RNA–Protein interactions for RNA: ENST00000508963.1

RACK1-220, Transcript of receptor for activated C kinase 1, humanhuman

TSL 2

Gene RACK1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-220ENST00000508963 KIAA0586Q9BVV6 1533 aa10.19□□□□□ -0.78
RACK1-220ENST00000508963 CEP170Q5SW79 1584 aa10.18□□□□□ -0.78
RACK1-220ENST00000508963 JPH4Q96JJ6 628 aa10.18□□□□□ -0.78
RACK1-220ENST00000508963 CHD1O14646 1710 aa10.17□□□□□ -0.78
RACK1-220ENST00000508963 CLASP1Q7Z460 1538 aa10.13□□□□□ -0.79
RACK1-220ENST00000508963 UGGT2Q9NYU1 1516 aa10.11□□□□□ -0.79
RACK1-220ENST00000508963 IQGAP2Q13576 1575 aa10.1□□□□□ -0.79
RACK1-220ENST00000508963 CEP162Q5TB80 1403 aa10.1□□□□□ -0.79
RACK1-220ENST00000508963 DISP1Q96F81 1524 aa10.09□□□□□ -0.79
RACK1-220ENST00000508963 RANGAP1P46060 587 aaPredicted RBP10.09□□□□□ -0.79
RACK1-220ENST00000508963 ARHGAP35Q9NRY4 1499 aa10.09□□□□□ -0.79
RACK1-220ENST00000508963 CTTNBP2Q8WZ74 1663 aa10.09□□□□□ -0.79
RACK1-220ENST00000508963 CLIP1P30622 1438 aa10.08□□□□□ -0.8
RACK1-220ENST00000508963 PRG4Q92954 1404 aaPredicted RBP10.08□□□□□ -0.8
RACK1-220ENST00000508963 SHROOM2Q13796 1616 aa10.08□□□□□ -0.8
RACK1-220ENST00000508963 P3H3Q8IVL6 736 aa10.07□□□□□ -0.8
RACK1-220ENST00000508963 SAMD9Q5K651 1589 aa10.05□□□□□ -0.8
RACK1-220ENST00000508963 ARAP1Q96P48 1450 aa10.04□□□□□ -0.8
RACK1-220ENST00000508963 CARMIL2Q6F5E8 1435 aa10.04□□□□□ -0.8
RACK1-220ENST00000508963 ERCC6L2Q5T890 1561 aa10.04□□□□□ -0.8
RACK1-220ENST00000508963 EFCAB5A4FU69 1503 aa10.02□□□□□ -0.8
RACK1-220ENST00000508963 FHOD3Q2V2M9 1422 aa10.01□□□□□ -0.81
RACK1-220ENST00000508963 KIAA0556O60303 1618 aa10.01□□□□□ -0.81
RACK1-220ENST00000508963 DNAJC5Q9H3Z4 198 aa10.01□□□□□ -0.81
RACK1-220ENST00000508963 PTPRGP23470 1445 aa10□□□□□ -0.81
RACK1-220ENST00000508963 ARHGEF11O15085 1522 aa9.97□□□□□ -0.81
RACK1-220ENST00000508963 FMN1Q68DA7 1419 aa9.97□□□□□ -0.81
RACK1-220ENST00000508963 VPS8Q8N3P4 1428 aa9.96□□□□□ -0.82
RACK1-220ENST00000508963 TTBK1Q5TCY1 1321 aaPredicted RBP9.95□□□□□ -0.82
RACK1-220ENST00000508963 PLB1Q6P1J6 1458 aa9.94□□□□□ -0.82
RACK1-220ENST00000508963 CASKIN1Q8WXD9 1431 aa9.94□□□□□ -0.82
RACK1-220ENST00000508963 UACAQ9BZF9 1416 aa9.93□□□□□ -0.82
RACK1-220ENST00000508963 CYB5RLQ6IPT4 315 aa9.93□□□□□ -0.82
RACK1-220ENST00000508963 RIMBP3CA6NJZ7 1639 aa9.93□□□□□ -0.82
RACK1-220ENST00000508963 RIMBP3BA6NNM3 1639 aa9.93□□□□□ -0.82
RACK1-220ENST00000508963 RIMBP3Q9UFD9 1639 aa9.93□□□□□ -0.82
RACK1-220ENST00000508963 ABCA8O94911 1581 aa9.92□□□□□ -0.82
RACK1-220ENST00000508963 UHRF1BP1LA0JNW5 1464 aa9.91□□□□□ -0.82
RACK1-220ENST00000508963 ATP10BO94823 1461 aa9.9□□□□□ -0.83
RACK1-220ENST00000508963 NUP153P49790 1475 aaKnown RBP9.9□□□□□ -0.83
RACK1-220ENST00000508963 FYCO1Q9BQS8 1478 aa9.89□□□□□ -0.83
RACK1-220ENST00000508963 KANK4Q5T7N3 995 aaPredicted RBP9.88□□□□□ -0.83
RACK1-220ENST00000508963 ATP1B4Q9UN42 357 aaPredicted RBP9.88□□□□□ -0.83
RACK1-220ENST00000508963 ABCC2Q92887 1545 aa9.87□□□□□ -0.83
RACK1-220ENST00000508963 RAPGEF6Q8TEU7 1601 aa9.87□□□□□ -0.83
RACK1-220ENST00000508963 PCF11O94913 1555 aaKnown RBP9.87□□□□□ -0.83
RACK1-220ENST00000508963 EPRSP07814 1512 aaKnown RBP9.87□□□□□ -0.83
RACK1-220ENST00000508963 MAP3K1Q13233 1512 aa9.87□□□□□ -0.83
RACK1-220ENST00000508963 KDM5BQ9UGL1 1544 aa9.87□□□□□ -0.83
RACK1-220ENST00000508963 ARID3CA6NKF2 412 aa9.85□□□□□ -0.83
RACK1-220ENST00000508963 ADCY10Q96PN6 1610 aa9.85□□□□□ -0.83
RACK1-220ENST00000508963 LRRIQ1Q96JM4 1722 aa9.83□□□□□ -0.84
RACK1-220ENST00000508963 CDK13Q14004 1512 aaKnown RBP9.82□□□□□ -0.84
RACK1-220ENST00000508963 HECW1Q76N89 1606 aa9.82□□□□□ -0.84
RACK1-220ENST00000508963 PLEKHD1A6NEE1 506 aa9.82□□□□□ -0.84
RACK1-220ENST00000508963 NPM1P06748 294 aaKnown RBP eCLIP9.82□□□□□ -0.84
RACK1-220ENST00000508963 APLP2Q06481 763 aa9.82□□□□□ -0.84
RACK1-220ENST00000508963 CCDC18Q5T9S5 1454 aa9.81□□□□□ -0.84
RACK1-220ENST00000508963 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.81□□□□□ -0.84
RACK1-220ENST00000508963 HNRNPUL2Q1KMD3 747 aaKnown RBP9.81□□□□□ -0.84
RACK1-220ENST00000508963 PPARGC1BQ86YN6 1023 aaKnown RBP9.81□□□□□ -0.84
RACK1-220ENST00000508963 CDK11AQ9UQ88 783 aaPredicted RBP9.81□□□□□ -0.84
RACK1-220ENST00000508963 MAGI3Q5TCQ9 1506 aa9.81□□□□□ -0.84
RACK1-220ENST00000508963 TIAM1Q13009 1591 aa9.8□□□□□ -0.84
RACK1-220ENST00000508963 LRRC9Q6ZRR7 1453 aa9.8□□□□□ -0.84
RACK1-220ENST00000508963 ZCCHC11Q5TAX3 1644 aaKnown RBP9.78□□□□□ -0.84
RACK1-220ENST00000508963 TROQ12816 1431 aaPredicted RBP9.77□□□□□ -0.85
RACK1-220ENST00000508963 ASXL2Q76L83 1435 aa9.77□□□□□ -0.85
RACK1-220ENST00000508963 MTUS2Q5JR59 1369 aa9.76□□□□□ -0.85
RACK1-220ENST00000508963 KCNH8Q96L42 1107 aa9.76□□□□□ -0.85
RACK1-220ENST00000508963 CFAP43Q8NDM7 1665 aa9.75□□□□□ -0.85
RACK1-220ENST00000508963 WDR7Q9Y4E6 1490 aa9.74□□□□□ -0.85
RACK1-220ENST00000508963 MAPKBP1O60336 1514 aa9.74□□□□□ -0.85
RACK1-220ENST00000508963 ABCC10Q5T3U5 1492 aa9.73□□□□□ -0.85
RACK1-220ENST00000508963 PHLDB1Q86UU1 1377 aa9.73□□□□□ -0.85
RACK1-220ENST00000508963 NCOA2Q15596 1464 aa9.72□□□□□ -0.85
RACK1-220ENST00000508963 EHBP1L1Q8N3D4 1523 aa9.72□□□□□ -0.85
RACK1-220ENST00000508963 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.7□□□□□ -0.861e-34■■□□□ 13
RACK1-220ENST00000508963 GPATCH8Q9UKJ3 1502 aaKnown RBP9.7□□□□□ -0.86
RACK1-220ENST00000508963 FAM69CQ0P6D2 419 aa9.69□□□□□ -0.86
RACK1-220ENST00000508963 KIF14Q15058 1648 aa9.69□□□□□ -0.86
RACK1-220ENST00000508963 PLCH2O75038 1416 aa9.68□□□□□ -0.86
RACK1-220ENST00000508963 GLI2P10070 1586 aa9.67□□□□□ -0.86
RACK1-220ENST00000508963 CCNB3Q8WWL7 1395 aa9.67□□□□□ -0.86
RACK1-220ENST00000508963 MYOM3Q5VTT5 1437 aa9.66□□□□□ -0.86
RACK1-220ENST00000508963 ZNF644Q9H582 1327 aaPredicted RBP9.66□□□□□ -0.86
RACK1-220ENST00000508963 SUPT6HQ7KZ85 1726 aaKnown RBP9.66□□□□□ -0.86
RACK1-220ENST00000508963 CFDP1Q9UEE9 299 aaPredicted RBP9.66□□□□□ -0.86
RACK1-220ENST00000508963 CD109Q6YHK3 1445 aa9.65□□□□□ -0.86
RACK1-220ENST00000508963 MIA2Q96PC5 1412 aa9.65□□□□□ -0.86
RACK1-220ENST00000508963 RRBP1Q9P2E9 1410 aaKnown RBP9.65□□□□□ -0.86
RACK1-220ENST00000508963 ABCA9Q8IUA7 1624 aa9.65□□□□□ -0.86
RACK1-220ENST00000508963 TTC37Q6PGP7 1564 aa9.64□□□□□ -0.87
RACK1-220ENST00000508963 DIP2BQ9P265 1576 aa9.64□□□□□ -0.87
RACK1-220ENST00000508963 EFCAB2Q5VUJ9 269 aa9.64□□□□□ -0.87
RACK1-220ENST00000508963 FGD6Q6ZV73 1430 aa9.64□□□□□ -0.87
RACK1-220ENST00000508963 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.63□□□□□ -0.87
RACK1-220ENST00000508963 TRIM26Q12899 539 aaPredicted RBP9.63□□□□□ -0.87
RACK1-220ENST00000508963 ARAP3Q8WWN8 1544 aa9.62□□□□□ -0.87
RACK1-220ENST00000508963 TCOF1Q13428 1488 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms