RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 ZNF316A6NFI3 1004 aaPredicted RBP21.52■■□□□ 1.04
DDX41-208ENST00000507955 TIAM1Q13009 1591 aa21.52■■□□□ 1.04
DDX41-208ENST00000507955 NEUROD1Q13562 356 aa21.5■■□□□ 1.03
DDX41-208ENST00000507955 DHX57Q6P158 1386 aaKnown RBP21.5■■□□□ 1.03
DDX41-208ENST00000507955 GAPVD1Q14C86 1478 aa21.49■■□□□ 1.03
DDX41-208ENST00000507955 ACIN1Q9UKV3 1341 aaKnown RBP21.49■■□□□ 1.03
DDX41-208ENST00000507955 PCF11O94913 1555 aaKnown RBP21.49■■□□□ 1.03
DDX41-208ENST00000507955 WDR97A6NE52 1622 aa21.48■■□□□ 1.03
DDX41-208ENST00000507955 PHLDB1Q86UU1 1377 aa21.47■■□□□ 1.03
DDX41-208ENST00000507955 LRRC9Q6ZRR7 1453 aa21.47■■□□□ 1.03
DDX41-208ENST00000507955 CUL7Q14999 1698 aa21.46■■□□□ 1.03
DDX41-208ENST00000507955 FAM50AQ14320 339 aaKnown RBP21.45■■□□□ 1.02
DDX41-208ENST00000507955 FHAD1B1AJZ9 1412 aa21.45■■□□□ 1.02
DDX41-208ENST00000507955 ABCA5Q8WWZ7 1642 aa21.43■■□□□ 1.02
DDX41-208ENST00000507955 AQRO60306 1485 aaKnown RBP eCLIP21.4■■□□□ 1.027e-8■■■■■ 75.9
DDX41-208ENST00000507955 CTTNBP2Q8WZ74 1663 aa21.4■■□□□ 1.02
DDX41-208ENST00000507955 MAP3K1Q13233 1512 aa21.37■■□□□ 1.01
DDX41-208ENST00000507955 TARBP1Q13395 1621 aaKnown RBP21.36■■□□□ 1.01
DDX41-208ENST00000507955 RAB3GAP2Q9H2M9 1393 aa21.34■■□□□ 1.01
DDX41-208ENST00000507955 EFCAB5A4FU69 1503 aa21.33■■□□□ 1.01
DDX41-208ENST00000507955 CASKIN1Q8WXD9 1431 aa21.33■■□□□ 1.01
DDX41-208ENST00000507955 CFAP43Q8NDM7 1665 aa21.31■■□□□ 1
DDX41-208ENST00000507955 FYCO1Q9BQS8 1478 aa21.31■■□□□ 1
DDX41-208ENST00000507955 ARID3CA6NKF2 412 aa21.28■■□□□ 1
DDX41-208ENST00000507955 PELP1Q8IZL8 1130 aaKnown RBP21.27■■□□□ 1
DDX41-208ENST00000507955 FMN1Q68DA7 1419 aa21.27■■□□□ 1
DDX41-208ENST00000507955 SNAPC4Q5SXM2 1469 aa21.27■■□□□ 1
DDX41-208ENST00000507955 MIER1Q8N108 512 aa21.27■■□□□ 1
DDX41-208ENST00000507955 GTF3C3Q9Y5Q9 886 aa21.26■□□□□ 0.99
DDX41-208ENST00000507955 MRC2Q9UBG0 1479 aa21.26■□□□□ 0.99
DDX41-208ENST00000507955 CLSPNQ9HAW4 1339 aa21.26■□□□□ 0.99
DDX41-208ENST00000507955 ZNF608Q9ULD9 1512 aaPredicted RBP21.25■□□□□ 0.99
DDX41-208ENST00000507955 CENPBP07199 599 aaPredicted RBP21.25■□□□□ 0.99
DDX41-208ENST00000507955 YTHDC1Q96MU7 727 aaKnown RBP21.23■□□□□ 0.99
DDX41-208ENST00000507955 MTUS2Q5JR59 1369 aa21.23■□□□□ 0.99
DDX41-208ENST00000507955 SAMD9Q5K651 1589 aa21.22■□□□□ 0.99
DDX41-208ENST00000507955 SETD5Q9C0A6 1442 aa21.22■□□□□ 0.99
DDX41-208ENST00000507955 LRRIQ1Q96JM4 1722 aa21.21■□□□□ 0.99
DDX41-208ENST00000507955 PBRM1Q86U86 1689 aa21.2■□□□□ 0.98
DDX41-208ENST00000507955 SIN3AQ96ST3 1273 aa21.19■□□□□ 0.98
DDX41-208ENST00000507955 MAPKBP1O60336 1514 aa21.16■□□□□ 0.98
DDX41-208ENST00000507955 GRIN2BQ13224 1484 aa21.15■□□□□ 0.98
DDX41-208ENST00000507955 FGD6Q6ZV73 1430 aa21.13■□□□□ 0.97
DDX41-208ENST00000507955 ADAMTS12P58397 1594 aa21.12■□□□□ 0.97
DDX41-208ENST00000507955 PTPRKQ15262 1439 aa21.1■□□□□ 0.97
DDX41-208ENST00000507955 ERCC6Q03468 1493 aa21.09■□□□□ 0.97
DDX41-208ENST00000507955 NCOA2Q15596 1464 aa21.09■□□□□ 0.97
DDX41-208ENST00000507955 MAGI3Q5TCQ9 1506 aa21.09■□□□□ 0.97
DDX41-208ENST00000507955 IQGAP2Q13576 1575 aa21.09■□□□□ 0.97
DDX41-208ENST00000507955 IFT140Q96RY7 1462 aa21.07■□□□□ 0.96
DDX41-208ENST00000507955 WDR62O43379 1518 aa21.06■□□□□ 0.96
DDX41-208ENST00000507955 FBLN2P98095 1184 aa21.06■□□□□ 0.96
DDX41-208ENST00000507955 CHIC2Q9UKJ5 165 aa21.04■□□□□ 0.96
DDX41-208ENST00000507955 CDK13Q14004 1512 aaKnown RBP21.03■□□□□ 0.96
DDX41-208ENST00000507955 MYOM3Q5VTT5 1437 aa21.02■□□□□ 0.95
DDX41-208ENST00000507955 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.99■□□□□ 0.95
DDX41-208ENST00000507955 EIF4G3O43432 1585 aaKnown RBP20.98■□□□□ 0.95
DDX41-208ENST00000507955 RRP7BPQ9NSQ0 103 aa20.98■□□□□ 0.95
DDX41-208ENST00000507955 EPRSP07814 1512 aaKnown RBP20.98■□□□□ 0.95
DDX41-208ENST00000507955 SUPT6HQ7KZ85 1726 aaKnown RBP20.97■□□□□ 0.95
DDX41-208ENST00000507955 CHMP7Q8WUX9 453 aaPredicted RBP20.96■□□□□ 0.95
DDX41-208ENST00000507955 EHBP1L1Q8N3D4 1523 aa20.96■□□□□ 0.95
DDX41-208ENST00000507955 HIRIP3Q9BW71 556 aaPredicted RBP20.96■□□□□ 0.95
DDX41-208ENST00000507955 THOC2Q8NI27 1593 aaKnown RBP20.94■□□□□ 0.94
DDX41-208ENST00000507955 UGGT2Q9NYU1 1516 aa20.94■□□□□ 0.94
DDX41-208ENST00000507955 GRIN2AQ12879 1464 aa20.93■□□□□ 0.94
DDX41-208ENST00000507955 CCDC18Q5T9S5 1454 aa20.93■□□□□ 0.94
DDX41-208ENST00000507955 HECW1Q76N89 1606 aa20.93■□□□□ 0.94
DDX41-208ENST00000507955 DISP1Q96F81 1524 aa20.93■□□□□ 0.94
DDX41-208ENST00000507955 KIAA0586Q9BVV6 1533 aa20.92■□□□□ 0.94
DDX41-208ENST00000507955 PTPN23Q9H3S7 1636 aa20.91■□□□□ 0.94
DDX41-208ENST00000507955 NAIPQ13075 1403 aa20.9■□□□□ 0.94
DDX41-208ENST00000507955 HFM1A2PYH4 1435 aa20.9■□□□□ 0.94
DDX41-208ENST00000507955 ARHGEF11O15085 1522 aa20.89■□□□□ 0.93
DDX41-208ENST00000507955 KIAA0556O60303 1618 aa20.86■□□□□ 0.93
DDX41-208ENST00000507955 ZNF644Q9H582 1327 aaPredicted RBP20.86■□□□□ 0.93
DDX41-208ENST00000507955 NUP153P49790 1475 aaKnown RBP20.83■□□□□ 0.92
DDX41-208ENST00000507955 PPP1R15AO75807 674 aaPredicted RBP20.83■□□□□ 0.92
DDX41-208ENST00000507955 CEP170Q5SW79 1584 aa20.82■□□□□ 0.92
DDX41-208ENST00000507955 TRIM52Q96A61 297 aa20.82■□□□□ 0.92
DDX41-208ENST00000507955 UACAQ9BZF9 1416 aa20.82■□□□□ 0.92
DDX41-208ENST00000507955 PLB1Q6P1J6 1458 aa20.8■□□□□ 0.92
DDX41-208ENST00000507955 DDX10Q13206 875 aaKnown RBP20.8■□□□□ 0.92
DDX41-208ENST00000507955 JPH4Q96JJ6 628 aa20.79■□□□□ 0.92
DDX41-208ENST00000507955 KCNH8Q96L42 1107 aa20.79■□□□□ 0.92
DDX41-208ENST00000507955 SYNJ2O15056 1496 aa20.79■□□□□ 0.92
DDX41-208ENST00000507955 KDM6BO15054 1643 aa20.79■□□□□ 0.92
DDX41-208ENST00000507955 MAGI1Q96QZ7 1491 aaPredicted RBP20.78■□□□□ 0.92
DDX41-208ENST00000507955 FOXD1Q16676 465 aa20.78■□□□□ 0.92
DDX41-208ENST00000507955 PRG4Q92954 1404 aaPredicted RBP20.77■□□□□ 0.92
DDX41-208ENST00000507955 TONSLQ96HA7 1378 aa20.77■□□□□ 0.92
DDX41-208ENST00000507955 TCOF1Q13428 1488 aaKnown RBP20.77■□□□□ 0.91
DDX41-208ENST00000507955 RAPGEF6Q8TEU7 1601 aa20.75■□□□□ 0.91
DDX41-208ENST00000507955 ZNF777Q9ULD5 760 aaPredicted RBP20.73■□□□□ 0.91
DDX41-208ENST00000507955 TIMELESSQ9UNS1 1208 aa20.72■□□□□ 0.91
DDX41-208ENST00000507955 MIA2Q96PC5 1412 aa20.71■□□□□ 0.91
DDX41-208ENST00000507955 DENND4BO75064 1496 aaPredicted RBP20.7■□□□□ 0.9
DDX41-208ENST00000507955 CDK11AQ9UQ88 783 aaPredicted RBP20.7■□□□□ 0.9
DDX41-208ENST00000507955 MPHOSPH9Q99550 1183 aa20.67■□□□□ 0.9
DDX41-208ENST00000507955 NUP160Q12769 1436 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms