RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 IGF1RP08069 1367 aa19.05■□□□□ 0.64
RNF4-212ENST00000509258 KIF27Q86VH2 1401 aa19.03■□□□□ 0.64
RNF4-212ENST00000509258 CUL7Q14999 1698 aa19.03■□□□□ 0.64
RNF4-212ENST00000509258 KIAA0586Q9BVV6 1533 aa19■□□□□ 0.63
RNF4-212ENST00000509258 KIF13AQ9H1H9 1805 aa18.99■□□□□ 0.63
RNF4-212ENST00000509258 MAPKBP1O60336 1514 aa18.96■□□□□ 0.63
RNF4-212ENST00000509258 NPM1P06748 294 aaKnown RBP eCLIP18.94■□□□□ 0.62
RNF4-212ENST00000509258 ABCC10Q5T3U5 1492 aa18.94■□□□□ 0.62
RNF4-212ENST00000509258 ADCY10Q96PN6 1610 aa18.93■□□□□ 0.62
RNF4-212ENST00000509258 CARMIL1Q5VZK9 1371 aa18.9■□□□□ 0.62
RNF4-212ENST00000509258 DIP2BQ9P265 1576 aa18.89■□□□□ 0.62
RNF4-212ENST00000509258 FAM69CQ0P6D2 419 aa18.89■□□□□ 0.61
RNF4-212ENST00000509258 PTPRGP23470 1445 aa18.83■□□□□ 0.6
RNF4-212ENST00000509258 CARMIL2Q6F5E8 1435 aa18.83■□□□□ 0.6
RNF4-212ENST00000509258 IQGAP2Q13576 1575 aa18.81■□□□□ 0.6
RNF4-212ENST00000509258 TNIKQ9UKE5 1360 aa18.8■□□□□ 0.6
RNF4-212ENST00000509258 ABCC2Q92887 1545 aa18.76■□□□□ 0.59
RNF4-212ENST00000509258 KDM6BO15054 1643 aa18.75■□□□□ 0.59
RNF4-212ENST00000509258 RAPGEF2Q9Y4G8 1499 aa18.75■□□□□ 0.59
RNF4-212ENST00000509258 DISP1Q96F81 1524 aa18.73■□□□□ 0.59
RNF4-212ENST00000509258 TTBK1Q5TCY1 1321 aaPredicted RBP18.73■□□□□ 0.59
RNF4-212ENST00000509258 CTTNBP2Q8WZ74 1663 aa18.73■□□□□ 0.59
RNF4-212ENST00000509258 UHRF1BP1LA0JNW5 1464 aa18.71■□□□□ 0.59
RNF4-212ENST00000509258 PLB1Q6P1J6 1458 aa18.7■□□□□ 0.58
RNF4-212ENST00000509258 TSPOAP1O95153 1857 aa18.69■□□□□ 0.58
RNF4-212ENST00000509258 ASXL2Q76L83 1435 aa18.69■□□□□ 0.58
RNF4-212ENST00000509258 UACAQ9BZF9 1416 aa18.69■□□□□ 0.58
RNF4-212ENST00000509258 UGGT2Q9NYU1 1516 aa18.69■□□□□ 0.58
RNF4-212ENST00000509258 GLI2P10070 1586 aa18.66■□□□□ 0.58
RNF4-212ENST00000509258 KIAA0556O60303 1618 aa18.66■□□□□ 0.58
RNF4-212ENST00000509258 PRXQ9BXM0 1461 aa18.65■□□□□ 0.58
RNF4-212ENST00000509258 KDM5BQ9UGL1 1544 aa18.63■□□□□ 0.57
RNF4-212ENST00000509258 PPRC1Q5VV67 1664 aaKnown RBP18.59■□□□□ 0.57
RNF4-212ENST00000509258 EPRSP07814 1512 aaKnown RBP18.58■□□□□ 0.56
RNF4-212ENST00000509258 ZCCHC11Q5TAX3 1644 aaKnown RBP18.57■□□□□ 0.56
RNF4-212ENST00000509258 KDM4FA0A1W2PPD8 638 aa18.55■□□□□ 0.56
RNF4-212ENST00000509258 MAP3K4Q9Y6R4 1608 aa18.55■□□□□ 0.56
RNF4-212ENST00000509258 GOLGA3Q08378 1498 aa18.54■□□□□ 0.56
RNF4-212ENST00000509258 TEX14Q8IWB6 1497 aa18.54■□□□□ 0.56
RNF4-212ENST00000509258 WDR7Q9Y4E6 1490 aa18.52■□□□□ 0.56
RNF4-212ENST00000509258 ABCA8O94911 1581 aa18.48■□□□□ 0.55
RNF4-212ENST00000509258 COL17A1Q9UMD9 1497 aaPredicted RBP18.47■□□□□ 0.55
RNF4-212ENST00000509258 CSRNP3Q8WYN3 585 aa18.47■□□□□ 0.55
RNF4-212ENST00000509258 SAMD9Q5K651 1589 aa18.44■□□□□ 0.54
RNF4-212ENST00000509258 ADGRL1O94910 1474 aa18.44■□□□□ 0.54
RNF4-212ENST00000509258 CFAP43Q8NDM7 1665 aa18.41■□□□□ 0.54
RNF4-212ENST00000509258 MAGI3Q5TCQ9 1506 aa18.4■□□□□ 0.54
RNF4-212ENST00000509258 FAM9AQ8IZU1 332 aaPredicted RBP18.4■□□□□ 0.54
RNF4-212ENST00000509258 EEA1Q15075 1411 aa18.39■□□□□ 0.53
RNF4-212ENST00000509258 CD109Q6YHK3 1445 aa18.39■□□□□ 0.53
RNF4-212ENST00000509258 P3H3Q8IVL6 736 aa18.38■□□□□ 0.53
RNF4-212ENST00000509258 KIF21BO75037 1637 aa18.38■□□□□ 0.53
RNF4-212ENST00000509258 CHIC1Q5VXU3 224 aa18.36■□□□□ 0.53
RNF4-212ENST00000509258 KCNH8Q96L42 1107 aa18.34■□□□□ 0.53
RNF4-212ENST00000509258 RAPGEF6Q8TEU7 1601 aa18.31■□□□□ 0.52
RNF4-212ENST00000509258 ARID3CA6NKF2 412 aa18.3■□□□□ 0.52
RNF4-212ENST00000509258 ATP10BO94823 1461 aa18.29■□□□□ 0.52
RNF4-212ENST00000509258 RANGAP1P46060 587 aaPredicted RBP18.28■□□□□ 0.52
RNF4-212ENST00000509258 FHOD3Q2V2M9 1422 aa18.28■□□□□ 0.52
RNF4-212ENST00000509258 ARAP3Q8WWN8 1544 aa18.25■□□□□ 0.51
RNF4-212ENST00000509258 ABCA9Q8IUA7 1624 aa18.24■□□□□ 0.51
RNF4-212ENST00000509258 EHMT2Q96KQ7 1210 aa18.24■□□□□ 0.51
RNF4-212ENST00000509258 NUP153P49790 1475 aaKnown RBP18.23■□□□□ 0.51
RNF4-212ENST00000509258 PHLDB1Q86UU1 1377 aa18.22■□□□□ 0.51
RNF4-212ENST00000509258 HECW2Q9P2P5 1572 aa18.21■□□□□ 0.51
RNF4-212ENST00000509258 EFCAB5A4FU69 1503 aa18.19■□□□□ 0.5
RNF4-212ENST00000509258 NEO1Q92859 1461 aa18.18■□□□□ 0.5
RNF4-212ENST00000509258 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.16■□□□□ 0.5
RNF4-212ENST00000509258 HNRNPUL2Q1KMD3 747 aaKnown RBP18.16■□□□□ 0.5
RNF4-212ENST00000509258 ILDR1Q86SU0 546 aaPredicted RBP18.13■□□□□ 0.49
RNF4-212ENST00000509258 ARHGAP35Q9NRY4 1499 aa18.13■□□□□ 0.49
RNF4-212ENST00000509258 LRRIQ1Q96JM4 1722 aa18.12■□□□□ 0.49
RNF4-212ENST00000509258 CDK13Q14004 1512 aaKnown RBP18.11■□□□□ 0.49
RNF4-212ENST00000509258 FRMPD1Q5SYB0 1578 aa18.09■□□□□ 0.49
RNF4-212ENST00000509258 RAPGEF3O95398 923 aa18.09■□□□□ 0.49
RNF4-212ENST00000509258 UBTFP17480 764 aaKnown RBP18.09■□□□□ 0.49
RNF4-212ENST00000509258 PLEKHD1A6NEE1 506 aa18.07■□□□□ 0.48
RNF4-212ENST00000509258 TTC37Q6PGP7 1564 aa18.06■□□□□ 0.48
RNF4-212ENST00000509258 CFAP74Q9C0B2 1584 aa18.05■□□□□ 0.48
RNF4-212ENST00000509258 ADAMTSL3P82987 1691 aa18.05■□□□□ 0.48
RNF4-212ENST00000509258 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.04■□□□□ 0.48
RNF4-212ENST00000509258 ARHGEF40Q8TER5 1519 aa18.04■□□□□ 0.48
RNF4-212ENST00000509258 PTPRMP28827 1452 aa18.04■□□□□ 0.48
RNF4-212ENST00000509258 FANCAO15360 1455 aa18.03■□□□□ 0.48
RNF4-212ENST00000509258 DENND4BO75064 1496 aaPredicted RBP18.03■□□□□ 0.48
RNF4-212ENST00000509258 HECW1Q76N89 1606 aa18.01■□□□□ 0.47
RNF4-212ENST00000509258 BCORL1Q5H9F3 1711 aa18.01■□□□□ 0.47
RNF4-212ENST00000509258 AKNAQ7Z591 1439 aa18■□□□□ 0.47
RNF4-212ENST00000509258 RICTORQ6R327 1708 aa18■□□□□ 0.47
RNF4-212ENST00000509258 ARID4BQ4LE39 1312 aaPredicted RBP17.99■□□□□ 0.47
RNF4-212ENST00000509258 MADDQ8WXG6 1647 aa17.98■□□□□ 0.47
RNF4-212ENST00000509258 KIF14Q15058 1648 aa17.98■□□□□ 0.47
RNF4-212ENST00000509258 ZMYM4Q5VZL5 1548 aa17.98■□□□□ 0.47
RNF4-212ENST00000509258 PCF11O94913 1555 aaKnown RBP17.97■□□□□ 0.47
RNF4-212ENST00000509258 FMN1Q68DA7 1419 aa17.97■□□□□ 0.47
RNF4-212ENST00000509258 MAGI2Q86UL8 1455 aa17.94■□□□□ 0.46
RNF4-212ENST00000509258 ZFYVE16Q7Z3T8 1539 aa17.93■□□□□ 0.46
RNF4-212ENST00000509258 POGZQ7Z3K3 1410 aa17.92■□□□□ 0.46
RNF4-212ENST00000509258 MYO5CQ9NQX4 1742 aa17.92■□□□□ 0.46
RNF4-212ENST00000509258 PLCH2O75038 1416 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms