RNA–Protein interactions for RNA: ENST00000508838.5

AFP-204, Transcript of alpha fetoprotein, humanhuman

TSL 2

Gene AFP, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-204ENST00000508838 SNAPC4Q5SXM2 1469 aa10.71□□□□□ -0.69
AFP-204ENST00000508838 ABCA5Q8WWZ7 1642 aa10.71□□□□□ -0.69
AFP-204ENST00000508838 U3KPZ7 1027 aaPredicted RBP10.71□□□□□ -0.69
AFP-204ENST00000508838 FGD5Q6ZNL6 1462 aa10.69□□□□□ -0.7
AFP-204ENST00000508838 ERCC6L2Q5T890 1561 aa10.67□□□□□ -0.7
AFP-204ENST00000508838 HAX1O00165 279 aa10.66□□□□□ -0.7
AFP-204ENST00000508838 SYNJ1O43426 1573 aa10.65□□□□□ -0.7
AFP-204ENST00000508838 MAGI1Q96QZ7 1491 aaPredicted RBP10.64□□□□□ -0.71
AFP-204ENST00000508838 KIF13AQ9H1H9 1805 aa10.64□□□□□ -0.71
AFP-204ENST00000508838 ABCB7O75027 752 aa10.63□□□□□ -0.71
AFP-204ENST00000508838 SHROOM2Q13796 1616 aa10.62□□□□□ -0.71
AFP-204ENST00000508838 ADAMTS12P58397 1594 aa10.62□□□□□ -0.71
AFP-204ENST00000508838 CEP170Q5SW79 1584 aa10.6□□□□□ -0.71
AFP-204ENST00000508838 TDRD9Q8NDG6 1382 aaKnown RBP10.6□□□□□ -0.71
AFP-204ENST00000508838 SYNJ2O15056 1496 aa10.6□□□□□ -0.71
AFP-204ENST00000508838 CYB5RLQ6IPT4 315 aa10.58□□□□□ -0.72
AFP-204ENST00000508838 BIVM-ERCC5R4GMW8 1640 aa10.58□□□□□ -0.72
AFP-204ENST00000508838 SOGA1O94964 1423 aa10.58□□□□□ -0.72
AFP-204ENST00000508838 GRIN2BQ13224 1484 aa10.57□□□□□ -0.72
AFP-204ENST00000508838 TRHP20396 242 aaPredicted RBP10.56□□□□□ -0.72
AFP-204ENST00000508838 ABCA10Q8WWZ4 1543 aa10.56□□□□□ -0.72
AFP-204ENST00000508838 LHX8Q68G74 356 aa10.55□□□□□ -0.72
AFP-204ENST00000508838 GAPVD1Q14C86 1478 aa10.55□□□□□ -0.72
AFP-204ENST00000508838 GRIN2AQ12879 1464 aa10.51□□□□□ -0.73
AFP-204ENST00000508838 NUP160Q12769 1436 aa10.5□□□□□ -0.73
AFP-204ENST00000508838 RUSC2Q8N2Y8 1516 aa10.5□□□□□ -0.73
AFP-204ENST00000508838 TOP2BQ02880 1626 aa10.5□□□□□ -0.73
AFP-204ENST00000508838 ZNF219Q9P2Y4 722 aaPredicted RBP10.48□□□□□ -0.73
AFP-204ENST00000508838 FBLN2P98095 1184 aa10.45□□□□□ -0.74
AFP-204ENST00000508838 PIP4P2Q8N4L2 257 aa10.45□□□□□ -0.74
AFP-204ENST00000508838 DIP2BQ9P265 1576 aa10.43□□□□□ -0.74
AFP-204ENST00000508838 ADCY10Q96PN6 1610 aa10.43□□□□□ -0.74
AFP-204ENST00000508838 ERICH3Q5RHP9 1530 aa10.42□□□□□ -0.74
AFP-204ENST00000508838 PPRC1Q5VV67 1664 aaKnown RBP10.4□□□□□ -0.74
AFP-204ENST00000508838 APLP2Q06481 763 aa10.37□□□□□ -0.75
AFP-204ENST00000508838 CHMP7Q8WUX9 453 aaPredicted RBP10.37□□□□□ -0.75
AFP-204ENST00000508838 MAPKBP1O60336 1514 aa10.37□□□□□ -0.75
AFP-204ENST00000508838 FHAD1B1AJZ9 1412 aa10.35□□□□□ -0.75
AFP-204ENST00000508838 EVX2Q03828 476 aa10.35□□□□□ -0.75
AFP-204ENST00000508838 TSPOAP1O95153 1857 aa10.34□□□□□ -0.75
AFP-204ENST00000508838 WRNQ14191 1432 aaPredicted RBP eCLIP10.33□□□□□ -0.76
AFP-204ENST00000508838 ABCC10Q5T3U5 1492 aa10.3□□□□□ -0.76
AFP-204ENST00000508838 KDM6BO15054 1643 aa10.29□□□□□ -0.76
AFP-204ENST00000508838 CUL7Q14999 1698 aa10.29□□□□□ -0.76
AFP-204ENST00000508838 PRG4Q92954 1404 aaPredicted RBP10.29□□□□□ -0.76
AFP-204ENST00000508838 AKT1S1Q96B36 256 aa10.24□□□□□ -0.77
AFP-204ENST00000508838 ABCC2Q92887 1545 aa10.23□□□□□ -0.77
AFP-204ENST00000508838 MAP3K4Q9Y6R4 1608 aa10.22□□□□□ -0.77
AFP-204ENST00000508838 NCBP3Q53F19 620 aaKnown RBP10.22□□□□□ -0.77
AFP-204ENST00000508838 GLI2P10070 1586 aa10.19□□□□□ -0.78
AFP-204ENST00000508838 KIAA0586Q9BVV6 1533 aa10.19□□□□□ -0.78
AFP-204ENST00000508838 FXR2P51116 673 aaKnown RBP eCLIP10.18□□□□□ -0.78
AFP-204ENST00000508838 ZCCHC11Q5TAX3 1644 aaKnown RBP10.18□□□□□ -0.78
AFP-204ENST00000508838 IQGAP2Q13576 1575 aa10.17□□□□□ -0.78
AFP-204ENST00000508838 KDM4FA0A1W2PPD8 638 aa10.15□□□□□ -0.78
AFP-204ENST00000508838 DISP1Q96F81 1524 aa10.15□□□□□ -0.78
AFP-204ENST00000508838 COL17A1Q9UMD9 1497 aaPredicted RBP10.15□□□□□ -0.78
AFP-204ENST00000508838 REM2Q8IYK8 340 aaPredicted RBP10.14□□□□□ -0.79
AFP-204ENST00000508838 CTTNBP2Q8WZ74 1663 aa10.14□□□□□ -0.79
AFP-204ENST00000508838 KIAA0556O60303 1618 aa10.14□□□□□ -0.79
AFP-204ENST00000508838 JPH4Q96JJ6 628 aa10.13□□□□□ -0.79
AFP-204ENST00000508838 ADGRL1O94910 1474 aa10.12□□□□□ -0.79
AFP-204ENST00000508838 HECW2Q9P2P5 1572 aa10.12□□□□□ -0.79
AFP-204ENST00000508838 IGF1RP08069 1367 aa10.12□□□□□ -0.79
AFP-204ENST00000508838 UHRF1BP1LA0JNW5 1464 aa10.11□□□□□ -0.79
AFP-204ENST00000508838 UGGT2Q9NYU1 1516 aa10.1□□□□□ -0.79
AFP-204ENST00000508838 ASXL2Q76L83 1435 aa10.09□□□□□ -0.79
AFP-204ENST00000508838 KDM5BQ9UGL1 1544 aa10.09□□□□□ -0.79
AFP-204ENST00000508838 FAM69CQ0P6D2 419 aa10.09□□□□□ -0.79
AFP-204ENST00000508838 EPRSP07814 1512 aaKnown RBP10.08□□□□□ -0.8
AFP-204ENST00000508838 KIF21BO75037 1637 aa10.08□□□□□ -0.8
AFP-204ENST00000508838 GABBR2O75899 941 aa10.08□□□□□ -0.8
AFP-204ENST00000508838 SUPT5HO00267 1087 aaKnown RBP10.07□□□□□ -0.8
AFP-204ENST00000508838 CFAP43Q8NDM7 1665 aa10.06□□□□□ -0.8
AFP-204ENST00000508838 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.06□□□□□ -0.8
AFP-204ENST00000508838 HNRNPUL2Q1KMD3 747 aaKnown RBP10.06□□□□□ -0.8
AFP-204ENST00000508838 KIF27Q86VH2 1401 aa10.06□□□□□ -0.8
AFP-204ENST00000508838 ABCA8O94911 1581 aa10.05□□□□□ -0.8
AFP-204ENST00000508838 PLB1Q6P1J6 1458 aa10.04□□□□□ -0.8
AFP-204ENST00000508838 PITPNM1O00562 1244 aa10.03□□□□□ -0.8
AFP-204ENST00000508838 TNIKQ9UKE5 1360 aa10.02□□□□□ -0.8
AFP-204ENST00000508838 FRMPD1Q5SYB0 1578 aa10.02□□□□□ -0.81
AFP-204ENST00000508838 PTPRGP23470 1445 aa10.02□□□□□ -0.81
AFP-204ENST00000508838 UACAQ9BZF9 1416 aa10.01□□□□□ -0.81
AFP-204ENST00000508838 NPM3O75607 178 aaKnown RBP10.01□□□□□ -0.81
AFP-204ENST00000508838 SIGLEC1Q9BZZ2 1709 aa10.01□□□□□ -0.81
AFP-204ENST00000508838 POTEMA6NI47 508 aa10□□□□□ -0.81
AFP-204ENST00000508838 CARMIL1Q5VZK9 1371 aa10□□□□□ -0.81
AFP-204ENST00000508838 WDR7Q9Y4E6 1490 aa9.99□□□□□ -0.81
AFP-204ENST00000508838 POLA2Q14181 598 aa9.99□□□□□ -0.81
AFP-204ENST00000508838 ADAMTSL3P82987 1691 aa9.99□□□□□ -0.81
AFP-204ENST00000508838 ILDR1Q86SU0 546 aaPredicted RBP9.97□□□□□ -0.81
AFP-204ENST00000508838 ABCA9Q8IUA7 1624 aa9.96□□□□□ -0.81
AFP-204ENST00000508838 CARMIL2Q6F5E8 1435 aa9.96□□□□□ -0.82
AFP-204ENST00000508838 MAGI3Q5TCQ9 1506 aa9.96□□□□□ -0.82
AFP-204ENST00000508838 SAMD9Q5K651 1589 aa9.96□□□□□ -0.82
AFP-204ENST00000508838 TEX14Q8IWB6 1497 aa9.95□□□□□ -0.82
AFP-204ENST00000508838 RAPGEF2Q9Y4G8 1499 aa9.95□□□□□ -0.82
AFP-204ENST00000508838 BCORL1Q5H9F3 1711 aa9.93□□□□□ -0.82
AFP-204ENST00000508838 RICTORQ6R327 1708 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms