RNA–Protein interactions for RNA: ENST00000509420.5

SDHA-210, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 580 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-210ENST00000509420 TRHP20396 242 aaPredicted RBP23.35■■□□□ 1.33
SDHA-210ENST00000509420 JPH4Q96JJ6 628 aa23.33■■□□□ 1.33
SDHA-210ENST00000509420 KIAA0586Q9BVV6 1533 aa23.32■■□□□ 1.32
SDHA-210ENST00000509420 CARMIL1Q5VZK9 1371 aa23.26■■□□□ 1.31
SDHA-210ENST00000509420 ADCY10Q96PN6 1610 aa23.2■■□□□ 1.3
SDHA-210ENST00000509420 KIF13AQ9H1H9 1805 aa23.19■■□□□ 1.3
SDHA-210ENST00000509420 IQGAP2Q13576 1575 aa23.13■■□□□ 1.29
SDHA-210ENST00000509420 MAPKBP1O60336 1514 aa23.09■■□□□ 1.29
SDHA-210ENST00000509420 RAPGEF2Q9Y4G8 1499 aa23.08■■□□□ 1.29
SDHA-210ENST00000509420 DISP1Q96F81 1524 aa23.08■■□□□ 1.28
SDHA-210ENST00000509420 DIP2BQ9P265 1576 aa23.03■■□□□ 1.28
SDHA-210ENST00000509420 ABCC10Q5T3U5 1492 aa23.03■■□□□ 1.28
SDHA-210ENST00000509420 UGGT2Q9NYU1 1516 aa23.03■■□□□ 1.28
SDHA-210ENST00000509420 PTPRGP23470 1445 aa22.99■■□□□ 1.27
SDHA-210ENST00000509420 TNIKQ9UKE5 1360 aa22.99■■□□□ 1.27
SDHA-210ENST00000509420 PRXQ9BXM0 1461 aa22.98■■□□□ 1.27
SDHA-210ENST00000509420 CARMIL2Q6F5E8 1435 aa22.96■■□□□ 1.27
SDHA-210ENST00000509420 KIAA0556O60303 1618 aa22.96■■□□□ 1.27
SDHA-210ENST00000509420 CTTNBP2Q8WZ74 1663 aa22.95■■□□□ 1.26
SDHA-210ENST00000509420 ABCC2Q92887 1545 aa22.93■■□□□ 1.26
SDHA-210ENST00000509420 UHRF1BP1LA0JNW5 1464 aa22.93■■□□□ 1.26
SDHA-210ENST00000509420 FAM69CQ0P6D2 419 aa22.87■■□□□ 1.25
SDHA-210ENST00000509420 UACAQ9BZF9 1416 aa22.87■■□□□ 1.25
SDHA-210ENST00000509420 NPM1P06748 294 aaKnown RBP eCLIP22.85■■□□□ 1.25
SDHA-210ENST00000509420 KDM5BQ9UGL1 1544 aa22.84■■□□□ 1.25
SDHA-210ENST00000509420 TTBK1Q5TCY1 1321 aaPredicted RBP22.83■■□□□ 1.25
SDHA-210ENST00000509420 ASXL2Q76L83 1435 aa22.82■■□□□ 1.24
SDHA-210ENST00000509420 PPRC1Q5VV67 1664 aaKnown RBP22.81■■□□□ 1.24
SDHA-210ENST00000509420 ZCCHC11Q5TAX3 1644 aaKnown RBP22.79■■□□□ 1.24
SDHA-210ENST00000509420 GLI2P10070 1586 aa22.79■■□□□ 1.24
SDHA-210ENST00000509420 TSPOAP1O95153 1857 aa22.77■■□□□ 1.24
SDHA-210ENST00000509420 PLB1Q6P1J6 1458 aa22.76■■□□□ 1.23
SDHA-210ENST00000509420 ABCA8O94911 1581 aa22.76■■□□□ 1.23
SDHA-210ENST00000509420 GOLGA3Q08378 1498 aa22.72■■□□□ 1.23
SDHA-210ENST00000509420 EPRSP07814 1512 aaKnown RBP22.71■■□□□ 1.23
SDHA-210ENST00000509420 MAP3K4Q9Y6R4 1608 aa22.7■■□□□ 1.22
SDHA-210ENST00000509420 SAMD9Q5K651 1589 aa22.69■■□□□ 1.22
SDHA-210ENST00000509420 CSRNP3Q8WYN3 585 aa22.69■■□□□ 1.22
SDHA-210ENST00000509420 KDM6BO15054 1643 aa22.68■■□□□ 1.22
SDHA-210ENST00000509420 EEA1Q15075 1411 aa22.65■■□□□ 1.22
SDHA-210ENST00000509420 WDR7Q9Y4E6 1490 aa22.62■■□□□ 1.21
SDHA-210ENST00000509420 COL17A1Q9UMD9 1497 aaPredicted RBP22.6■■□□□ 1.21
SDHA-210ENST00000509420 KIF21BO75037 1637 aa22.57■■□□□ 1.2
SDHA-210ENST00000509420 ATP10BO94823 1461 aa22.53■■□□□ 1.2
SDHA-210ENST00000509420 P3H3Q8IVL6 736 aa22.52■■□□□ 1.2
SDHA-210ENST00000509420 CHIC1Q5VXU3 224 aa22.5■■□□□ 1.19
SDHA-210ENST00000509420 CFAP43Q8NDM7 1665 aa22.49■■□□□ 1.19
SDHA-210ENST00000509420 RAPGEF6Q8TEU7 1601 aa22.49■■□□□ 1.19
SDHA-210ENST00000509420 FAM9AQ8IZU1 332 aaPredicted RBP22.48■■□□□ 1.19
SDHA-210ENST00000509420 FHOD3Q2V2M9 1422 aa22.46■■□□□ 1.19
SDHA-210ENST00000509420 NUP153P49790 1475 aaKnown RBP22.46■■□□□ 1.19
SDHA-210ENST00000509420 TEX14Q8IWB6 1497 aa22.46■■□□□ 1.19
SDHA-210ENST00000509420 MAGI3Q5TCQ9 1506 aa22.46■■□□□ 1.19
SDHA-210ENST00000509420 AEBP2Q6ZN18 517 aaPredicted RBP22.44■■□□□ 1.18
SDHA-210ENST00000509420 KDM4FA0A1W2PPD8 638 aa22.43■■□□□ 1.18
SDHA-210ENST00000509420 CD109Q6YHK3 1445 aa22.41■■□□□ 1.18
SDHA-210ENST00000509420 ARID3CA6NKF2 412 aa22.4■■□□□ 1.18
SDHA-210ENST00000509420 EFCAB5A4FU69 1503 aa22.4■■□□□ 1.18
SDHA-210ENST00000509420 ABCA9Q8IUA7 1624 aa22.39■■□□□ 1.18
SDHA-210ENST00000509420 KCNH8Q96L42 1107 aa22.38■■□□□ 1.17
SDHA-210ENST00000509420 RANGAP1P46060 587 aaPredicted RBP22.33■■□□□ 1.17
SDHA-210ENST00000509420 ARAP3Q8WWN8 1544 aa22.29■■□□□ 1.16
SDHA-210ENST00000509420 ARHGAP35Q9NRY4 1499 aa22.28■■□□□ 1.16
SDHA-210ENST00000509420 ADGRL1O94910 1474 aa22.28■■□□□ 1.16
SDHA-210ENST00000509420 CDK13Q14004 1512 aaKnown RBP22.24■■□□□ 1.15
SDHA-210ENST00000509420 FRMPD1Q5SYB0 1578 aa22.23■■□□□ 1.15
SDHA-210ENST00000509420 EHMT2Q96KQ7 1210 aa22.22■■□□□ 1.15
SDHA-210ENST00000509420 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.21■■□□□ 1.15
SDHA-210ENST00000509420 TTC37Q6PGP7 1564 aa22.21■■□□□ 1.15
SDHA-210ENST00000509420 NEO1Q92859 1461 aa22.19■■□□□ 1.14
SDHA-210ENST00000509420 LRRIQ1Q96JM4 1722 aa22.19■■□□□ 1.14
SDHA-210ENST00000509420 UBTFP17480 764 aaKnown RBP22.16■■□□□ 1.14
SDHA-210ENST00000509420 HECW1Q76N89 1606 aa22.13■■□□□ 1.13
SDHA-210ENST00000509420 PHLDB1Q86UU1 1377 aa22.13■■□□□ 1.13
SDHA-210ENST00000509420 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.13■■□□□ 1.13
SDHA-210ENST00000509420 HNRNPUL2Q1KMD3 747 aaKnown RBP22.13■■□□□ 1.13
SDHA-210ENST00000509420 FMN1Q68DA7 1419 aa22.13■■□□□ 1.13
SDHA-210ENST00000509420 RICTORQ6R327 1708 aa22.11■■□□□ 1.13
SDHA-210ENST00000509420 RAPGEF3O95398 923 aa22.1■■□□□ 1.13
SDHA-210ENST00000509420 PLEKHD1A6NEE1 506 aa22.09■■□□□ 1.13
SDHA-210ENST00000509420 KIF14Q15058 1648 aa22.06■■□□□ 1.12
SDHA-210ENST00000509420 FANCAO15360 1455 aa22.05■■□□□ 1.12
SDHA-210ENST00000509420 AKNAQ7Z591 1439 aa22.05■■□□□ 1.12
SDHA-210ENST00000509420 PCF11O94913 1555 aaKnown RBP22.04■■□□□ 1.12
SDHA-210ENST00000509420 CFAP74Q9C0B2 1584 aa22.04■■□□□ 1.12
SDHA-210ENST00000509420 ARHGEF40Q8TER5 1519 aa22.02■■□□□ 1.12
SDHA-210ENST00000509420 ADAMTSL3P82987 1691 aa22.02■■□□□ 1.12
SDHA-210ENST00000509420 SIGLEC1Q9BZZ2 1709 aa22.02■■□□□ 1.12
SDHA-210ENST00000509420 ZMYM4Q5VZL5 1548 aa22.01■■□□□ 1.11
SDHA-210ENST00000509420 PLCH2O75038 1416 aa22■■□□□ 1.11
SDHA-210ENST00000509420 DENND4BO75064 1496 aaPredicted RBP21.99■■□□□ 1.11
SDHA-210ENST00000509420 CASKIN1Q8WXD9 1431 aa21.98■■□□□ 1.11
SDHA-210ENST00000509420 TROQ12816 1431 aaPredicted RBP21.97■■□□□ 1.11
SDHA-210ENST00000509420 MYO5CQ9NQX4 1742 aa21.97■■□□□ 1.11
SDHA-210ENST00000509420 BCORL1Q5H9F3 1711 aa21.96■■□□□ 1.11
SDHA-210ENST00000509420 HECW2Q9P2P5 1572 aa21.94■■□□□ 1.1
SDHA-210ENST00000509420 POGZQ7Z3K3 1410 aa21.93■■□□□ 1.1
SDHA-210ENST00000509420 YEATS2Q9ULM3 1422 aa21.93■■□□□ 1.1
SDHA-210ENST00000509420 CDC42BPBQ9Y5S2 1711 aa21.91■■□□□ 1.1
SDHA-210ENST00000509420 FYCO1Q9BQS8 1478 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms