RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 CUL7Q14999 1698 aa24.77■■□□□ 1.56
RAB28-205ENST00000508274 TRHP20396 242 aaPredicted RBP24.76■■□□□ 1.55
RAB28-205ENST00000508274 PRG4Q92954 1404 aaPredicted RBP24.7■■□□□ 1.54
RAB28-205ENST00000508274 JPH4Q96JJ6 628 aa24.68■■□□□ 1.54
RAB28-205ENST00000508274 CARMIL1Q5VZK9 1371 aa24.63■■□□□ 1.53
RAB28-205ENST00000508274 KIAA0586Q9BVV6 1533 aa24.62■■□□□ 1.53
RAB28-205ENST00000508274 IQGAP2Q13576 1575 aa24.46■■□□□ 1.51
RAB28-205ENST00000508274 ADCY10Q96PN6 1610 aa24.45■■□□□ 1.5
RAB28-205ENST00000508274 RAPGEF2Q9Y4G8 1499 aa24.44■■□□□ 1.5
RAB28-205ENST00000508274 KIF13AQ9H1H9 1805 aa24.39■■□□□ 1.5
RAB28-205ENST00000508274 CARMIL2Q6F5E8 1435 aa24.34■■□□□ 1.49
RAB28-205ENST00000508274 TTBK1Q5TCY1 1321 aaPredicted RBP24.34■■□□□ 1.49
RAB28-205ENST00000508274 DISP1Q96F81 1524 aa24.32■■□□□ 1.48
RAB28-205ENST00000508274 PTPRGP23470 1445 aa24.32■■□□□ 1.48
RAB28-205ENST00000508274 MAPKBP1O60336 1514 aa24.32■■□□□ 1.48
RAB28-205ENST00000508274 TNIKQ9UKE5 1360 aa24.31■■□□□ 1.48
RAB28-205ENST00000508274 CTTNBP2Q8WZ74 1663 aa24.3■■□□□ 1.48
RAB28-205ENST00000508274 NPM1P06748 294 aaKnown RBP eCLIP24.29■■□□□ 1.48
RAB28-205ENST00000508274 UGGT2Q9NYU1 1516 aa24.29■■□□□ 1.48
RAB28-205ENST00000508274 PRXQ9BXM0 1461 aa24.27■■□□□ 1.48
RAB28-205ENST00000508274 ABCC10Q5T3U5 1492 aa24.25■■□□□ 1.47
RAB28-205ENST00000508274 KIAA0556O60303 1618 aa24.25■■□□□ 1.47
RAB28-205ENST00000508274 DIP2BQ9P265 1576 aa24.25■■□□□ 1.47
RAB28-205ENST00000508274 FAM69CQ0P6D2 419 aa24.2■■□□□ 1.47
RAB28-205ENST00000508274 ABCC2Q92887 1545 aa24.19■■□□□ 1.46
RAB28-205ENST00000508274 UACAQ9BZF9 1416 aa24.16■■□□□ 1.46
RAB28-205ENST00000508274 UHRF1BP1LA0JNW5 1464 aa24.16■■□□□ 1.46
RAB28-205ENST00000508274 TSPOAP1O95153 1857 aa24.11■■□□□ 1.45
RAB28-205ENST00000508274 CSRNP3Q8WYN3 585 aa24.1■■□□□ 1.45
RAB28-205ENST00000508274 ASXL2Q76L83 1435 aa24.08■■□□□ 1.45
RAB28-205ENST00000508274 GOLGA3Q08378 1498 aa24.08■■□□□ 1.45
RAB28-205ENST00000508274 ZCCHC11Q5TAX3 1644 aaKnown RBP24.07■■□□□ 1.44
RAB28-205ENST00000508274 KDM5BQ9UGL1 1544 aa24.06■■□□□ 1.44
RAB28-205ENST00000508274 PLB1Q6P1J6 1458 aa24.05■■□□□ 1.44
RAB28-205ENST00000508274 EEA1Q15075 1411 aa24.04■■□□□ 1.44
RAB28-205ENST00000508274 FAM9AQ8IZU1 332 aaPredicted RBP24■■□□□ 1.43
RAB28-205ENST00000508274 ABCA8O94911 1581 aa24■■□□□ 1.43
RAB28-205ENST00000508274 GLI2P10070 1586 aa23.98■■□□□ 1.43
RAB28-205ENST00000508274 PPRC1Q5VV67 1664 aaKnown RBP23.97■■□□□ 1.43
RAB28-205ENST00000508274 KDM6BO15054 1643 aa23.96■■□□□ 1.43
RAB28-205ENST00000508274 EPRSP07814 1512 aaKnown RBP23.95■■□□□ 1.42
RAB28-205ENST00000508274 SAMD9Q5K651 1589 aa23.95■■□□□ 1.42
RAB28-205ENST00000508274 P3H3Q8IVL6 736 aa23.95■■□□□ 1.42
RAB28-205ENST00000508274 KIF21BO75037 1637 aa23.9■■□□□ 1.42
RAB28-205ENST00000508274 MAP3K4Q9Y6R4 1608 aa23.9■■□□□ 1.42
RAB28-205ENST00000508274 WDR7Q9Y4E6 1490 aa23.89■■□□□ 1.41
RAB28-205ENST00000508274 RANGAP1P46060 587 aaPredicted RBP23.85■■□□□ 1.41
RAB28-205ENST00000508274 ARID3CA6NKF2 412 aa23.82■■□□□ 1.4
RAB28-205ENST00000508274 RAPGEF6Q8TEU7 1601 aa23.8■■□□□ 1.4
RAB28-205ENST00000508274 FHOD3Q2V2M9 1422 aa23.79■■□□□ 1.4
RAB28-205ENST00000508274 ATP10BO94823 1461 aa23.78■■□□□ 1.4
RAB28-205ENST00000508274 EHMT2Q96KQ7 1210 aa23.78■■□□□ 1.4
RAB28-205ENST00000508274 KCNH8Q96L42 1107 aa23.76■■□□□ 1.39
RAB28-205ENST00000508274 TEX14Q8IWB6 1497 aa23.75■■□□□ 1.39
RAB28-205ENST00000508274 CFAP43Q8NDM7 1665 aa23.75■■□□□ 1.39
RAB28-205ENST00000508274 COL17A1Q9UMD9 1497 aaPredicted RBP23.74■■□□□ 1.39
RAB28-205ENST00000508274 EFCAB5A4FU69 1503 aa23.72■■□□□ 1.39
RAB28-205ENST00000508274 NUP153P49790 1475 aaKnown RBP23.7■■□□□ 1.38
RAB28-205ENST00000508274 CD109Q6YHK3 1445 aa23.7■■□□□ 1.38
RAB28-205ENST00000508274 MAGI3Q5TCQ9 1506 aa23.68■■□□□ 1.38
RAB28-205ENST00000508274 UBTFP17480 764 aaKnown RBP23.66■■□□□ 1.38
RAB28-205ENST00000508274 SENP3Q9H4L4 574 aaPredicted RBP23.64■■□□□ 1.37
RAB28-205ENST00000508274 ABCA9Q8IUA7 1624 aa23.63■■□□□ 1.37
RAB28-205ENST00000508274 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.61■■□□□ 1.37
RAB28-205ENST00000508274 HNRNPUL2Q1KMD3 747 aaKnown RBP23.61■■□□□ 1.37
RAB28-205ENST00000508274 ARHGAP35Q9NRY4 1499 aa23.57■■□□□ 1.36
RAB28-205ENST00000508274 KDM4FA0A1W2PPD8 638 aa23.57■■□□□ 1.36
RAB28-205ENST00000508274 PHF23Q9BUL5 403 aaPredicted RBP23.56■■□□□ 1.36
RAB28-205ENST00000508274 CDK13Q14004 1512 aaKnown RBP23.53■■□□□ 1.36
RAB28-205ENST00000508274 ARAP3Q8WWN8 1544 aa23.48■■□□□ 1.35
RAB28-205ENST00000508274 ADGRL1O94910 1474 aa23.48■■□□□ 1.35
RAB28-205ENST00000508274 FMN1Q68DA7 1419 aa23.47■■□□□ 1.35
RAB28-205ENST00000508274 PLEKHD1A6NEE1 506 aa23.47■■□□□ 1.35
RAB28-205ENST00000508274 HECW1Q76N89 1606 aa23.46■■□□□ 1.35
RAB28-205ENST00000508274 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.44■■□□□ 1.34
RAB28-205ENST00000508274 TTC37Q6PGP7 1564 aa23.44■■□□□ 1.34
RAB28-205ENST00000508274 NEO1Q92859 1461 aa23.42■■□□□ 1.34
RAB28-205ENST00000508274 ATP1B4Q9UN42 357 aaPredicted RBP23.42■■□□□ 1.34
RAB28-205ENST00000508274 LRRIQ1Q96JM4 1722 aa23.41■■□□□ 1.34
RAB28-205ENST00000508274 PHLDB1Q86UU1 1377 aa23.4■■□□□ 1.34
RAB28-205ENST00000508274 FRMPD1Q5SYB0 1578 aa23.39■■□□□ 1.33
RAB28-205ENST00000508274 RAPGEF3O95398 923 aa23.36■■□□□ 1.33
RAB28-205ENST00000508274 PCF11O94913 1555 aaKnown RBP23.35■■□□□ 1.33
RAB28-205ENST00000508274 FANCAO15360 1455 aa23.34■■□□□ 1.33
RAB28-205ENST00000508274 CFAP74Q9C0B2 1584 aa23.33■■□□□ 1.33
RAB28-205ENST00000508274 KIF14Q15058 1648 aa23.32■■□□□ 1.32
RAB28-205ENST00000508274 RICTORQ6R327 1708 aa23.31■■□□□ 1.32
RAB28-205ENST00000508274 AKNAQ7Z591 1439 aa23.31■■□□□ 1.32
RAB28-205ENST00000508274 MYO5CQ9NQX4 1742 aa23.28■■□□□ 1.32
RAB28-205ENST00000508274 DENND4BO75064 1496 aaPredicted RBP23.27■■□□□ 1.32
RAB28-205ENST00000508274 CLIP1P30622 1438 aa23.26■■□□□ 1.31
RAB28-205ENST00000508274 TROQ12816 1431 aaPredicted RBP23.26■■□□□ 1.31
RAB28-205ENST00000508274 CASKIN1Q8WXD9 1431 aa23.26■■□□□ 1.31
RAB28-205ENST00000508274 PLCH2O75038 1416 aa23.25■■□□□ 1.31
RAB28-205ENST00000508274 CDK11AQ9UQ88 783 aaPredicted RBP23.25■■□□□ 1.31
RAB28-205ENST00000508274 ARHGEF40Q8TER5 1519 aa23.22■■□□□ 1.31
RAB28-205ENST00000508274 CCDC18Q5T9S5 1454 aa23.21■■□□□ 1.31
RAB28-205ENST00000508274 FYCO1Q9BQS8 1478 aa23.2■■□□□ 1.31
RAB28-205ENST00000508274 ZMYM4Q5VZL5 1548 aa23.19■■□□□ 1.3
RAB28-205ENST00000508274 SCAPERQ9BY12 1400 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms