RNA–Protein interactions for RNA: ENST00000508717.1

TRIO-212, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 859 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-212ENST00000508717 DNAJC5Q9H3Z4 198 aa21.54■■□□□ 1.04
TRIO-212ENST00000508717 SHROOM2Q13796 1616 aa21.54■■□□□ 1.04
TRIO-212ENST00000508717 IQGAP2Q13576 1575 aa21.53■■□□□ 1.04
TRIO-212ENST00000508717 JPH4Q96JJ6 628 aa21.53■■□□□ 1.04
TRIO-212ENST00000508717 CTTNBP2Q8WZ74 1663 aa21.52■■□□□ 1.04
TRIO-212ENST00000508717 UGGT2Q9NYU1 1516 aa21.49■■□□□ 1.03
TRIO-212ENST00000508717 UBTFP17480 764 aaKnown RBP21.47■■□□□ 1.03
TRIO-212ENST00000508717 TNIKQ9UKE5 1360 aa21.47■■□□□ 1.03
TRIO-212ENST00000508717 PRG4Q92954 1404 aaPredicted RBP21.43■■□□□ 1.02
TRIO-212ENST00000508717 ARHGEF11O15085 1522 aa21.41■■□□□ 1.02
TRIO-212ENST00000508717 DISP1Q96F81 1524 aa21.39■■□□□ 1.01
TRIO-212ENST00000508717 CARMIL2Q6F5E8 1435 aa21.38■■□□□ 1.01
TRIO-212ENST00000508717 LOC105371045A0A1W2PR82 267 aa21.37■■□□□ 1.01
TRIO-212ENST00000508717 EHMT2Q96KQ7 1210 aa21.36■■□□□ 1.01
TRIO-212ENST00000508717 ERCC6L2Q5T890 1561 aa21.34■■□□□ 1.01
TRIO-212ENST00000508717 RIMBP3CA6NJZ7 1639 aa21.33■■□□□ 1.01
TRIO-212ENST00000508717 RIMBP3BA6NNM3 1639 aa21.33■■□□□ 1.01
TRIO-212ENST00000508717 RIMBP3Q9UFD9 1639 aa21.33■■□□□ 1.01
TRIO-212ENST00000508717 SAMD9Q5K651 1589 aa21.33■■□□□ 1.01
TRIO-212ENST00000508717 EFCAB5A4FU69 1503 aa21.32■■□□□ 1
TRIO-212ENST00000508717 KIAA0556O60303 1618 aa21.32■■□□□ 1
TRIO-212ENST00000508717 ARAP1Q96P48 1450 aa21.26■□□□□ 0.99
TRIO-212ENST00000508717 ARHGAP35Q9NRY4 1499 aa21.26■□□□□ 0.99
TRIO-212ENST00000508717 PTPRGP23470 1445 aa21.23■□□□□ 0.99
TRIO-212ENST00000508717 CLIP1P30622 1438 aa21.22■□□□□ 0.99
TRIO-212ENST00000508717 CEP162Q5TB80 1403 aa21.21■□□□□ 0.99
TRIO-212ENST00000508717 RANGAP1P46060 587 aaPredicted RBP21.17■□□□□ 0.98
TRIO-212ENST00000508717 FHOD3Q2V2M9 1422 aa21.16■□□□□ 0.98
TRIO-212ENST00000508717 P3H3Q8IVL6 736 aa21.16■□□□□ 0.98
TRIO-212ENST00000508717 CYB5RLQ6IPT4 315 aa21.15■□□□□ 0.98
TRIO-212ENST00000508717 UHRF1BP1LA0JNW5 1464 aa21.13■□□□□ 0.97
TRIO-212ENST00000508717 FMN1Q68DA7 1419 aa21.12■□□□□ 0.97
TRIO-212ENST00000508717 UACAQ9BZF9 1416 aa21.12■□□□□ 0.97
TRIO-212ENST00000508717 ABCA8O94911 1581 aa21.09■□□□□ 0.97
TRIO-212ENST00000508717 ABCC2Q92887 1545 aa21.07■□□□□ 0.96
TRIO-212ENST00000508717 PLB1Q6P1J6 1458 aa21.07■□□□□ 0.96
TRIO-212ENST00000508717 ADCY10Q96PN6 1610 aa21.04■□□□□ 0.96
TRIO-212ENST00000508717 TTBK1Q5TCY1 1321 aaPredicted RBP21.02■□□□□ 0.95
TRIO-212ENST00000508717 RAPGEF6Q8TEU7 1601 aa21.01■□□□□ 0.95
TRIO-212ENST00000508717 KDM5BQ9UGL1 1544 aa21■□□□□ 0.95
TRIO-212ENST00000508717 CASKIN1Q8WXD9 1431 aa21■□□□□ 0.95
TRIO-212ENST00000508717 NUP153P49790 1475 aaKnown RBP20.98■□□□□ 0.95
TRIO-212ENST00000508717 VPS8Q8N3P4 1428 aa20.97■□□□□ 0.95
TRIO-212ENST00000508717 FYCO1Q9BQS8 1478 aa20.95■□□□□ 0.94
TRIO-212ENST00000508717 ATP10BO94823 1461 aa20.93■□□□□ 0.94
TRIO-212ENST00000508717 HECW1Q76N89 1606 aa20.93■□□□□ 0.94
TRIO-212ENST00000508717 NPM1P06748 294 aaKnown RBP eCLIP20.92■□□□□ 0.94
TRIO-212ENST00000508717 PCF11O94913 1555 aaKnown RBP20.91■□□□□ 0.94
TRIO-212ENST00000508717 MAPKBP1O60336 1514 aa20.89■□□□□ 0.94
TRIO-212ENST00000508717 EPRSP07814 1512 aaKnown RBP20.88■□□□□ 0.93
TRIO-212ENST00000508717 ZCCHC11Q5TAX3 1644 aaKnown RBP20.87■□□□□ 0.93
TRIO-212ENST00000508717 CCDC18Q5T9S5 1454 aa20.87■□□□□ 0.93
TRIO-212ENST00000508717 ASXL2Q76L83 1435 aa20.81■□□□□ 0.92
TRIO-212ENST00000508717 MAP3K1Q13233 1512 aa20.81■□□□□ 0.92
TRIO-212ENST00000508717 CDK13Q14004 1512 aaKnown RBP20.8■□□□□ 0.92
TRIO-212ENST00000508717 ATP1B4Q9UN42 357 aaPredicted RBP20.8■□□□□ 0.92
TRIO-212ENST00000508717 LRRIQ1Q96JM4 1722 aa20.8■□□□□ 0.92
TRIO-212ENST00000508717 CDK11AQ9UQ88 783 aaPredicted RBP20.79■□□□□ 0.92
TRIO-212ENST00000508717 WDR7Q9Y4E6 1490 aa20.78■□□□□ 0.92
TRIO-212ENST00000508717 PLEKHD1A6NEE1 506 aa20.77■□□□□ 0.92
TRIO-212ENST00000508717 ARID3CA6NKF2 412 aa20.76■□□□□ 0.91
TRIO-212ENST00000508717 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.75■□□□□ 0.91
TRIO-212ENST00000508717 HNRNPUL2Q1KMD3 747 aaKnown RBP20.75■□□□□ 0.91
TRIO-212ENST00000508717 ABCC10Q5T3U5 1492 aa20.74■□□□□ 0.91
TRIO-212ENST00000508717 TROQ12816 1431 aaPredicted RBP20.72■□□□□ 0.91
TRIO-212ENST00000508717 TIAM1Q13009 1591 aa20.72■□□□□ 0.91
TRIO-212ENST00000508717 CFAP43Q8NDM7 1665 aa20.7■□□□□ 0.91
TRIO-212ENST00000508717 GLI2P10070 1586 aa20.7■□□□□ 0.9
TRIO-212ENST00000508717 MAGI3Q5TCQ9 1506 aa20.68■□□□□ 0.9
TRIO-212ENST00000508717 DIP2BQ9P265 1576 aa20.68■□□□□ 0.9
TRIO-212ENST00000508717 APLP2Q06481 763 aa20.66■□□□□ 0.9
TRIO-212ENST00000508717 LRRC9Q6ZRR7 1453 aa20.65■□□□□ 0.9
TRIO-212ENST00000508717 EHBP1L1Q8N3D4 1523 aa20.64■□□□□ 0.9
TRIO-212ENST00000508717 MTUS2Q5JR59 1369 aa20.64■□□□□ 0.89
TRIO-212ENST00000508717 FAM69CQ0P6D2 419 aa20.62■□□□□ 0.89
TRIO-212ENST00000508717 KCNH8Q96L42 1107 aa20.62■□□□□ 0.89
TRIO-212ENST00000508717 ABCA9Q8IUA7 1624 aa20.61■□□□□ 0.89
TRIO-212ENST00000508717 KANK4Q5T7N3 995 aaPredicted RBP20.61■□□□□ 0.89
TRIO-212ENST00000508717 KIF13AQ9H1H9 1805 aa20.61■□□□□ 0.89
TRIO-212ENST00000508717 KIF14Q15058 1648 aa20.59■□□□□ 0.89
TRIO-212ENST00000508717 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.58■□□□□ 0.89
TRIO-212ENST00000508717 MAP3K4Q9Y6R4 1608 aa20.56■□□□□ 0.88
TRIO-212ENST00000508717 TRHP20396 242 aaPredicted RBP20.55■□□□□ 0.88
TRIO-212ENST00000508717 CD109Q6YHK3 1445 aa20.54■□□□□ 0.88
TRIO-212ENST00000508717 ARAP3Q8WWN8 1544 aa20.53■□□□□ 0.88
TRIO-212ENST00000508717 TTC37Q6PGP7 1564 aa20.52■□□□□ 0.88
TRIO-212ENST00000508717 SUPT6HQ7KZ85 1726 aaKnown RBP20.52■□□□□ 0.88
TRIO-212ENST00000508717 PLCH2O75038 1416 aa20.52■□□□□ 0.87
TRIO-212ENST00000508717 NCOA2Q15596 1464 aa20.51■□□□□ 0.87
TRIO-212ENST00000508717 GPATCH8Q9UKJ3 1502 aaKnown RBP20.48■□□□□ 0.87
TRIO-212ENST00000508717 PHLDB1Q86UU1 1377 aa20.46■□□□□ 0.87
TRIO-212ENST00000508717 PPRC1Q5VV67 1664 aaKnown RBP20.46■□□□□ 0.87
TRIO-212ENST00000508717 TEX14Q8IWB6 1497 aa20.46■□□□□ 0.87
TRIO-212ENST00000508717 CCNB3Q8WWL7 1395 aa20.46■□□□□ 0.87
TRIO-212ENST00000508717 MYO5CQ9NQX4 1742 aa20.44■□□□□ 0.86
TRIO-212ENST00000508717 NEO1Q92859 1461 aa20.43■□□□□ 0.86
TRIO-212ENST00000508717 PREX2Q70Z35 1606 aa20.42■□□□□ 0.86
TRIO-212ENST00000508717 CDC42BPAQ5VT25 1732 aa20.42■□□□□ 0.86
TRIO-212ENST00000508717 EFCAB2Q5VUJ9 269 aa20.42■□□□□ 0.86
TRIO-212ENST00000508717 CDC42BPBQ9Y5S2 1711 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms