RNA–Protein interactions for RNA: ENST00000508619.1

LINC02171-201, Transcript of long intergenic non-protein coding RNA 2171, humanhuman

TSL 1 (best) BASIC

Gene LINC02171, Length 1,033 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02171-201ENST00000508619 KIAA0586Q9BVV6 1533 aa23.3■■□□□ 1.32
LINC02171-201ENST00000508619 PRG4Q92954 1404 aaPredicted RBP23.3■■□□□ 1.32
LINC02171-201ENST00000508619 TRHP20396 242 aaPredicted RBP23.28■■□□□ 1.32
LINC02171-201ENST00000508619 CARMIL1Q5VZK9 1371 aa23.27■■□□□ 1.32
LINC02171-201ENST00000508619 RAPGEF2Q9Y4G8 1499 aa23.11■■□□□ 1.29
LINC02171-201ENST00000508619 IQGAP2Q13576 1575 aa23.08■■□□□ 1.29
LINC02171-201ENST00000508619 CARMIL2Q6F5E8 1435 aa23.05■■□□□ 1.28
LINC02171-201ENST00000508619 MAPKBP1O60336 1514 aa23.02■■□□□ 1.28
LINC02171-201ENST00000508619 ADCY10Q96PN6 1610 aa23■■□□□ 1.27
LINC02171-201ENST00000508619 TNIKQ9UKE5 1360 aa23■■□□□ 1.27
LINC02171-201ENST00000508619 PTPRGP23470 1445 aa22.99■■□□□ 1.27
LINC02171-201ENST00000508619 UGGT2Q9NYU1 1516 aa22.98■■□□□ 1.27
LINC02171-201ENST00000508619 NPM1P06748 294 aaKnown RBP eCLIP22.97■■□□□ 1.27
LINC02171-201ENST00000508619 PRXQ9BXM0 1461 aa22.96■■□□□ 1.27
LINC02171-201ENST00000508619 DISP1Q96F81 1524 aa22.95■■□□□ 1.26
LINC02171-201ENST00000508619 ABCC10Q5T3U5 1492 aa22.93■■□□□ 1.26
LINC02171-201ENST00000508619 KIF13AQ9H1H9 1805 aa22.92■■□□□ 1.26
LINC02171-201ENST00000508619 UHRF1BP1LA0JNW5 1464 aa22.91■■□□□ 1.26
LINC02171-201ENST00000508619 ABCC2Q92887 1545 aa22.87■■□□□ 1.25
LINC02171-201ENST00000508619 CTTNBP2Q8WZ74 1663 aa22.86■■□□□ 1.25
LINC02171-201ENST00000508619 KIAA0556O60303 1618 aa22.86■■□□□ 1.25
LINC02171-201ENST00000508619 DIP2BQ9P265 1576 aa22.85■■□□□ 1.25
LINC02171-201ENST00000508619 EEA1Q15075 1411 aa22.85■■□□□ 1.25
LINC02171-201ENST00000508619 UACAQ9BZF9 1416 aa22.85■■□□□ 1.25
LINC02171-201ENST00000508619 GOLGA3Q08378 1498 aa22.82■■□□□ 1.24
LINC02171-201ENST00000508619 FAM69CQ0P6D2 419 aa22.81■■□□□ 1.24
LINC02171-201ENST00000508619 CSRNP3Q8WYN3 585 aa22.79■■□□□ 1.24
LINC02171-201ENST00000508619 KDM5BQ9UGL1 1544 aa22.77■■□□□ 1.24
LINC02171-201ENST00000508619 PLB1Q6P1J6 1458 aa22.77■■□□□ 1.24
LINC02171-201ENST00000508619 ASXL2Q76L83 1435 aa22.73■■□□□ 1.23
LINC02171-201ENST00000508619 TTBK1Q5TCY1 1321 aaPredicted RBP22.72■■□□□ 1.23
LINC02171-201ENST00000508619 GLI2P10070 1586 aa22.71■■□□□ 1.23
LINC02171-201ENST00000508619 ABCA8O94911 1581 aa22.65■■□□□ 1.22
LINC02171-201ENST00000508619 ZCCHC11Q5TAX3 1644 aaKnown RBP22.64■■□□□ 1.22
LINC02171-201ENST00000508619 EPRSP07814 1512 aaKnown RBP22.61■■□□□ 1.21
LINC02171-201ENST00000508619 SAMD9Q5K651 1589 aa22.6■■□□□ 1.21
LINC02171-201ENST00000508619 FAM9AQ8IZU1 332 aaPredicted RBP22.58■■□□□ 1.21
LINC02171-201ENST00000508619 WDR7Q9Y4E6 1490 aa22.58■■□□□ 1.2
LINC02171-201ENST00000508619 KIF21BO75037 1637 aa22.57■■□□□ 1.2
LINC02171-201ENST00000508619 KDM6BO15054 1643 aa22.55■■□□□ 1.2
LINC02171-201ENST00000508619 TSPOAP1O95153 1857 aa22.55■■□□□ 1.2
LINC02171-201ENST00000508619 CHIC1Q5VXU3 224 aa22.54■■□□□ 1.2
LINC02171-201ENST00000508619 MAP3K4Q9Y6R4 1608 aa22.53■■□□□ 1.2
LINC02171-201ENST00000508619 PPRC1Q5VV67 1664 aaKnown RBP22.53■■□□□ 1.2
LINC02171-201ENST00000508619 TEX14Q8IWB6 1497 aa22.5■■□□□ 1.19
LINC02171-201ENST00000508619 EFCAB5A4FU69 1503 aa22.46■■□□□ 1.19
LINC02171-201ENST00000508619 ATP10BO94823 1461 aa22.44■■□□□ 1.18
LINC02171-201ENST00000508619 P3H3Q8IVL6 736 aa22.44■■□□□ 1.18
LINC02171-201ENST00000508619 MAGI3Q5TCQ9 1506 aa22.43■■□□□ 1.18
LINC02171-201ENST00000508619 CFAP43Q8NDM7 1665 aa22.42■■□□□ 1.18
LINC02171-201ENST00000508619 RAPGEF6Q8TEU7 1601 aa22.42■■□□□ 1.18
LINC02171-201ENST00000508619 AEBP2Q6ZN18 517 aaPredicted RBP22.41■■□□□ 1.18
LINC02171-201ENST00000508619 CD109Q6YHK3 1445 aa22.39■■□□□ 1.17
LINC02171-201ENST00000508619 FHOD3Q2V2M9 1422 aa22.38■■□□□ 1.17
LINC02171-201ENST00000508619 NUP153P49790 1475 aaKnown RBP22.35■■□□□ 1.17
LINC02171-201ENST00000508619 COL17A1Q9UMD9 1497 aaPredicted RBP22.35■■□□□ 1.17
LINC02171-201ENST00000508619 KCNH8Q96L42 1107 aa22.33■■□□□ 1.17
LINC02171-201ENST00000508619 ABCA9Q8IUA7 1624 aa22.3■■□□□ 1.16
LINC02171-201ENST00000508619 PHLDB1Q86UU1 1377 aa22.29■■□□□ 1.16
LINC02171-201ENST00000508619 UBTFP17480 764 aaKnown RBP22.28■■□□□ 1.16
LINC02171-201ENST00000508619 RANGAP1P46060 587 aaPredicted RBP22.26■■□□□ 1.15
LINC02171-201ENST00000508619 ARID3CA6NKF2 412 aa22.25■■□□□ 1.15
LINC02171-201ENST00000508619 FMN1Q68DA7 1419 aa22.24■■□□□ 1.15
LINC02171-201ENST00000508619 ARAP3Q8WWN8 1544 aa22.24■■□□□ 1.15
LINC02171-201ENST00000508619 ARHGAP35Q9NRY4 1499 aa22.22■■□□□ 1.15
LINC02171-201ENST00000508619 PLEKHD1A6NEE1 506 aa22.21■■□□□ 1.15
LINC02171-201ENST00000508619 NEO1Q92859 1461 aa22.21■■□□□ 1.15
LINC02171-201ENST00000508619 KDM4FA0A1W2PPD8 638 aa22.2■■□□□ 1.14
LINC02171-201ENST00000508619 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.2■■□□□ 1.14
LINC02171-201ENST00000508619 HNRNPUL2Q1KMD3 747 aaKnown RBP22.2■■□□□ 1.14
LINC02171-201ENST00000508619 HECW1Q76N89 1606 aa22.15■■□□□ 1.14
LINC02171-201ENST00000508619 CDK13Q14004 1512 aaKnown RBP22.11■■□□□ 1.13
LINC02171-201ENST00000508619 ADGRL1O94910 1474 aa22.1■■□□□ 1.13
LINC02171-201ENST00000508619 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.1■■□□□ 1.13
LINC02171-201ENST00000508619 EHMT2Q96KQ7 1210 aa22.09■■□□□ 1.13
LINC02171-201ENST00000508619 CDK11AQ9UQ88 783 aaPredicted RBP22.07■■□□□ 1.12
LINC02171-201ENST00000508619 CFAP74Q9C0B2 1584 aa22.07■■□□□ 1.12
LINC02171-201ENST00000508619 TTC37Q6PGP7 1564 aa22.04■■□□□ 1.12
LINC02171-201ENST00000508619 FANCAO15360 1455 aa22.03■■□□□ 1.12
LINC02171-201ENST00000508619 CASKIN1Q8WXD9 1431 aa22.02■■□□□ 1.12
LINC02171-201ENST00000508619 AKNAQ7Z591 1439 aa22.01■■□□□ 1.11
LINC02171-201ENST00000508619 FRMPD1Q5SYB0 1578 aa22■■□□□ 1.11
LINC02171-201ENST00000508619 PLCH2O75038 1416 aa22■■□□□ 1.11
LINC02171-201ENST00000508619 TROQ12816 1431 aaPredicted RBP22■■□□□ 1.11
LINC02171-201ENST00000508619 DENND4BO75064 1496 aaPredicted RBP22■■□□□ 1.11
LINC02171-201ENST00000508619 CCDC18Q5T9S5 1454 aa21.99■■□□□ 1.11
LINC02171-201ENST00000508619 RAPGEF3O95398 923 aa21.98■■□□□ 1.11
LINC02171-201ENST00000508619 CLIP1P30622 1438 aa21.97■■□□□ 1.11
LINC02171-201ENST00000508619 ATP1B4Q9UN42 357 aaPredicted RBP21.96■■□□□ 1.11
LINC02171-201ENST00000508619 FYCO1Q9BQS8 1478 aa21.96■■□□□ 1.11
LINC02171-201ENST00000508619 KIF14Q15058 1648 aa21.95■■□□□ 1.1
LINC02171-201ENST00000508619 RICTORQ6R327 1708 aa21.95■■□□□ 1.1
LINC02171-201ENST00000508619 ZMYM4Q5VZL5 1548 aa21.94■■□□□ 1.1
LINC02171-201ENST00000508619 PCF11O94913 1555 aaKnown RBP21.94■■□□□ 1.1
LINC02171-201ENST00000508619 LRRIQ1Q96JM4 1722 aa21.92■■□□□ 1.1
LINC02171-201ENST00000508619 MAGI2Q86UL8 1455 aa21.92■■□□□ 1.1
LINC02171-201ENST00000508619 ARHGEF40Q8TER5 1519 aa21.91■■□□□ 1.1
LINC02171-201ENST00000508619 MYO5CQ9NQX4 1742 aa21.91■■□□□ 1.1
LINC02171-201ENST00000508619 EFCAB2Q5VUJ9 269 aa21.9■■□□□ 1.1
LINC02171-201ENST00000508619 POGZQ7Z3K3 1410 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms