RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 SHROOM2Q13796 1616 aa17.84■□□□□ 0.45
POLR2J3-213ENST00000508848 RUSC2Q8N2Y8 1516 aa17.83■□□□□ 0.45
POLR2J3-213ENST00000508848 KIAA0586Q9BVV6 1533 aa17.83■□□□□ 0.45
POLR2J3-213ENST00000508848 RAPGEF2Q9Y4G8 1499 aa17.82■□□□□ 0.44
POLR2J3-213ENST00000508848 JPH4Q96JJ6 628 aa17.8■□□□□ 0.44
POLR2J3-213ENST00000508848 PRXQ9BXM0 1461 aa17.78■□□□□ 0.44
POLR2J3-213ENST00000508848 POTEDQ86YR6 584 aa17.78■□□□□ 0.44
POLR2J3-213ENST00000508848 CSRNP3Q8WYN3 585 aa17.77■□□□□ 0.44
POLR2J3-213ENST00000508848 ARAP1Q96P48 1450 aa17.75■□□□□ 0.43
POLR2J3-213ENST00000508848 CYB5RLQ6IPT4 315 aa17.73■□□□□ 0.43
POLR2J3-213ENST00000508848 PRG4Q92954 1404 aaPredicted RBP17.7■□□□□ 0.42
POLR2J3-213ENST00000508848 IQGAP2Q13576 1575 aa17.67■□□□□ 0.42
POLR2J3-213ENST00000508848 ERCC6L2Q5T890 1561 aa17.65■□□□□ 0.42
POLR2J3-213ENST00000508848 UGGT2Q9NYU1 1516 aa17.63■□□□□ 0.41
POLR2J3-213ENST00000508848 CARMIL2Q6F5E8 1435 aa17.63■□□□□ 0.41
POLR2J3-213ENST00000508848 CTTNBP2Q8WZ74 1663 aa17.62■□□□□ 0.41
POLR2J3-213ENST00000508848 KIF21BO75037 1637 aa17.59■□□□□ 0.41
POLR2J3-213ENST00000508848 TNIKQ9UKE5 1360 aa17.55■□□□□ 0.4
POLR2J3-213ENST00000508848 DISP1Q96F81 1524 aa17.55■□□□□ 0.4
POLR2J3-213ENST00000508848 GOLGA3Q08378 1498 aa17.55■□□□□ 0.4
POLR2J3-213ENST00000508848 PTPRGP23470 1445 aa17.53■□□□□ 0.4
POLR2J3-213ENST00000508848 FAM9AQ8IZU1 332 aaPredicted RBP17.48■□□□□ 0.39
POLR2J3-213ENST00000508848 KIAA0556O60303 1618 aa17.47■□□□□ 0.39
POLR2J3-213ENST00000508848 UHRF1BP1LA0JNW5 1464 aa17.46■□□□□ 0.39
POLR2J3-213ENST00000508848 NPM1P06748 294 aaKnown RBP eCLIP17.43■□□□□ 0.38
POLR2J3-213ENST00000508848 ADCY10Q96PN6 1610 aa17.42■□□□□ 0.38
POLR2J3-213ENST00000508848 SAMD9Q5K651 1589 aa17.41■□□□□ 0.38
POLR2J3-213ENST00000508848 UACAQ9BZF9 1416 aa17.41■□□□□ 0.38
POLR2J3-213ENST00000508848 MAPKBP1O60336 1514 aa17.39■□□□□ 0.37
POLR2J3-213ENST00000508848 ABCC2Q92887 1545 aa17.37■□□□□ 0.37
POLR2J3-213ENST00000508848 EFCAB5A4FU69 1503 aa17.37■□□□□ 0.37
POLR2J3-213ENST00000508848 UBTFP17480 764 aaKnown RBP17.36■□□□□ 0.37
POLR2J3-213ENST00000508848 KDM5BQ9UGL1 1544 aa17.36■□□□□ 0.37
POLR2J3-213ENST00000508848 ABCA8O94911 1581 aa17.33■□□□□ 0.37
POLR2J3-213ENST00000508848 TRHP20396 242 aaPredicted RBP17.3■□□□□ 0.36
POLR2J3-213ENST00000508848 PLB1Q6P1J6 1458 aa17.29■□□□□ 0.36
POLR2J3-213ENST00000508848 ABCC10Q5T3U5 1492 aa17.28■□□□□ 0.36
POLR2J3-213ENST00000508848 KIF13AQ9H1H9 1805 aa17.26■□□□□ 0.35
POLR2J3-213ENST00000508848 TTBK1Q5TCY1 1321 aaPredicted RBP17.24■□□□□ 0.35
POLR2J3-213ENST00000508848 P3H3Q8IVL6 736 aa17.24■□□□□ 0.35
POLR2J3-213ENST00000508848 ZCCHC11Q5TAX3 1644 aaKnown RBP17.23■□□□□ 0.35
POLR2J3-213ENST00000508848 ASXL2Q76L83 1435 aa17.22■□□□□ 0.35
POLR2J3-213ENST00000508848 ARHGAP35Q9NRY4 1499 aa17.22■□□□□ 0.35
POLR2J3-213ENST00000508848 FMN1Q68DA7 1419 aa17.21■□□□□ 0.35
POLR2J3-213ENST00000508848 RAPGEF6Q8TEU7 1601 aa17.21■□□□□ 0.35
POLR2J3-213ENST00000508848 GLI2P10070 1586 aa17.21■□□□□ 0.35
POLR2J3-213ENST00000508848 DIP2BQ9P265 1576 aa17.2■□□□□ 0.34
POLR2J3-213ENST00000508848 FHOD3Q2V2M9 1422 aa17.2■□□□□ 0.34
POLR2J3-213ENST00000508848 ATP10BO94823 1461 aa17.19■□□□□ 0.34
POLR2J3-213ENST00000508848 FAM69CQ0P6D2 419 aa17.18■□□□□ 0.34
POLR2J3-213ENST00000508848 FOXD1Q16676 465 aa17.16■□□□□ 0.34
POLR2J3-213ENST00000508848 NUP153P49790 1475 aaKnown RBP17.15■□□□□ 0.34
POLR2J3-213ENST00000508848 WDR7Q9Y4E6 1490 aa17.15■□□□□ 0.34
POLR2J3-213ENST00000508848 RANGAP1P46060 587 aaPredicted RBP17.14■□□□□ 0.33
POLR2J3-213ENST00000508848 EPRSP07814 1512 aaKnown RBP17.13■□□□□ 0.33
POLR2J3-213ENST00000508848 EHMT2Q96KQ7 1210 aa17.12■□□□□ 0.33
POLR2J3-213ENST00000508848 CLIP1P30622 1438 aa17.12■□□□□ 0.33
POLR2J3-213ENST00000508848 MAP3K4Q9Y6R4 1608 aa17.08■□□□□ 0.32
POLR2J3-213ENST00000508848 CASKIN1Q8WXD9 1431 aa17.07■□□□□ 0.32
POLR2J3-213ENST00000508848 PLEKHD1A6NEE1 506 aa17.07■□□□□ 0.32
POLR2J3-213ENST00000508848 CFAP43Q8NDM7 1665 aa17.06■□□□□ 0.32
POLR2J3-213ENST00000508848 HECW1Q76N89 1606 aa17.06■□□□□ 0.32
POLR2J3-213ENST00000508848 CDK11AQ9UQ88 783 aaPredicted RBP17.05■□□□□ 0.32
POLR2J3-213ENST00000508848 MAGI3Q5TCQ9 1506 aa17.03■□□□□ 0.32
POLR2J3-213ENST00000508848 CEP162Q5TB80 1403 aa17.03■□□□□ 0.32
POLR2J3-213ENST00000508848 TEX14Q8IWB6 1497 aa17.02■□□□□ 0.32
POLR2J3-213ENST00000508848 FYCO1Q9BQS8 1478 aa17.02■□□□□ 0.32
POLR2J3-213ENST00000508848 LOC105371045A0A1W2PR82 267 aa17.02■□□□□ 0.32
POLR2J3-213ENST00000508848 PPRC1Q5VV67 1664 aaKnown RBP17.01■□□□□ 0.31
POLR2J3-213ENST00000508848 ABCA9Q8IUA7 1624 aa17.01■□□□□ 0.31
POLR2J3-213ENST00000508848 TSPOAP1O95153 1857 aa17.01■□□□□ 0.31
POLR2J3-213ENST00000508848 PHLDB1Q86UU1 1377 aa17.01■□□□□ 0.31
POLR2J3-213ENST00000508848 CCDC18Q5T9S5 1454 aa17■□□□□ 0.31
POLR2J3-213ENST00000508848 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17■□□□□ 0.31
POLR2J3-213ENST00000508848 HNRNPUL2Q1KMD3 747 aaKnown RBP17■□□□□ 0.31
POLR2J3-213ENST00000508848 CD109Q6YHK3 1445 aa17■□□□□ 0.31
POLR2J3-213ENST00000508848 KCNH8Q96L42 1107 aa17■□□□□ 0.31
POLR2J3-213ENST00000508848 LRRIQ1Q96JM4 1722 aa16.96■□□□□ 0.31
POLR2J3-213ENST00000508848 ARID3CA6NKF2 412 aa16.95■□□□□ 0.3
POLR2J3-213ENST00000508848 CDK13Q14004 1512 aaKnown RBP16.95■□□□□ 0.3
POLR2J3-213ENST00000508848 PCF11O94913 1555 aaKnown RBP16.94■□□□□ 0.3
POLR2J3-213ENST00000508848 TROQ12816 1431 aaPredicted RBP16.93■□□□□ 0.3
POLR2J3-213ENST00000508848 ATP1B4Q9UN42 357 aaPredicted RBP16.92■□□□□ 0.3
POLR2J3-213ENST00000508848 KDM6BO15054 1643 aa16.9■□□□□ 0.3
POLR2J3-213ENST00000508848 NEO1Q92859 1461 aa16.9■□□□□ 0.3
POLR2J3-213ENST00000508848 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.9■□□□□ 0.3
POLR2J3-213ENST00000508848 ARAP3Q8WWN8 1544 aa16.9■□□□□ 0.3
POLR2J3-213ENST00000508848 PLCH2O75038 1416 aa16.87■□□□□ 0.29
POLR2J3-213ENST00000508848 VPS8Q8N3P4 1428 aa16.87■□□□□ 0.29
POLR2J3-213ENST00000508848 MAP3K1Q13233 1512 aa16.86■□□□□ 0.29
POLR2J3-213ENST00000508848 KIF14Q15058 1648 aa16.85■□□□□ 0.29
POLR2J3-213ENST00000508848 CFAP74Q9C0B2 1584 aa16.85■□□□□ 0.29
POLR2J3-213ENST00000508848 COL17A1Q9UMD9 1497 aaPredicted RBP16.84■□□□□ 0.29
POLR2J3-213ENST00000508848 TTC37Q6PGP7 1564 aa16.82■□□□□ 0.28
POLR2J3-213ENST00000508848 MYO5CQ9NQX4 1742 aa16.82■□□□□ 0.28
POLR2J3-213ENST00000508848 EFCAB2Q5VUJ9 269 aa16.81■□□□□ 0.28
POLR2J3-213ENST00000508848 FANCAO15360 1455 aa16.8■□□□□ 0.28
POLR2J3-213ENST00000508848 AKNAQ7Z591 1439 aa16.79■□□□□ 0.28
POLR2J3-213ENST00000508848 MTUS2Q5JR59 1369 aa16.77■□□□□ 0.28
POLR2J3-213ENST00000508848 TIAM1Q13009 1591 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms