RNA–Protein interactions for RNA: ENST00000508642.1

SPOCK1-205, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 499 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-205ENST00000508642 NUP160Q12769 1436 aa11.88□□□□□ -0.51
SPOCK1-205ENST00000508642 FAM9AQ8IZU1 332 aaPredicted RBP11.87□□□□□ -0.51
SPOCK1-205ENST00000508642 OSCARQ8IYS5 282 aa11.86□□□□□ -0.51
SPOCK1-205ENST00000508642 SHROOM2Q13796 1616 aa11.86□□□□□ -0.51
SPOCK1-205ENST00000508642 IQGAP2Q13576 1575 aa11.84□□□□□ -0.51
SPOCK1-205ENST00000508642 GOLGA3Q08378 1498 aa11.82□□□□□ -0.52
SPOCK1-205ENST00000508642 KIAA0586Q9BVV6 1533 aa11.81□□□□□ -0.52
SPOCK1-205ENST00000508642 RIMBP3CA6NJZ7 1639 aa11.78□□□□□ -0.52
SPOCK1-205ENST00000508642 RIMBP3BA6NNM3 1639 aa11.78□□□□□ -0.52
SPOCK1-205ENST00000508642 RIMBP3Q9UFD9 1639 aa11.78□□□□□ -0.52
SPOCK1-205ENST00000508642 UGGT2Q9NYU1 1516 aa11.76□□□□□ -0.53
SPOCK1-205ENST00000508642 ARHGEF11O15085 1522 aa11.75□□□□□ -0.53
SPOCK1-205ENST00000508642 ERCC6L2Q5T890 1561 aa11.73□□□□□ -0.53
SPOCK1-205ENST00000508642 SAMD9Q5K651 1589 aa11.72□□□□□ -0.53
SPOCK1-205ENST00000508642 KIAA0556O60303 1618 aa11.71□□□□□ -0.53
SPOCK1-205ENST00000508642 PRG4Q92954 1404 aaPredicted RBP11.7□□□□□ -0.54
SPOCK1-205ENST00000508642 JPH4Q96JJ6 628 aa11.7□□□□□ -0.54
SPOCK1-205ENST00000508642 DISP1Q96F81 1524 aa11.7□□□□□ -0.54
SPOCK1-205ENST00000508642 UBTFP17480 764 aaKnown RBP11.69□□□□□ -0.54
SPOCK1-205ENST00000508642 EHMT2Q96KQ7 1210 aa11.69□□□□□ -0.54
SPOCK1-205ENST00000508642 EFCAB5A4FU69 1503 aa11.69□□□□□ -0.54
SPOCK1-205ENST00000508642 CARMIL2Q6F5E8 1435 aa11.67□□□□□ -0.54
SPOCK1-205ENST00000508642 TNIKQ9UKE5 1360 aa11.67□□□□□ -0.54
SPOCK1-205ENST00000508642 ARAP1Q96P48 1450 aa11.65□□□□□ -0.54
SPOCK1-205ENST00000508642 LOC105371045A0A1W2PR82 267 aa11.62□□□□□ -0.55
SPOCK1-205ENST00000508642 ARHGAP35Q9NRY4 1499 aa11.61□□□□□ -0.55
SPOCK1-205ENST00000508642 ADCY10Q96PN6 1610 aa11.59□□□□□ -0.55
SPOCK1-205ENST00000508642 CEP162Q5TB80 1403 aa11.59□□□□□ -0.55
SPOCK1-205ENST00000508642 CLIP1P30622 1438 aa11.58□□□□□ -0.56
SPOCK1-205ENST00000508642 RAPGEF6Q8TEU7 1601 aa11.57□□□□□ -0.56
SPOCK1-205ENST00000508642 RANGAP1P46060 587 aaPredicted RBP11.57□□□□□ -0.56
SPOCK1-205ENST00000508642 PTPRGP23470 1445 aa11.57□□□□□ -0.56
SPOCK1-205ENST00000508642 FHOD3Q2V2M9 1422 aa11.57□□□□□ -0.56
SPOCK1-205ENST00000508642 ABCA8O94911 1581 aa11.57□□□□□ -0.56
SPOCK1-205ENST00000508642 LRRIQ1Q96JM4 1722 aa11.56□□□□□ -0.56
SPOCK1-205ENST00000508642 ABCC2Q92887 1545 aa11.55□□□□□ -0.56
SPOCK1-205ENST00000508642 CYB5RLQ6IPT4 315 aa11.54□□□□□ -0.56
SPOCK1-205ENST00000508642 P3H3Q8IVL6 736 aa11.54□□□□□ -0.56
SPOCK1-205ENST00000508642 UHRF1BP1LA0JNW5 1464 aa11.53□□□□□ -0.56
SPOCK1-205ENST00000508642 ZCCHC11Q5TAX3 1644 aaKnown RBP11.53□□□□□ -0.56
SPOCK1-205ENST00000508642 FMN1Q68DA7 1419 aa11.52□□□□□ -0.56
SPOCK1-205ENST00000508642 PLB1Q6P1J6 1458 aa11.52□□□□□ -0.56
SPOCK1-205ENST00000508642 PCF11O94913 1555 aaKnown RBP11.52□□□□□ -0.57
SPOCK1-205ENST00000508642 UACAQ9BZF9 1416 aa11.52□□□□□ -0.57
SPOCK1-205ENST00000508642 HECW1Q76N89 1606 aa11.51□□□□□ -0.57
SPOCK1-205ENST00000508642 TTBK1Q5TCY1 1321 aaPredicted RBP11.51□□□□□ -0.57
SPOCK1-205ENST00000508642 KDM5BQ9UGL1 1544 aa11.48□□□□□ -0.57
SPOCK1-205ENST00000508642 NUP153P49790 1475 aaKnown RBP11.47□□□□□ -0.57
SPOCK1-205ENST00000508642 FYCO1Q9BQS8 1478 aa11.47□□□□□ -0.57
SPOCK1-205ENST00000508642 KIF13AQ9H1H9 1805 aa11.46□□□□□ -0.58
SPOCK1-205ENST00000508642 MAPKBP1O60336 1514 aa11.45□□□□□ -0.58
SPOCK1-205ENST00000508642 CASKIN1Q8WXD9 1431 aa11.45□□□□□ -0.58
SPOCK1-205ENST00000508642 CFAP43Q8NDM7 1665 aa11.45□□□□□ -0.58
SPOCK1-205ENST00000508642 VPS8Q8N3P4 1428 aa11.43□□□□□ -0.58
SPOCK1-205ENST00000508642 EPRSP07814 1512 aaKnown RBP11.42□□□□□ -0.58
SPOCK1-205ENST00000508642 CDK13Q14004 1512 aaKnown RBP11.42□□□□□ -0.58
SPOCK1-205ENST00000508642 ATP10BO94823 1461 aa11.42□□□□□ -0.58
SPOCK1-205ENST00000508642 CCDC18Q5T9S5 1454 aa11.42□□□□□ -0.58
SPOCK1-205ENST00000508642 NPM1P06748 294 aaKnown RBP eCLIP11.4□□□□□ -0.58
SPOCK1-205ENST00000508642 TIAM1Q13009 1591 aa11.38□□□□□ -0.59
SPOCK1-205ENST00000508642 DIP2BQ9P265 1576 aa11.38□□□□□ -0.59
SPOCK1-205ENST00000508642 ASXL2Q76L83 1435 aa11.37□□□□□ -0.59
SPOCK1-205ENST00000508642 WDR7Q9Y4E6 1490 aa11.37□□□□□ -0.59
SPOCK1-205ENST00000508642 TSPOAP1O95153 1857 aa11.36□□□□□ -0.59
SPOCK1-205ENST00000508642 ATP1B4Q9UN42 357 aaPredicted RBP11.36□□□□□ -0.59
SPOCK1-205ENST00000508642 MAP3K1Q13233 1512 aa11.35□□□□□ -0.59
SPOCK1-205ENST00000508642 ARID3CA6NKF2 412 aa11.35□□□□□ -0.59
SPOCK1-205ENST00000508642 FOXD1Q16676 465 aa11.35□□□□□ -0.59
SPOCK1-205ENST00000508642 GLI2P10070 1586 aa11.35□□□□□ -0.59
SPOCK1-205ENST00000508642 MAP3K4Q9Y6R4 1608 aa11.35□□□□□ -0.59
SPOCK1-205ENST00000508642 MYO5CQ9NQX4 1742 aa11.34□□□□□ -0.59
SPOCK1-205ENST00000508642 KIF14Q15058 1648 aa11.34□□□□□ -0.59
SPOCK1-205ENST00000508642 ABCA9Q8IUA7 1624 aa11.34□□□□□ -0.59
SPOCK1-205ENST00000508642 MAGI3Q5TCQ9 1506 aa11.34□□□□□ -0.59
SPOCK1-205ENST00000508642 ABCC10Q5T3U5 1492 aa11.33□□□□□ -0.6
SPOCK1-205ENST00000508642 SUPT6HQ7KZ85 1726 aaKnown RBP11.32□□□□□ -0.6
SPOCK1-205ENST00000508642 EHBP1L1Q8N3D4 1523 aa11.32□□□□□ -0.6
SPOCK1-205ENST00000508642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.32□□□□□ -0.6
SPOCK1-205ENST00000508642 HNRNPUL2Q1KMD3 747 aaKnown RBP11.32□□□□□ -0.6
SPOCK1-205ENST00000508642 CDC42BPAQ5VT25 1732 aa11.32□□□□□ -0.6
SPOCK1-205ENST00000508642 PPRC1Q5VV67 1664 aaKnown RBP11.31□□□□□ -0.6
SPOCK1-205ENST00000508642 TTC37Q6PGP7 1564 aa11.31□□□□□ -0.6
SPOCK1-205ENST00000508642 TROQ12816 1431 aaPredicted RBP11.3□□□□□ -0.6
SPOCK1-205ENST00000508642 CDK11AQ9UQ88 783 aaPredicted RBP11.3□□□□□ -0.6
SPOCK1-205ENST00000508642 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.3□□□□□ -0.6
SPOCK1-205ENST00000508642 CDC42BPBQ9Y5S2 1711 aa11.29□□□□□ -0.6
SPOCK1-205ENST00000508642 PLEKHD1A6NEE1 506 aa11.29□□□□□ -0.6
SPOCK1-205ENST00000508642 ITSN2Q9NZM3 1697 aa11.29□□□□□ -0.6
SPOCK1-205ENST00000508642 LRRC9Q6ZRR7 1453 aa11.28□□□□□ -0.6
SPOCK1-205ENST00000508642 PREX2Q70Z35 1606 aa11.27□□□□□ -0.6
SPOCK1-205ENST00000508642 CFAP74Q9C0B2 1584 aa11.26□□□□□ -0.61
SPOCK1-205ENST00000508642 MTUS2Q5JR59 1369 aa11.26□□□□□ -0.61
SPOCK1-205ENST00000508642 APLP2Q06481 763 aa11.25□□□□□ -0.61
SPOCK1-205ENST00000508642 KCNH8Q96L42 1107 aa11.25□□□□□ -0.61
SPOCK1-205ENST00000508642 FAM69CQ0P6D2 419 aa11.24□□□□□ -0.61
SPOCK1-205ENST00000508642 TRHP20396 242 aaPredicted RBP11.23□□□□□ -0.61
SPOCK1-205ENST00000508642 ARAP3Q8WWN8 1544 aa11.23□□□□□ -0.61
SPOCK1-205ENST00000508642 NCOA2Q15596 1464 aa11.21□□□□□ -0.61
SPOCK1-205ENST00000508642 CD109Q6YHK3 1445 aa11.21□□□□□ -0.61
SPOCK1-205ENST00000508642 KANK4Q5T7N3 995 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms