RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 CUL7Q14999 1698 aa28.26■■■□□ 2.11
LMNA-222ENST00000508500 PRG4Q92954 1404 aaPredicted RBP28.23■■■□□ 2.11
LMNA-222ENST00000508500 JPH4Q96JJ6 628 aa28.21■■■□□ 2.11
LMNA-222ENST00000508500 KIAA0586Q9BVV6 1533 aa28.11■■■□□ 2.09
LMNA-222ENST00000508500 CARMIL1Q5VZK9 1371 aa28.09■■■□□ 2.09
LMNA-222ENST00000508500 ADCY10Q96PN6 1610 aa28.06■■■□□ 2.08
LMNA-222ENST00000508500 MAPKBP1O60336 1514 aa28.03■■■□□ 2.08
LMNA-222ENST00000508500 ABCC10Q5T3U5 1492 aa27.98■■■□□ 2.07
LMNA-222ENST00000508500 DIP2BQ9P265 1576 aa27.96■■■□□ 2.07
LMNA-222ENST00000508500 IQGAP2Q13576 1575 aa27.9■■■□□ 2.06
LMNA-222ENST00000508500 AEBP2Q6ZN18 517 aaPredicted RBP27.87■■■□□ 2.05
LMNA-222ENST00000508500 RAPGEF2Q9Y4G8 1499 aa27.86■■■□□ 2.05
LMNA-222ENST00000508500 FAM69CQ0P6D2 419 aa27.81■■■□□ 2.04
LMNA-222ENST00000508500 DISP1Q96F81 1524 aa27.78■■■□□ 2.04
LMNA-222ENST00000508500 PTPRGP23470 1445 aa27.78■■■□□ 2.04
LMNA-222ENST00000508500 NPM1P06748 294 aaKnown RBP eCLIP27.77■■■□□ 2.04
LMNA-222ENST00000508500 CARMIL2Q6F5E8 1435 aa27.75■■■□□ 2.03
LMNA-222ENST00000508500 TNIKQ9UKE5 1360 aa27.75■■■□□ 2.03
LMNA-222ENST00000508500 CTTNBP2Q8WZ74 1663 aa27.75■■■□□ 2.03
LMNA-222ENST00000508500 UGGT2Q9NYU1 1516 aa27.74■■■□□ 2.03
LMNA-222ENST00000508500 TTBK1Q5TCY1 1321 aaPredicted RBP27.72■■■□□ 2.03
LMNA-222ENST00000508500 TSPOAP1O95153 1857 aa27.72■■■□□ 2.03
LMNA-222ENST00000508500 ABCC2Q92887 1545 aa27.7■■■□□ 2.02
LMNA-222ENST00000508500 KDM6BO15054 1643 aa27.68■■■□□ 2.02
LMNA-222ENST00000508500 PRXQ9BXM0 1461 aa27.68■■■□□ 2.02
LMNA-222ENST00000508500 KIAA0556O60303 1618 aa27.67■■■□□ 2.02
LMNA-222ENST00000508500 UHRF1BP1LA0JNW5 1464 aa27.67■■■□□ 2.02
LMNA-222ENST00000508500 PPRC1Q5VV67 1664 aaKnown RBP27.66■■■□□ 2.02
LMNA-222ENST00000508500 GLI2P10070 1586 aa27.62■■■□□ 2.01
LMNA-222ENST00000508500 UACAQ9BZF9 1416 aa27.59■■■□□ 2.01
LMNA-222ENST00000508500 ASXL2Q76L83 1435 aa27.58■■■□□ 2.01
LMNA-222ENST00000508500 PLB1Q6P1J6 1458 aa27.56■■■□□ 2
LMNA-222ENST00000508500 KDM5BQ9UGL1 1544 aa27.55■■■□□ 2
LMNA-222ENST00000508500 ZCCHC11Q5TAX3 1644 aaKnown RBP27.5■■□□□ 1.99
LMNA-222ENST00000508500 MAP3K4Q9Y6R4 1608 aa27.49■■□□□ 1.99
LMNA-222ENST00000508500 KDM4FA0A1W2PPD8 638 aa27.47■■□□□ 1.99
LMNA-222ENST00000508500 CSRNP3Q8WYN3 585 aa27.46■■□□□ 1.99
LMNA-222ENST00000508500 EPRSP07814 1512 aaKnown RBP27.45■■□□□ 1.98
LMNA-222ENST00000508500 GOLGA3Q08378 1498 aa27.44■■□□□ 1.98
LMNA-222ENST00000508500 ABCA8O94911 1581 aa27.41■■□□□ 1.98
LMNA-222ENST00000508500 COL17A1Q9UMD9 1497 aaPredicted RBP27.39■■□□□ 1.98
LMNA-222ENST00000508500 EEA1Q15075 1411 aa27.35■■□□□ 1.97
LMNA-222ENST00000508500 SAMD9Q5K651 1589 aa27.33■■□□□ 1.97
LMNA-222ENST00000508500 WDR7Q9Y4E6 1490 aa27.3■■□□□ 1.96
LMNA-222ENST00000508500 P3H3Q8IVL6 736 aa27.29■■□□□ 1.96
LMNA-222ENST00000508500 FAM9AQ8IZU1 332 aaPredicted RBP27.28■■□□□ 1.96
LMNA-222ENST00000508500 TEX14Q8IWB6 1497 aa27.27■■□□□ 1.96
LMNA-222ENST00000508500 CFAP43Q8NDM7 1665 aa27.23■■□□□ 1.95
LMNA-222ENST00000508500 KIF21BO75037 1637 aa27.23■■□□□ 1.95
LMNA-222ENST00000508500 ADGRL1O94910 1474 aa27.21■■□□□ 1.95
LMNA-222ENST00000508500 CHIC1Q5VXU3 224 aa27.2■■□□□ 1.94
LMNA-222ENST00000508500 MAGI3Q5TCQ9 1506 aa27.18■■□□□ 1.94
LMNA-222ENST00000508500 ATP10BO94823 1461 aa27.16■■□□□ 1.94
LMNA-222ENST00000508500 RAPGEF6Q8TEU7 1601 aa27.16■■□□□ 1.94
LMNA-222ENST00000508500 ARID3CA6NKF2 412 aa27.12■■□□□ 1.93
LMNA-222ENST00000508500 KCNH8Q96L42 1107 aa27.12■■□□□ 1.93
LMNA-222ENST00000508500 RANGAP1P46060 587 aaPredicted RBP27.11■■□□□ 1.93
LMNA-222ENST00000508500 FHOD3Q2V2M9 1422 aa27.09■■□□□ 1.93
LMNA-222ENST00000508500 CD109Q6YHK3 1445 aa27.09■■□□□ 1.93
LMNA-222ENST00000508500 NUP153P49790 1475 aaKnown RBP27.04■■□□□ 1.92
LMNA-222ENST00000508500 ABCA9Q8IUA7 1624 aa27.01■■□□□ 1.91
LMNA-222ENST00000508500 EFCAB5A4FU69 1503 aa27■■□□□ 1.91
LMNA-222ENST00000508500 ARAP3Q8WWN8 1544 aa26.99■■□□□ 1.91
LMNA-222ENST00000508500 EHMT2Q96KQ7 1210 aa26.98■■□□□ 1.91
LMNA-222ENST00000508500 HECW2Q9P2P5 1572 aa26.92■■□□□ 1.9
LMNA-222ENST00000508500 UBTFP17480 764 aaKnown RBP26.9■■□□□ 1.9
LMNA-222ENST00000508500 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.89■■□□□ 1.9
LMNA-222ENST00000508500 HNRNPUL2Q1KMD3 747 aaKnown RBP26.89■■□□□ 1.9
LMNA-222ENST00000508500 ARHGAP35Q9NRY4 1499 aa26.87■■□□□ 1.89
LMNA-222ENST00000508500 FRMPD1Q5SYB0 1578 aa26.83■■□□□ 1.89
LMNA-222ENST00000508500 PHLDB1Q86UU1 1377 aa26.83■■□□□ 1.88
LMNA-222ENST00000508500 CDK13Q14004 1512 aaKnown RBP26.81■■□□□ 1.88
LMNA-222ENST00000508500 NEO1Q92859 1461 aa26.81■■□□□ 1.88
LMNA-222ENST00000508500 ADAMTSL3P82987 1691 aa26.79■■□□□ 1.88
LMNA-222ENST00000508500 PLEKHD1A6NEE1 506 aa26.78■■□□□ 1.88
LMNA-222ENST00000508500 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.77■■□□□ 1.882e-6■□□□□ 8.3
LMNA-222ENST00000508500 LRRIQ1Q96JM4 1722 aa26.76■■□□□ 1.88
LMNA-222ENST00000508500 TTC37Q6PGP7 1564 aa26.75■■□□□ 1.87
LMNA-222ENST00000508500 HECW1Q76N89 1606 aa26.73■■□□□ 1.87
LMNA-222ENST00000508500 FMN1Q68DA7 1419 aa26.73■■□□□ 1.87
LMNA-222ENST00000508500 ILDR1Q86SU0 546 aaPredicted RBP26.72■■□□□ 1.87
LMNA-222ENST00000508500 RICTORQ6R327 1708 aa26.71■■□□□ 1.87
LMNA-222ENST00000508500 RAPGEF3O95398 923 aa26.69■■□□□ 1.86
LMNA-222ENST00000508500 BCORL1Q5H9F3 1711 aa26.68■■□□□ 1.86
LMNA-222ENST00000508500 ATP1B4Q9UN42 357 aaPredicted RBP26.64■■□□□ 1.86
LMNA-222ENST00000508500 PTPRMP28827 1452 aa26.63■■□□□ 1.85
LMNA-222ENST00000508500 ARHGEF40Q8TER5 1519 aa26.63■■□□□ 1.85
LMNA-222ENST00000508500 FANCAO15360 1455 aa26.62■■□□□ 1.85
LMNA-222ENST00000508500 AKNAQ7Z591 1439 aa26.62■■□□□ 1.85
LMNA-222ENST00000508500 CFAP74Q9C0B2 1584 aa26.62■■□□□ 1.85
LMNA-222ENST00000508500 KIF14Q15058 1648 aa26.6■■□□□ 1.85
LMNA-222ENST00000508500 MADDQ8WXG6 1647 aa26.59■■□□□ 1.85
LMNA-222ENST00000508500 SIGLEC1Q9BZZ2 1709 aa26.58■■□□□ 1.85
LMNA-222ENST00000508500 MYO5CQ9NQX4 1742 aa26.58■■□□□ 1.85
LMNA-222ENST00000508500 ZMYM4Q5VZL5 1548 aa26.58■■□□□ 1.85
LMNA-222ENST00000508500 PCF11O94913 1555 aaKnown RBP26.58■■□□□ 1.85
LMNA-222ENST00000508500 DENND4BO75064 1496 aaPredicted RBP26.56■■□□□ 1.84
LMNA-222ENST00000508500 PLCH2O75038 1416 aa26.56■■□□□ 1.84
LMNA-222ENST00000508500 TROQ12816 1431 aaPredicted RBP26.51■■□□□ 1.83
LMNA-222ENST00000508500 CASKIN1Q8WXD9 1431 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms