RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 RUSC2Q8N2Y8 1516 aa15.94■□□□□ 0.14
DDX41-209ENST00000508279 SHROOM2Q13796 1616 aa15.92■□□□□ 0.14
DDX41-209ENST00000508279 JPH4Q96JJ6 628 aa15.9■□□□□ 0.14
DDX41-209ENST00000508279 PRG4Q92954 1404 aaPredicted RBP15.89■□□□□ 0.13
DDX41-209ENST00000508279 TRHP20396 242 aaPredicted RBP15.87■□□□□ 0.13
DDX41-209ENST00000508279 KIAA0586Q9BVV6 1533 aa15.84■□□□□ 0.13
DDX41-209ENST00000508279 RAPGEF2Q9Y4G8 1499 aa15.83■□□□□ 0.12
DDX41-209ENST00000508279 TTBK1Q5TCY1 1321 aaPredicted RBP15.81■□□□□ 0.12
DDX41-209ENST00000508279 IQGAP2Q13576 1575 aa15.78■□□□□ 0.12
DDX41-209ENST00000508279 FAM9AQ8IZU1 332 aaPredicted RBP15.75■□□□□ 0.11
DDX41-209ENST00000508279 CTTNBP2Q8WZ74 1663 aa15.73■□□□□ 0.11
DDX41-209ENST00000508279 CARMIL2Q6F5E8 1435 aa15.71■□□□□ 0.11
DDX41-209ENST00000508279 CSRNP3Q8WYN3 585 aa15.7■□□□□ 0.1
DDX41-209ENST00000508279 PRXQ9BXM0 1461 aa15.69■□□□□ 0.1
DDX41-209ENST00000508279 NPM1P06748 294 aaKnown RBP eCLIP15.68■□□□□ 0.1
DDX41-209ENST00000508279 PTPRGP23470 1445 aa15.68■□□□□ 0.1
DDX41-209ENST00000508279 ADCY10Q96PN6 1610 aa15.67■□□□□ 0.1
DDX41-209ENST00000508279 TNIKQ9UKE5 1360 aa15.66■□□□□ 0.1
DDX41-209ENST00000508279 EEA1Q15075 1411 aa15.65■□□□□ 0.1
DDX41-209ENST00000508279 DISP1Q96F81 1524 aa15.64■□□□□ 0.09
DDX41-209ENST00000508279 UGGT2Q9NYU1 1516 aa15.64■□□□□ 0.09
DDX41-209ENST00000508279 EHMT2Q96KQ7 1210 aa15.64■□□□□ 0.09
DDX41-209ENST00000508279 KIAA0556O60303 1618 aa15.63■□□□□ 0.09
DDX41-209ENST00000508279 RANGAP1P46060 587 aaPredicted RBP15.61■□□□□ 0.09
DDX41-209ENST00000508279 KIF13AQ9H1H9 1805 aa15.59■□□□□ 0.09
DDX41-209ENST00000508279 P3H3Q8IVL6 736 aa15.57■□□□□ 0.08
DDX41-209ENST00000508279 GOLGA3Q08378 1498 aa15.57■□□□□ 0.08
DDX41-209ENST00000508279 UACAQ9BZF9 1416 aa15.55■□□□□ 0.08
DDX41-209ENST00000508279 FAM69CQ0P6D2 419 aa15.54■□□□□ 0.08
DDX41-209ENST00000508279 MAPKBP1O60336 1514 aa15.53■□□□□ 0.08
DDX41-209ENST00000508279 KIF21BO75037 1637 aa15.53■□□□□ 0.08
DDX41-209ENST00000508279 ABCC2Q92887 1545 aa15.53■□□□□ 0.08
DDX41-209ENST00000508279 TSPOAP1O95153 1857 aa15.51■□□□□ 0.07
DDX41-209ENST00000508279 UBTFP17480 764 aaKnown RBP15.5■□□□□ 0.07
DDX41-209ENST00000508279 UHRF1BP1LA0JNW5 1464 aa15.5■□□□□ 0.07
DDX41-209ENST00000508279 ABCC10Q5T3U5 1492 aa15.5■□□□□ 0.07
DDX41-209ENST00000508279 PLB1Q6P1J6 1458 aa15.5■□□□□ 0.07
DDX41-209ENST00000508279 DIP2BQ9P265 1576 aa15.49■□□□□ 0.07
DDX41-209ENST00000508279 ZCCHC11Q5TAX3 1644 aaKnown RBP15.49■□□□□ 0.07
DDX41-209ENST00000508279 ARID3CA6NKF2 412 aa15.47■□□□□ 0.07
DDX41-209ENST00000508279 ASXL2Q76L83 1435 aa15.47■□□□□ 0.07
DDX41-209ENST00000508279 SAMD9Q5K651 1589 aa15.45■□□□□ 0.06
DDX41-209ENST00000508279 ABCA8O94911 1581 aa15.45■□□□□ 0.06
DDX41-209ENST00000508279 KDM5BQ9UGL1 1544 aa15.44■□□□□ 0.06
DDX41-209ENST00000508279 FHOD3Q2V2M9 1422 aa15.42■□□□□ 0.06
DDX41-209ENST00000508279 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.38■□□□□ 0.05
DDX41-209ENST00000508279 HNRNPUL2Q1KMD3 747 aaKnown RBP15.38■□□□□ 0.05
DDX41-209ENST00000508279 KCNH8Q96L42 1107 aa15.38■□□□□ 0.05
DDX41-209ENST00000508279 RAPGEF6Q8TEU7 1601 aa15.38■□□□□ 0.05
DDX41-209ENST00000508279 WDR7Q9Y4E6 1490 aa15.36■□□□□ 0.05
DDX41-209ENST00000508279 EFCAB5A4FU69 1503 aa15.36■□□□□ 0.05
DDX41-209ENST00000508279 EPRSP07814 1512 aaKnown RBP15.36■□□□□ 0.05
DDX41-209ENST00000508279 GLI2P10070 1586 aa15.34■□□□□ 0.05
DDX41-209ENST00000508279 ATP10BO94823 1461 aa15.33■□□□□ 0.04
DDX41-209ENST00000508279 KDM6BO15054 1643 aa15.32■□□□□ 0.04
DDX41-209ENST00000508279 PPRC1Q5VV67 1664 aaKnown RBP15.32■□□□□ 0.04
DDX41-209ENST00000508279 ATP1B4Q9UN42 357 aaPredicted RBP15.32■□□□□ 0.04
DDX41-209ENST00000508279 MAP3K4Q9Y6R4 1608 aa15.31■□□□□ 0.04
DDX41-209ENST00000508279 SENP3Q9H4L4 574 aaPredicted RBP15.3■□□□□ 0.04
DDX41-209ENST00000508279 NUP153P49790 1475 aaKnown RBP15.28■□□□□ 0.04
DDX41-209ENST00000508279 ARHGAP35Q9NRY4 1499 aa15.28■□□□□ 0.04
DDX41-209ENST00000508279 CFAP43Q8NDM7 1665 aa15.26■□□□□ 0.03
DDX41-209ENST00000508279 TEX14Q8IWB6 1497 aa15.25■□□□□ 0.03
DDX41-209ENST00000508279 CD109Q6YHK3 1445 aa15.25■□□□□ 0.03
DDX41-209ENST00000508279 FMN1Q68DA7 1419 aa15.23■□□□□ 0.03
DDX41-209ENST00000508279 PLEKHD1A6NEE1 506 aa15.22■□□□□ 0.03
DDX41-209ENST00000508279 CDK13Q14004 1512 aaKnown RBP15.22■□□□□ 0.03
DDX41-209ENST00000508279 HECW1Q76N89 1606 aa15.21■□□□□ 0.02
DDX41-209ENST00000508279 ABCA9Q8IUA7 1624 aa15.18■□□□□ 0.02
DDX41-209ENST00000508279 CLIP1P30622 1438 aa15.17■□□□□ 0.02
DDX41-209ENST00000508279 MAGI3Q5TCQ9 1506 aa15.17■□□□□ 0.02
DDX41-209ENST00000508279 COL17A1Q9UMD9 1497 aaPredicted RBP15.16■□□□□ 0.02
DDX41-209ENST00000508279 LRRIQ1Q96JM4 1722 aa15.15■□□□□ 0.02
DDX41-209ENST00000508279 PCF11O94913 1555 aaKnown RBP15.15■□□□□ 0.02
DDX41-209ENST00000508279 LOC105371045A0A1W2PR82 267 aa15.12■□□□□ 0.01
DDX41-209ENST00000508279 CDK11AQ9UQ88 783 aaPredicted RBP15.11■□□□□ 0.01
DDX41-209ENST00000508279 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.11■□□□□ 0.01
DDX41-209ENST00000508279 TTC37Q6PGP7 1564 aa15.11■□□□□ 0.01
DDX41-209ENST00000508279 CASKIN1Q8WXD9 1431 aa15.09■□□□□ 0.01
DDX41-209ENST00000508279 CEP162Q5TB80 1403 aa15.08■□□□□ 0
DDX41-209ENST00000508279 KIF14Q15058 1648 aa15.06■□□□□ 0
DDX41-209ENST00000508279 FYCO1Q9BQS8 1478 aa15.06■□□□□ 0
DDX41-209ENST00000508279 RAPGEF3O95398 923 aa15.05■□□□□ -0
DDX41-209ENST00000508279 TROQ12816 1431 aaPredicted RBP15.05■□□□□ -0
DDX41-209ENST00000508279 CCDC18Q5T9S5 1454 aa15.05■□□□□ -0
DDX41-209ENST00000508279 NEO1Q92859 1461 aa15.05■□□□□ -0
DDX41-209ENST00000508279 MYO5CQ9NQX4 1742 aa15.05■□□□□ -0
DDX41-209ENST00000508279 ARAP3Q8WWN8 1544 aa15.04■□□□□ -0
DDX41-209ENST00000508279 FANCAO15360 1455 aa15.04■□□□□ -0
DDX41-209ENST00000508279 CFAP74Q9C0B2 1584 aa15.03■□□□□ -0
DDX41-209ENST00000508279 PHLDB1Q86UU1 1377 aa15.03■□□□□ -0
DDX41-209ENST00000508279 PHF23Q9BUL5 403 aaPredicted RBP15.02■□□□□ -0
DDX41-209ENST00000508279 AKNAQ7Z591 1439 aa15.01□□□□□ -0.01
DDX41-209ENST00000508279 KDM4FA0A1W2PPD8 638 aa15□□□□□ -0.01
DDX41-209ENST00000508279 PLCH2O75038 1416 aa14.99□□□□□ -0.01
DDX41-209ENST00000508279 ARHGAP5Q13017 1502 aa14.98□□□□□ -0.01
DDX41-209ENST00000508279 DENND4BO75064 1496 aaPredicted RBP14.98□□□□□ -0.01
DDX41-209ENST00000508279 FRMPD1Q5SYB0 1578 aa14.98□□□□□ -0.01
DDX41-209ENST00000508279 ADGRL1O94910 1474 aa14.97□□□□□ -0.01
DDX41-209ENST00000508279 EFCAB2Q5VUJ9 269 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms