-204ENST00000509558 MAGI3Q5TCQ9 1506 aa13.58□□□□□ -0.24
ZFYVE16-204ENST00000509558 PLB1Q6P1J6 1458 aa13.57□□□□□ -0.24
ZFYVE16-204ENST00000509558 EHBP1L1Q8N3D4 1523 aa13.57□□□□□ -0.24
ZFYVE16-204ENST00000509558 ATP1B4Q9UN42 357 aaPredicted RBP13.56□□□□□ -0.24
ZFYVE16-204ENST00000509558 RRBP1Q9P2E9 1410 aaKnown RBP13.56□□□□□ -0.24
ZFYVE16-204ENST00000509558 ARHGEF11O15085 1522 aa13.53□□□□□ -0.24
ZFYVE16-204ENST00000509558 PHLDB1Q86UU1 1377 aa13.52□□□□□ -0.25
ZFYVE16-204ENST00000509558 SUPT6HQ7KZ85 1726 aaKnown RBP13.52□□□□□ -0.25
ZFYVE16-204ENST00000509558 PTPRGP23470 1445 aa13.5□□□□□ -0.25
ZFYVE16-204ENST00000509558 MTUS2Q5JR59 1369 aa13.5□□□□□ -0.25
ZFYVE16-204ENST00000509558 NCOA2Q15596 1464 aa13.48□□□□□ -0.25
ZFYVE16-204ENST00000509558 CCNB3Q8WWL7 1395 aa13.46□□□□□ -0.25
ZFYVE16-204ENST00000509558 UACAQ9BZF9 1416 aa13.46□□□□□ -0.26
ZFYVE16-204ENST00000509558 ADCY10Q96PN6 1610 aa13.46□□□□□ -0.26
ZFYVE16-204ENST00000509558 ABCC2Q92887 1545 aa13.45□□□□□ -0.26
ZFYVE16-204ENST00000509558 ATP10BO94823 1461 aa13.45□□□□□ -0.26
ZFYVE16-204ENST00000509558 ARID3CA6NKF2 412 aa13.45□□□□□ -0.26
ZFYVE16-204ENST00000509558 TROQ12816 1431 aaPredicted RBP13.43□□□□□ -0.26
ZFYVE16-204ENST00000509558 FGD6Q6ZV73 1430 aa13.43□□□□□ -0.26
ZFYVE16-204ENST00000509558 MYOM3Q5VTT5 1437 aa13.42□□□□□ -0.26
ZFYVE16-204ENST00000509558 UHRF1BP1LA0JNW5 1464 aa13.42□□□□□ -0.26
ZFYVE16-204ENST00000509558 OSCARQ8IYS5 282 aa13.41□□□□□ -0.26
ZFYVE16-204ENST00000509558 KIF14Q15058 1648 aa13.41□□□□□ -0.26
ZFYVE16-204ENST00000509558 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.39□□□□□ -0.27
ZFYVE16-204ENST00000509558 TCOF1Q13428 1488 aaKnown RBP13.38□□□□□ -0.27
ZFYVE16-204ENST00000509558 PTPN23Q9H3S7 1636 aa13.38□□□□□ -0.27
ZFYVE16-204ENST00000509558 HNRNPUL2Q1KMD3 747 aaKnown RBP13.37□□□□□ -0.27
ZFYVE16-204ENST00000509558 ZCCHC11Q5TAX3 1644 aaKnown RBP13.37□□□□□ -0.27
ZFYVE16-204ENST00000509558 KDM5BQ9UGL1 1544 aa13.37□□□□□ -0.27
ZFYVE16-204ENST00000509558 CDK11AQ9UQ88 783 aaPredicted RBP13.36□□□□□ -0.27
ZFYVE16-204ENST00000509558 ABCC10Q5T3U5 1492 aa13.36□□□□□ -0.27
ZFYVE16-204ENST00000509558 ITSN2Q9NZM3 1697 aa13.35□□□□□ -0.27
ZFYVE16-204ENST00000509558 MIA2Q96PC5 1412 aa13.35□□□□□ -0.27
ZFYVE16-204ENST00000509558 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.34□□□□□ -0.27
ZFYVE16-204ENST00000509558 HRCP23327 699 aa13.34□□□□□ -0.27
ZFYVE16-204ENST00000509558 SENP3Q9H4L4 574 aaPredicted RBP13.32□□□□□ -0.28
ZFYVE16-204ENST00000509558 CDC42BPAQ5VT25 1732 aa13.32□□□□□ -0.28
ZFYVE16-204ENST00000509558 GPATCH8Q9UKJ3 1502 aaKnown RBP13.31□□□□□ -0.28
ZFYVE16-204ENST00000509558 FAM50AQ14320 339 aaKnown RBP13.3□□□□□ -0.28
ZFYVE16-204ENST00000509558 PLEKHD1A6NEE1 506 aa13.29□□□□□ -0.28
ZFYVE16-204ENST00000509558 PTPRKQ15262 1439 aa13.29□□□□□ -0.28
ZFYVE16-204ENST00000509558 TTC37Q6PGP7 1564 aa13.28□□□□□ -0.28
ZFYVE16-204ENST00000509558 PREX2Q70Z35 1606 aa13.28□□□□□ -0.28
ZFYVE16-204ENST00000509558 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.27□□□□□ -0.29
ZFYVE16-204ENST00000509558 DNMT1P26358 1616 aaKnown RBP13.26□□□□□ -0.29
ZFYVE16-204ENST00000509558 ITGAEP38570 1179 aa13.26□□□□□ -0.29
ZFYVE16-204ENST00000509558 CAMSAP2Q08AD1 1489 aa13.26□□□□□ -0.29
ZFYVE16-204ENST00000509558 RIMBP3CA6NJZ7 1639 aa13.25□□□□□ -0.29
ZFYVE16-204ENST00000509558 RIMBP3BA6NNM3 1639 aa13.25□□□□□ -0.29
ZFYVE16-204ENST00000509558 RIMBP3Q9UFD9 1639 aa13.25□□□□□ -0.29
ZFYVE16-204ENST00000509558 CDC42BPBQ9Y5S2 1711 aa13.25□□□□□ -0.29
ZFYVE16-204ENST00000509558 WDR7Q9Y4E6 1490 aa13.23□□□□□ -0.29
ZFYVE16-204ENST00000509558 MYO5CQ9NQX4 1742 aa13.22□□□□□ -0.29
ZFYVE16-204ENST00000509558 CROCC2H7BZ55 1655 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms