RNA–Protein interactions for RNA: ENST00000508910.5

POLR2J3-214, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-214ENST00000508910 FBLN2P98095 1184 aa17.58■□□□□ 0.4
POLR2J3-214ENST00000508910 NUP160Q12769 1436 aa17.56■□□□□ 0.4
POLR2J3-214ENST00000508910 CEP170Q5SW79 1584 aa17.56■□□□□ 0.4
POLR2J3-214ENST00000508910 CEP162Q5TB80 1403 aa17.54■□□□□ 0.4
POLR2J3-214ENST00000508910 IQGAP2Q13576 1575 aa17.53■□□□□ 0.4
POLR2J3-214ENST00000508910 KIAA0586Q9BVV6 1533 aa17.52■□□□□ 0.4
POLR2J3-214ENST00000508910 CLIP1P30622 1438 aa17.48■□□□□ 0.39
POLR2J3-214ENST00000508910 EFCAB5A4FU69 1503 aa17.46■□□□□ 0.39
POLR2J3-214ENST00000508910 CLASP1Q7Z460 1538 aa17.45■□□□□ 0.38
POLR2J3-214ENST00000508910 UGGT2Q9NYU1 1516 aa17.44■□□□□ 0.38
POLR2J3-214ENST00000508910 SAMD9Q5K651 1589 aa17.43■□□□□ 0.38
POLR2J3-214ENST00000508910 ARHGAP35Q9NRY4 1499 aa17.41■□□□□ 0.38
POLR2J3-214ENST00000508910 RANGAP1P46060 587 aaPredicted RBP17.4■□□□□ 0.38
POLR2J3-214ENST00000508910 SHROOM2Q13796 1616 aa17.39■□□□□ 0.38
POLR2J3-214ENST00000508910 KIAA0556O60303 1618 aa17.36■□□□□ 0.37
POLR2J3-214ENST00000508910 ARAP1Q96P48 1450 aa17.36■□□□□ 0.37
POLR2J3-214ENST00000508910 OSCARQ8IYS5 282 aa17.34■□□□□ 0.37
POLR2J3-214ENST00000508910 DISP1Q96F81 1524 aa17.34■□□□□ 0.37
POLR2J3-214ENST00000508910 JPH4Q96JJ6 628 aa17.33■□□□□ 0.36
POLR2J3-214ENST00000508910 CARMIL2Q6F5E8 1435 aa17.32■□□□□ 0.36
POLR2J3-214ENST00000508910 FHOD3Q2V2M9 1422 aa17.31■□□□□ 0.36
POLR2J3-214ENST00000508910 VPS8Q8N3P4 1428 aa17.3■□□□□ 0.36
POLR2J3-214ENST00000508910 PRG4Q92954 1404 aaPredicted RBP17.3■□□□□ 0.36
POLR2J3-214ENST00000508910 P3H3Q8IVL6 736 aa17.26■□□□□ 0.35
POLR2J3-214ENST00000508910 FMN1Q68DA7 1419 aa17.26■□□□□ 0.35
POLR2J3-214ENST00000508910 ERCC6L2Q5T890 1561 aa17.22■□□□□ 0.35
POLR2J3-214ENST00000508910 PCF11O94913 1555 aaKnown RBP17.21■□□□□ 0.35
POLR2J3-214ENST00000508910 FYCO1Q9BQS8 1478 aa17.19■□□□□ 0.34
POLR2J3-214ENST00000508910 CASKIN1Q8WXD9 1431 aa17.18■□□□□ 0.34
POLR2J3-214ENST00000508910 PTPRGP23470 1445 aa17.15■□□□□ 0.34
POLR2J3-214ENST00000508910 HECW1Q76N89 1606 aa17.15■□□□□ 0.34
POLR2J3-214ENST00000508910 RAPGEF6Q8TEU7 1601 aa17.14■□□□□ 0.33
POLR2J3-214ENST00000508910 ARHGEF11O15085 1522 aa17.12■□□□□ 0.33
POLR2J3-214ENST00000508910 ABCA8O94911 1581 aa17.12■□□□□ 0.33
POLR2J3-214ENST00000508910 PLB1Q6P1J6 1458 aa17.11■□□□□ 0.33
POLR2J3-214ENST00000508910 TTBK1Q5TCY1 1321 aaPredicted RBP17.1■□□□□ 0.33
POLR2J3-214ENST00000508910 CFAP43Q8NDM7 1665 aa17.1■□□□□ 0.33
POLR2J3-214ENST00000508910 MAP3K1Q13233 1512 aa17.08■□□□□ 0.32
POLR2J3-214ENST00000508910 CCDC18Q5T9S5 1454 aa17.08■□□□□ 0.32
POLR2J3-214ENST00000508910 NUP153P49790 1475 aaKnown RBP17.07■□□□□ 0.32
POLR2J3-214ENST00000508910 RIMBP3CA6NJZ7 1639 aa17.07■□□□□ 0.32
POLR2J3-214ENST00000508910 RIMBP3BA6NNM3 1639 aa17.07■□□□□ 0.32
POLR2J3-214ENST00000508910 RIMBP3Q9UFD9 1639 aa17.07■□□□□ 0.32
POLR2J3-214ENST00000508910 TIAM1Q13009 1591 aa17.06■□□□□ 0.32
POLR2J3-214ENST00000508910 UACAQ9BZF9 1416 aa17.06■□□□□ 0.32
POLR2J3-214ENST00000508910 APLP2Q06481 763 aa17.06■□□□□ 0.32
POLR2J3-214ENST00000508910 LRRIQ1Q96JM4 1722 aa17.06■□□□□ 0.32
POLR2J3-214ENST00000508910 ABCC2Q92887 1545 aa17.06■□□□□ 0.32
POLR2J3-214ENST00000508910 ATP1B4Q9UN42 357 aaPredicted RBP17.04■□□□□ 0.32
POLR2J3-214ENST00000508910 EPRSP07814 1512 aaKnown RBP17.04■□□□□ 0.32
POLR2J3-214ENST00000508910 UHRF1BP1LA0JNW5 1464 aa17.04■□□□□ 0.32
POLR2J3-214ENST00000508910 CDK13Q14004 1512 aaKnown RBP17.01■□□□□ 0.31
POLR2J3-214ENST00000508910 ADCY10Q96PN6 1610 aa16.99■□□□□ 0.31
POLR2J3-214ENST00000508910 LRRC9Q6ZRR7 1453 aa16.96■□□□□ 0.31
POLR2J3-214ENST00000508910 EHBP1L1Q8N3D4 1523 aa16.96■□□□□ 0.3
POLR2J3-214ENST00000508910 ATP10BO94823 1461 aa16.95■□□□□ 0.3
POLR2J3-214ENST00000508910 KDM5BQ9UGL1 1544 aa16.95■□□□□ 0.3
POLR2J3-214ENST00000508910 ZCCHC11Q5TAX3 1644 aaKnown RBP16.94■□□□□ 0.3
POLR2J3-214ENST00000508910 ARID3CA6NKF2 412 aa16.93■□□□□ 0.3
POLR2J3-214ENST00000508910 MAGI3Q5TCQ9 1506 aa16.91■□□□□ 0.3
POLR2J3-214ENST00000508910 MTUS2Q5JR59 1369 aa16.91■□□□□ 0.3
POLR2J3-214ENST00000508910 KANK4Q5T7N3 995 aaPredicted RBP16.91■□□□□ 0.3
POLR2J3-214ENST00000508910 CDK11AQ9UQ88 783 aaPredicted RBP16.91■□□□□ 0.3
POLR2J3-214ENST00000508910 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.9■□□□□ 0.3
POLR2J3-214ENST00000508910 HNRNPUL2Q1KMD3 747 aaKnown RBP16.9■□□□□ 0.3
POLR2J3-214ENST00000508910 PPARGC1BQ86YN6 1023 aaKnown RBP16.89■□□□□ 0.29
POLR2J3-214ENST00000508910 TROQ12816 1431 aaPredicted RBP16.87■□□□□ 0.29
POLR2J3-214ENST00000508910 SUPT6HQ7KZ85 1726 aaKnown RBP16.87■□□□□ 0.29
POLR2J3-214ENST00000508910 CYB5RLQ6IPT4 315 aa16.86■□□□□ 0.29
POLR2J3-214ENST00000508910 KIF14Q15058 1648 aa16.84■□□□□ 0.29
POLR2J3-214ENST00000508910 PLEKHD1A6NEE1 506 aa16.83■□□□□ 0.28
POLR2J3-214ENST00000508910 NCOA2Q15596 1464 aa16.82■□□□□ 0.28
POLR2J3-214ENST00000508910 NPM1P06748 294 aaKnown RBP eCLIP16.82■□□□□ 0.28
POLR2J3-214ENST00000508910 WDR7Q9Y4E6 1490 aa16.8■□□□□ 0.28
POLR2J3-214ENST00000508910 DNAJC5Q9H3Z4 198 aa16.8■□□□□ 0.28
POLR2J3-214ENST00000508910 MAPKBP1O60336 1514 aa16.79■□□□□ 0.28
POLR2J3-214ENST00000508910 ASXL2Q76L83 1435 aa16.79■□□□□ 0.28
POLR2J3-214ENST00000508910 PHLDB1Q86UU1 1377 aa16.76■□□□□ 0.27
POLR2J3-214ENST00000508910 ITSN2Q9NZM3 1697 aa16.75■□□□□ 0.27
POLR2J3-214ENST00000508910 ABCC10Q5T3U5 1492 aa16.74■□□□□ 0.27
POLR2J3-214ENST00000508910 MYOM3Q5VTT5 1437 aa16.74■□□□□ 0.27
POLR2J3-214ENST00000508910 TTC37Q6PGP7 1564 aa16.72■□□□□ 0.27
POLR2J3-214ENST00000508910 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.72■□□□□ 0.27
POLR2J3-214ENST00000508910 CCNB3Q8WWL7 1395 aa16.72■□□□□ 0.27
POLR2J3-214ENST00000508910 RRBP1Q9P2E9 1410 aaKnown RBP16.71■□□□□ 0.27
POLR2J3-214ENST00000508910 TRIM26Q12899 539 aaPredicted RBP16.7■□□□□ 0.26
POLR2J3-214ENST00000508910 CDC42BPAQ5VT25 1732 aa16.7■□□□□ 0.26
POLR2J3-214ENST00000508910 ABCA9Q8IUA7 1624 aa16.7■□□□□ 0.26
POLR2J3-214ENST00000508910 FGD6Q6ZV73 1430 aa16.7■□□□□ 0.26
POLR2J3-214ENST00000508910 PREX2Q70Z35 1606 aa16.69■□□□□ 0.26
POLR2J3-214ENST00000508910 MYO5CQ9NQX4 1742 aa16.68■□□□□ 0.26
POLR2J3-214ENST00000508910 KCNH8Q96L42 1107 aa16.68■□□□□ 0.26
POLR2J3-214ENST00000508910 GPATCH8Q9UKJ3 1502 aaKnown RBP16.68■□□□□ 0.26
POLR2J3-214ENST00000508910 MIA2Q96PC5 1412 aa16.68■□□□□ 0.26
POLR2J3-214ENST00000508910 PTPN23Q9H3S7 1636 aa16.66■□□□□ 0.26
POLR2J3-214ENST00000508910 ARAP3Q8WWN8 1544 aa16.65■□□□□ 0.26
POLR2J3-214ENST00000508910 TCOF1Q13428 1488 aaKnown RBP16.64■□□□□ 0.25
POLR2J3-214ENST00000508910 GLI2P10070 1586 aa16.64■□□□□ 0.25
POLR2J3-214ENST00000508910 DIP2BQ9P265 1576 aa16.64■□□□□ 0.25
POLR2J3-214ENST00000508910 CDC42BPBQ9Y5S2 1711 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms