RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 SHROOM2Q13796 1616 aa16.91■□□□□ 0.3
HTT-204ENST00000508321 KIAA0586Q9BVV6 1533 aa16.91■□□□□ 0.3
HTT-204ENST00000508321 IQGAP2Q13576 1575 aa16.89■□□□□ 0.3
HTT-204ENST00000508321 FAM9AQ8IZU1 332 aaPredicted RBP16.88■□□□□ 0.29
HTT-204ENST00000508321 UGGT2Q9NYU1 1516 aa16.8■□□□□ 0.28
HTT-204ENST00000508321 RIMBP3CA6NJZ7 1639 aa16.79■□□□□ 0.28
HTT-204ENST00000508321 RIMBP3BA6NNM3 1639 aa16.79■□□□□ 0.28
HTT-204ENST00000508321 RIMBP3Q9UFD9 1639 aa16.79■□□□□ 0.28
HTT-204ENST00000508321 ARHGEF11O15085 1522 aa16.77■□□□□ 0.28
HTT-204ENST00000508321 EFCAB5A4FU69 1503 aa16.74■□□□□ 0.27
HTT-204ENST00000508321 KIAA0556O60303 1618 aa16.73■□□□□ 0.27
HTT-204ENST00000508321 SAMD9Q5K651 1589 aa16.72■□□□□ 0.27
HTT-204ENST00000508321 CARMIL2Q6F5E8 1435 aa16.72■□□□□ 0.27
HTT-204ENST00000508321 PRG4Q92954 1404 aaPredicted RBP16.71■□□□□ 0.27
HTT-204ENST00000508321 JPH4Q96JJ6 628 aa16.71■□□□□ 0.27
HTT-204ENST00000508321 TNIKQ9UKE5 1360 aa16.7■□□□□ 0.26
HTT-204ENST00000508321 DISP1Q96F81 1524 aa16.69■□□□□ 0.26
HTT-204ENST00000508321 UBTFP17480 764 aaKnown RBP16.68■□□□□ 0.26
HTT-204ENST00000508321 ERCC6L2Q5T890 1561 aa16.67■□□□□ 0.26
HTT-204ENST00000508321 ARAP1Q96P48 1450 aa16.63■□□□□ 0.25
HTT-204ENST00000508321 ARHGAP35Q9NRY4 1499 aa16.57■□□□□ 0.24
HTT-204ENST00000508321 EHMT2Q96KQ7 1210 aa16.57■□□□□ 0.24
HTT-204ENST00000508321 CLIP1P30622 1438 aa16.56■□□□□ 0.24
HTT-204ENST00000508321 CEP162Q5TB80 1403 aa16.56■□□□□ 0.24
HTT-204ENST00000508321 PTPRGP23470 1445 aa16.54■□□□□ 0.24
HTT-204ENST00000508321 FHOD3Q2V2M9 1422 aa16.53■□□□□ 0.24
HTT-204ENST00000508321 FMN1Q68DA7 1419 aa16.52■□□□□ 0.23
HTT-204ENST00000508321 ABCC2Q92887 1545 aa16.51■□□□□ 0.23
HTT-204ENST00000508321 UHRF1BP1LA0JNW5 1464 aa16.51■□□□□ 0.23
HTT-204ENST00000508321 ABCA8O94911 1581 aa16.51■□□□□ 0.23
HTT-204ENST00000508321 CYB5RLQ6IPT4 315 aa16.5■□□□□ 0.23
HTT-204ENST00000508321 RAPGEF6Q8TEU7 1601 aa16.49■□□□□ 0.23
HTT-204ENST00000508321 ADCY10Q96PN6 1610 aa16.49■□□□□ 0.23
HTT-204ENST00000508321 UACAQ9BZF9 1416 aa16.48■□□□□ 0.23
HTT-204ENST00000508321 LOC105371045A0A1W2PR82 267 aa16.48■□□□□ 0.23
HTT-204ENST00000508321 HECW1Q76N89 1606 aa16.45■□□□□ 0.22
HTT-204ENST00000508321 RANGAP1P46060 587 aaPredicted RBP16.45■□□□□ 0.22
HTT-204ENST00000508321 PLB1Q6P1J6 1458 aa16.43■□□□□ 0.22
HTT-204ENST00000508321 FYCO1Q9BQS8 1478 aa16.42■□□□□ 0.22
HTT-204ENST00000508321 PCF11O94913 1555 aaKnown RBP16.42■□□□□ 0.22
HTT-204ENST00000508321 KDM5BQ9UGL1 1544 aa16.41■□□□□ 0.22
HTT-204ENST00000508321 P3H3Q8IVL6 736 aa16.41■□□□□ 0.22
HTT-204ENST00000508321 MAPKBP1O60336 1514 aa16.4■□□□□ 0.22
HTT-204ENST00000508321 CASKIN1Q8WXD9 1431 aa16.39■□□□□ 0.21
HTT-204ENST00000508321 ZCCHC11Q5TAX3 1644 aaKnown RBP16.39■□□□□ 0.21
HTT-204ENST00000508321 NUP153P49790 1475 aaKnown RBP16.38■□□□□ 0.21
HTT-204ENST00000508321 VPS8Q8N3P4 1428 aa16.37■□□□□ 0.21
HTT-204ENST00000508321 CCDC18Q5T9S5 1454 aa16.37■□□□□ 0.21
HTT-204ENST00000508321 TRHP20396 242 aaPredicted RBP16.37■□□□□ 0.21
HTT-204ENST00000508321 TTBK1Q5TCY1 1321 aaPredicted RBP16.36■□□□□ 0.21
HTT-204ENST00000508321 LRRIQ1Q96JM4 1722 aa16.33■□□□□ 0.2
HTT-204ENST00000508321 NPM1P06748 294 aaKnown RBP eCLIP16.32■□□□□ 0.2
HTT-204ENST00000508321 EPRSP07814 1512 aaKnown RBP16.32■□□□□ 0.2
HTT-204ENST00000508321 CFAP43Q8NDM7 1665 aa16.31■□□□□ 0.2
HTT-204ENST00000508321 ATP10BO94823 1461 aa16.29■□□□□ 0.2
HTT-204ENST00000508321 WDR7Q9Y4E6 1490 aa16.27■□□□□ 0.19
HTT-204ENST00000508321 MAP3K1Q13233 1512 aa16.26■□□□□ 0.19
HTT-204ENST00000508321 CDK13Q14004 1512 aaKnown RBP16.26■□□□□ 0.19
HTT-204ENST00000508321 ASXL2Q76L83 1435 aa16.26■□□□□ 0.19
HTT-204ENST00000508321 TIAM1Q13009 1591 aa16.23■□□□□ 0.19
HTT-204ENST00000508321 DIP2BQ9P265 1576 aa16.23■□□□□ 0.19
HTT-204ENST00000508321 GLI2P10070 1586 aa16.21■□□□□ 0.19
HTT-204ENST00000508321 KIF13AQ9H1H9 1805 aa16.21■□□□□ 0.19
HTT-204ENST00000508321 ABCC10Q5T3U5 1492 aa16.21■□□□□ 0.19
HTT-204ENST00000508321 EHBP1L1Q8N3D4 1523 aa16.2■□□□□ 0.18
HTT-204ENST00000508321 KIF14Q15058 1648 aa16.2■□□□□ 0.18
HTT-204ENST00000508321 CDK11AQ9UQ88 783 aaPredicted RBP16.2■□□□□ 0.18
HTT-204ENST00000508321 TROQ12816 1431 aaPredicted RBP16.19■□□□□ 0.18
HTT-204ENST00000508321 ABCA9Q8IUA7 1624 aa16.17■□□□□ 0.18
HTT-204ENST00000508321 ATP1B4Q9UN42 357 aaPredicted RBP16.17■□□□□ 0.18
HTT-204ENST00000508321 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.16■□□□□ 0.18
HTT-204ENST00000508321 HNRNPUL2Q1KMD3 747 aaKnown RBP16.16■□□□□ 0.18
HTT-204ENST00000508321 MAP3K4Q9Y6R4 1608 aa16.16■□□□□ 0.18
HTT-204ENST00000508321 PLEKHD1A6NEE1 506 aa16.15■□□□□ 0.18
HTT-204ENST00000508321 ARID3CA6NKF2 412 aa16.14■□□□□ 0.17
HTT-204ENST00000508321 MAGI3Q5TCQ9 1506 aa16.14■□□□□ 0.17
HTT-204ENST00000508321 SUPT6HQ7KZ85 1726 aaKnown RBP16.13■□□□□ 0.17
HTT-204ENST00000508321 MTUS2Q5JR59 1369 aa16.12■□□□□ 0.17
HTT-204ENST00000508321 LRRC9Q6ZRR7 1453 aa16.11■□□□□ 0.17
HTT-204ENST00000508321 APLP2Q06481 763 aa16.11■□□□□ 0.17
HTT-204ENST00000508321 MYO5CQ9NQX4 1742 aa16.11■□□□□ 0.17
HTT-204ENST00000508321 TTC37Q6PGP7 1564 aa16.1■□□□□ 0.17
HTT-204ENST00000508321 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.09■□□□□ 0.17
HTT-204ENST00000508321 ARAP3Q8WWN8 1544 aa16.09■□□□□ 0.17
HTT-204ENST00000508321 ITSN2Q9NZM3 1697 aa16.08■□□□□ 0.17
HTT-204ENST00000508321 CFAP74Q9C0B2 1584 aa16.08■□□□□ 0.16
HTT-204ENST00000508321 AEBP2Q6ZN18 517 aaPredicted RBP16.07■□□□□ 0.16
HTT-204ENST00000508321 PREX2Q70Z35 1606 aa16.07■□□□□ 0.16
HTT-204ENST00000508321 PPRC1Q5VV67 1664 aaKnown RBP16.06■□□□□ 0.16
HTT-204ENST00000508321 TEX14Q8IWB6 1497 aa16.06■□□□□ 0.16
HTT-204ENST00000508321 FAM69CQ0P6D2 419 aa16.04■□□□□ 0.16
HTT-204ENST00000508321 CDC42BPAQ5VT25 1732 aa16.04■□□□□ 0.16
HTT-204ENST00000508321 TSPOAP1O95153 1857 aa16.03■□□□□ 0.16
HTT-204ENST00000508321 NCOA2Q15596 1464 aa16.03■□□□□ 0.16
HTT-204ENST00000508321 CD109Q6YHK3 1445 aa16.02■□□□□ 0.16
HTT-204ENST00000508321 KCNH8Q96L42 1107 aa16.01■□□□□ 0.15
HTT-204ENST00000508321 CDC42BPBQ9Y5S2 1711 aa15.99■□□□□ 0.15
HTT-204ENST00000508321 NEO1Q92859 1461 aa15.99■□□□□ 0.15
HTT-204ENST00000508321 PLCH2O75038 1416 aa15.99■□□□□ 0.15
HTT-204ENST00000508321 ARHGAP5Q13017 1502 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms