RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 ADAMTS12P58397 1594 aa17.38■□□□□ 0.37
PROM1-207ENST00000508167 ATP1B4Q9UN42 357 aaPredicted RBP17.37■□□□□ 0.37
PROM1-207ENST00000508167 PCGF6Q9BYE7 350 aa17.34■□□□□ 0.37
PROM1-207ENST00000508167 TNIKQ9UKE5 1360 aa17.34■□□□□ 0.37
PROM1-207ENST00000508167 JPH4Q96JJ6 628 aa17.33■□□□□ 0.37
PROM1-207ENST00000508167 CEP162Q5TB80 1403 aa17.31■□□□□ 0.36
PROM1-207ENST00000508167 HRCP23327 699 aa17.29■□□□□ 0.36
PROM1-207ENST00000508167 CLIP1P30622 1438 aa17.26■□□□□ 0.35
PROM1-207ENST00000508167 CHD1O14646 1710 aa17.25■□□□□ 0.35
PROM1-207ENST00000508167 KIAA0586Q9BVV6 1533 aa17.24■□□□□ 0.35
PROM1-207ENST00000508167 TRIM26Q12899 539 aaPredicted RBP17.24■□□□□ 0.35
PROM1-207ENST00000508167 APLP2Q06481 763 aa17.24■□□□□ 0.35
PROM1-207ENST00000508167 NUP160Q12769 1436 aa17.21■□□□□ 0.35
PROM1-207ENST00000508167 CARMIL2Q6F5E8 1435 aa17.21■□□□□ 0.35
PROM1-207ENST00000508167 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.21■□□□□ 0.35
PROM1-207ENST00000508167 HNRNPUL2Q1KMD3 747 aaKnown RBP17.21■□□□□ 0.35
PROM1-207ENST00000508167 ARID3CA6NKF2 412 aa17.19■□□□□ 0.34
PROM1-207ENST00000508167 CEP170Q5SW79 1584 aa17.19■□□□□ 0.34
PROM1-207ENST00000508167 IQGAP2Q13576 1575 aa17.18■□□□□ 0.34
PROM1-207ENST00000508167 PRG4Q92954 1404 aaPredicted RBP17.18■□□□□ 0.34
PROM1-207ENST00000508167 FHOD3Q2V2M9 1422 aa17.13■□□□□ 0.33
PROM1-207ENST00000508167 CTTNBP2Q8WZ74 1663 aa17.11■□□□□ 0.33
PROM1-207ENST00000508167 CYB5RLQ6IPT4 315 aa17.11■□□□□ 0.33
PROM1-207ENST00000508167 PTPRGP23470 1445 aa17.09■□□□□ 0.33
PROM1-207ENST00000508167 PPARGC1BQ86YN6 1023 aaKnown RBP17.07■□□□□ 0.32
PROM1-207ENST00000508167 ARHGAP35Q9NRY4 1499 aa17.06■□□□□ 0.32
PROM1-207ENST00000508167 NPM1P06748 294 aaKnown RBP eCLIP17.05■□□□□ 0.32
PROM1-207ENST00000508167 ARAP1Q96P48 1450 aa17.05■□□□□ 0.32
PROM1-207ENST00000508167 UGGT2Q9NYU1 1516 aa17.02■□□□□ 0.32
PROM1-207ENST00000508167 FMN1Q68DA7 1419 aa17.01■□□□□ 0.31
PROM1-207ENST00000508167 EFCAB5A4FU69 1503 aa17.01■□□□□ 0.31
PROM1-207ENST00000508167 CLASP1Q7Z460 1538 aa17.01■□□□□ 0.31
PROM1-207ENST00000508167 VPS8Q8N3P4 1428 aa16.99■□□□□ 0.31
PROM1-207ENST00000508167 DISP1Q96F81 1524 aa16.98■□□□□ 0.31
PROM1-207ENST00000508167 KIAA0556O60303 1618 aa16.96■□□□□ 0.31
PROM1-207ENST00000508167 ERCC6L2Q5T890 1561 aa16.95■□□□□ 0.3
PROM1-207ENST00000508167 CDK11AQ9UQ88 783 aaPredicted RBP16.94■□□□□ 0.3
PROM1-207ENST00000508167 DNAJC5Q9H3Z4 198 aa16.93■□□□□ 0.3
PROM1-207ENST00000508167 ARHGEF11O15085 1522 aa16.93■□□□□ 0.3
PROM1-207ENST00000508167 PLB1Q6P1J6 1458 aa16.91■□□□□ 0.3
PROM1-207ENST00000508167 PLEKHD1A6NEE1 506 aa16.9■□□□□ 0.3
PROM1-207ENST00000508167 KCNH8Q96L42 1107 aa16.9■□□□□ 0.3
PROM1-207ENST00000508167 SAMD9Q5K651 1589 aa16.89■□□□□ 0.29
PROM1-207ENST00000508167 UACAQ9BZF9 1416 aa16.89■□□□□ 0.29
PROM1-207ENST00000508167 SHROOM2Q13796 1616 aa16.87■□□□□ 0.29
PROM1-207ENST00000508167 MTUS2Q5JR59 1369 aa16.86■□□□□ 0.29
PROM1-207ENST00000508167 CASKIN1Q8WXD9 1431 aa16.84■□□□□ 0.29
PROM1-207ENST00000508167 RIMBP3CA6NJZ7 1639 aa16.81■□□□□ 0.28
PROM1-207ENST00000508167 RIMBP3BA6NNM3 1639 aa16.81■□□□□ 0.28
PROM1-207ENST00000508167 RIMBP3Q9UFD9 1639 aa16.81■□□□□ 0.28
PROM1-207ENST00000508167 FYCO1Q9BQS8 1478 aa16.8■□□□□ 0.28
PROM1-207ENST00000508167 PCF11O94913 1555 aaKnown RBP16.79■□□□□ 0.28
PROM1-207ENST00000508167 LRRIQ1Q96JM4 1722 aa16.79■□□□□ 0.28
PROM1-207ENST00000508167 KANK4Q5T7N3 995 aaPredicted RBP16.79■□□□□ 0.28
PROM1-207ENST00000508167 CFAP43Q8NDM7 1665 aa16.78■□□□□ 0.28
PROM1-207ENST00000508167 RAPGEF6Q8TEU7 1601 aa16.77■□□□□ 0.28
PROM1-207ENST00000508167 HECW1Q76N89 1606 aa16.76■□□□□ 0.27
PROM1-207ENST00000508167 TRHP20396 242 aaPredicted RBP16.76■□□□□ 0.27
PROM1-207ENST00000508167 CDK13Q14004 1512 aaKnown RBP16.76■□□□□ 0.27
PROM1-207ENST00000508167 EPRSP07814 1512 aaKnown RBP16.75■□□□□ 0.27
PROM1-207ENST00000508167 NUP153P49790 1475 aaKnown RBP16.75■□□□□ 0.27
PROM1-207ENST00000508167 CCDC18Q5T9S5 1454 aa16.74■□□□□ 0.27
PROM1-207ENST00000508167 ABCC2Q92887 1545 aa16.74■□□□□ 0.27
PROM1-207ENST00000508167 ZNF777Q9ULD5 760 aaPredicted RBP16.72■□□□□ 0.27
PROM1-207ENST00000508167 MAP3K1Q13233 1512 aa16.72■□□□□ 0.27
PROM1-207ENST00000508167 ATP10BO94823 1461 aa16.72■□□□□ 0.27
PROM1-207ENST00000508167 ABCA8O94911 1581 aa16.71■□□□□ 0.27
PROM1-207ENST00000508167 TIAM1Q13009 1591 aa16.7■□□□□ 0.26
PROM1-207ENST00000508167 FAM50AQ14320 339 aaKnown RBP16.68■□□□□ 0.26
PROM1-207ENST00000508167 ITGAEP38570 1179 aa16.67■□□□□ 0.26
PROM1-207ENST00000508167 FAM69CQ0P6D2 419 aa16.67■□□□□ 0.26
PROM1-207ENST00000508167 UHRF1BP1LA0JNW5 1464 aa16.66■□□□□ 0.26
PROM1-207ENST00000508167 CCNB3Q8WWL7 1395 aa16.64■□□□□ 0.25
PROM1-207ENST00000508167 RRBP1Q9P2E9 1410 aaKnown RBP16.64■□□□□ 0.25
PROM1-207ENST00000508167 LRRC9Q6ZRR7 1453 aa16.64■□□□□ 0.25
PROM1-207ENST00000508167 ASXL2Q76L83 1435 aa16.64■□□□□ 0.25
PROM1-207ENST00000508167 CFDP1Q9UEE9 299 aaPredicted RBP16.63■□□□□ 0.25
PROM1-207ENST00000508167 ADCY10Q96PN6 1610 aa16.63■□□□□ 0.25
PROM1-207ENST00000508167 TROQ12816 1431 aaPredicted RBP16.63■□□□□ 0.25
PROM1-207ENST00000508167 MYT1LQ9UL68 1186 aa16.63■□□□□ 0.25
PROM1-207ENST00000508167 KDM5BQ9UGL1 1544 aa16.62■□□□□ 0.25
PROM1-207ENST00000508167 WDR7Q9Y4E6 1490 aa16.57■□□□□ 0.24
PROM1-207ENST00000508167 ZCCHC11Q5TAX3 1644 aaKnown RBP16.57■□□□□ 0.24
PROM1-207ENST00000508167 EHBP1L1Q8N3D4 1523 aa16.56■□□□□ 0.24
PROM1-207ENST00000508167 ZEB1P37275 1124 aaPredicted RBP16.56■□□□□ 0.24
PROM1-207ENST00000508167 NCOA2Q15596 1464 aa16.55■□□□□ 0.24
PROM1-207ENST00000508167 EFCAB2Q5VUJ9 269 aa16.54■□□□□ 0.24
PROM1-207ENST00000508167 PHLDB1Q86UU1 1377 aa16.51■□□□□ 0.23
PROM1-207ENST00000508167 MAGI3Q5TCQ9 1506 aa16.51■□□□□ 0.23
PROM1-207ENST00000508167 KIF14Q15058 1648 aa16.51■□□□□ 0.23
PROM1-207ENST00000508167 CD109Q6YHK3 1445 aa16.49■□□□□ 0.23
PROM1-207ENST00000508167 SUPT6HQ7KZ85 1726 aaKnown RBP16.49■□□□□ 0.23
PROM1-207ENST00000508167 ZNF644Q9H582 1327 aaPredicted RBP16.47■□□□□ 0.23
PROM1-207ENST00000508167 CHIC2Q9UKJ5 165 aa16.47■□□□□ 0.23
PROM1-207ENST00000508167 MYOM3Q5VTT5 1437 aa16.46■□□□□ 0.23
PROM1-207ENST00000508167 HNRNPMP52272 730 aaKnown RBP eCLIP16.46■□□□□ 0.22
PROM1-207ENST00000508167 ARHGAP5Q13017 1502 aa16.45■□□□□ 0.22
PROM1-207ENST00000508167 TSPY4P0CV99 314 aa16.45■□□□□ 0.22
PROM1-207ENST00000508167 TSPY10P0CW01 314 aa16.45■□□□□ 0.22
PROM1-207ENST00000508167 MAPKBP1O60336 1514 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms