RNA–Protein interactions for RNA: ENST00000507902.5

PTPN13-206, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 4

Gene PTPN13, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-206ENST00000507902 KIAA0586Q9BVV6 1533 aa23.26■■□□□ 1.31
PTPN13-206ENST00000507902 CYB5RLQ6IPT4 315 aa23.2■■□□□ 1.3
PTPN13-206ENST00000507902 CHIC1Q5VXU3 224 aa23.18■■□□□ 1.3
PTPN13-206ENST00000507902 JPH4Q96JJ6 628 aa23.17■■□□□ 1.3
PTPN13-206ENST00000507902 PRXQ9BXM0 1461 aa23.17■■□□□ 1.3
PTPN13-206ENST00000507902 PRG4Q92954 1404 aaPredicted RBP23.16■■□□□ 1.3
PTPN13-206ENST00000507902 IQGAP2Q13576 1575 aa23.15■■□□□ 1.3
PTPN13-206ENST00000507902 ERCC6L2Q5T890 1561 aa23.12■■□□□ 1.29
PTPN13-206ENST00000507902 CSRNP3Q8WYN3 585 aa23.11■■□□□ 1.29
PTPN13-206ENST00000507902 CTTNBP2Q8WZ74 1663 aa23.09■■□□□ 1.29
PTPN13-206ENST00000507902 CARMIL2Q6F5E8 1435 aa23.06■■□□□ 1.28
PTPN13-206ENST00000507902 UGGT2Q9NYU1 1516 aa23.01■■□□□ 1.27
PTPN13-206ENST00000507902 KIF21BO75037 1637 aa22.99■■□□□ 1.27
PTPN13-206ENST00000507902 FAM9AQ8IZU1 332 aaPredicted RBP22.96■■□□□ 1.27
PTPN13-206ENST00000507902 GOLGA3Q08378 1498 aa22.94■■□□□ 1.26
PTPN13-206ENST00000507902 TNIKQ9UKE5 1360 aa22.92■■□□□ 1.26
PTPN13-206ENST00000507902 DISP1Q96F81 1524 aa22.92■■□□□ 1.26
PTPN13-206ENST00000507902 KIAA0556O60303 1618 aa22.91■■□□□ 1.26
PTPN13-206ENST00000507902 PTPRGP23470 1445 aa22.9■■□□□ 1.26
PTPN13-206ENST00000507902 ADCY10Q96PN6 1610 aa22.82■■□□□ 1.24
PTPN13-206ENST00000507902 NPM1P06748 294 aaKnown RBP eCLIP22.81■■□□□ 1.24
PTPN13-206ENST00000507902 SAMD9Q5K651 1589 aa22.76■■□□□ 1.23
PTPN13-206ENST00000507902 TRHP20396 242 aaPredicted RBP22.76■■□□□ 1.23
PTPN13-206ENST00000507902 UHRF1BP1LA0JNW5 1464 aa22.76■■□□□ 1.23
PTPN13-206ENST00000507902 TTBK1Q5TCY1 1321 aaPredicted RBP22.76■■□□□ 1.23
PTPN13-206ENST00000507902 UACAQ9BZF9 1416 aa22.75■■□□□ 1.23
PTPN13-206ENST00000507902 ABCC2Q92887 1545 aa22.74■■□□□ 1.23
PTPN13-206ENST00000507902 EFCAB5A4FU69 1503 aa22.73■■□□□ 1.23
PTPN13-206ENST00000507902 MAPKBP1O60336 1514 aa22.73■■□□□ 1.23
PTPN13-206ENST00000507902 UBTFP17480 764 aaKnown RBP22.72■■□□□ 1.23
PTPN13-206ENST00000507902 ABCA8O94911 1581 aa22.64■■□□□ 1.22
PTPN13-206ENST00000507902 KDM5BQ9UGL1 1544 aa22.63■■□□□ 1.21
PTPN13-206ENST00000507902 PLB1Q6P1J6 1458 aa22.63■■□□□ 1.21
PTPN13-206ENST00000507902 EHMT2Q96KQ7 1210 aa22.61■■□□□ 1.21
PTPN13-206ENST00000507902 RANGAP1P46060 587 aaPredicted RBP22.6■■□□□ 1.21
PTPN13-206ENST00000507902 AEBP2Q6ZN18 517 aaPredicted RBP22.6■■□□□ 1.21
PTPN13-206ENST00000507902 P3H3Q8IVL6 736 aa22.6■■□□□ 1.21
PTPN13-206ENST00000507902 ZCCHC11Q5TAX3 1644 aaKnown RBP22.59■■□□□ 1.21
PTPN13-206ENST00000507902 ABCC10Q5T3U5 1492 aa22.59■■□□□ 1.21
PTPN13-206ENST00000507902 KIF13AQ9H1H9 1805 aa22.57■■□□□ 1.2
PTPN13-206ENST00000507902 FHOD3Q2V2M9 1422 aa22.57■■□□□ 1.2
PTPN13-206ENST00000507902 DIP2BQ9P265 1576 aa22.56■■□□□ 1.2
PTPN13-206ENST00000507902 RAPGEF6Q8TEU7 1601 aa22.55■■□□□ 1.2
PTPN13-206ENST00000507902 ASXL2Q76L83 1435 aa22.55■■□□□ 1.2
PTPN13-206ENST00000507902 FMN1Q68DA7 1419 aa22.5■■□□□ 1.19
PTPN13-206ENST00000507902 ARHGAP35Q9NRY4 1499 aa22.49■■□□□ 1.19
PTPN13-206ENST00000507902 FAM69CQ0P6D2 419 aa22.49■■□□□ 1.19
PTPN13-206ENST00000507902 WDR7Q9Y4E6 1490 aa22.47■■□□□ 1.19
PTPN13-206ENST00000507902 GLI2P10070 1586 aa22.46■■□□□ 1.19
PTPN13-206ENST00000507902 NUP153P49790 1475 aaKnown RBP22.42■■□□□ 1.18
PTPN13-206ENST00000507902 EPRSP07814 1512 aaKnown RBP22.41■■□□□ 1.18
PTPN13-206ENST00000507902 ATP10BO94823 1461 aa22.41■■□□□ 1.18
PTPN13-206ENST00000507902 HECW1Q76N89 1606 aa22.4■■□□□ 1.18
PTPN13-206ENST00000507902 CLIP1P30622 1438 aa22.4■■□□□ 1.18
PTPN13-206ENST00000507902 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.35■■□□□ 1.17
PTPN13-206ENST00000507902 HNRNPUL2Q1KMD3 747 aaKnown RBP22.35■■□□□ 1.17
PTPN13-206ENST00000507902 MAP3K4Q9Y6R4 1608 aa22.35■■□□□ 1.17
PTPN13-206ENST00000507902 ARID3CA6NKF2 412 aa22.34■■□□□ 1.17
PTPN13-206ENST00000507902 TSPOAP1O95153 1857 aa22.32■■□□□ 1.16
PTPN13-206ENST00000507902 CFAP43Q8NDM7 1665 aa22.32■■□□□ 1.16
PTPN13-206ENST00000507902 TEX14Q8IWB6 1497 aa22.31■■□□□ 1.16
PTPN13-206ENST00000507902 CEP162Q5TB80 1403 aa22.29■■□□□ 1.16
PTPN13-206ENST00000507902 CASKIN1Q8WXD9 1431 aa22.28■■□□□ 1.16
PTPN13-206ENST00000507902 KCNH8Q96L42 1107 aa22.27■■□□□ 1.16
PTPN13-206ENST00000507902 FYCO1Q9BQS8 1478 aa22.27■■□□□ 1.16
PTPN13-206ENST00000507902 PCF11O94913 1555 aaKnown RBP22.26■■□□□ 1.15
PTPN13-206ENST00000507902 PLEKHD1A6NEE1 506 aa22.26■■□□□ 1.15
PTPN13-206ENST00000507902 ATP1B4Q9UN42 357 aaPredicted RBP22.26■■□□□ 1.15
PTPN13-206ENST00000507902 CCDC18Q5T9S5 1454 aa22.26■■□□□ 1.15
PTPN13-206ENST00000507902 CDK11AQ9UQ88 783 aaPredicted RBP22.25■■□□□ 1.15
PTPN13-206ENST00000507902 PPRC1Q5VV67 1664 aaKnown RBP22.25■■□□□ 1.15
PTPN13-206ENST00000507902 ABCA9Q8IUA7 1624 aa22.24■■□□□ 1.15
PTPN13-206ENST00000507902 CDK13Q14004 1512 aaKnown RBP22.24■■□□□ 1.15
PTPN13-206ENST00000507902 CD109Q6YHK3 1445 aa22.23■■□□□ 1.15
PTPN13-206ENST00000507902 KDM6BO15054 1643 aa22.23■■□□□ 1.15
PTPN13-206ENST00000507902 MAGI3Q5TCQ9 1506 aa22.22■■□□□ 1.15
PTPN13-206ENST00000507902 LOC105371045A0A1W2PR82 267 aa22.17■■□□□ 1.14
PTPN13-206ENST00000507902 LRRIQ1Q96JM4 1722 aa22.16■■□□□ 1.14
PTPN13-206ENST00000507902 KIF14Q15058 1648 aa22.13■■□□□ 1.13
PTPN13-206ENST00000507902 TROQ12816 1431 aaPredicted RBP22.12■■□□□ 1.13
PTPN13-206ENST00000507902 PHLDB1Q86UU1 1377 aa22.12■■□□□ 1.13
PTPN13-206ENST00000507902 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.11■■□□□ 1.13
PTPN13-206ENST00000507902 CFAP74Q9C0B2 1584 aa22.09■■□□□ 1.13
PTPN13-206ENST00000507902 TTC37Q6PGP7 1564 aa22.08■■□□□ 1.13
PTPN13-206ENST00000507902 NEO1Q92859 1461 aa22.08■■□□□ 1.12
PTPN13-206ENST00000507902 VPS8Q8N3P4 1428 aa22.05■■□□□ 1.12
PTPN13-206ENST00000507902 MYO5CQ9NQX4 1742 aa22.03■■□□□ 1.12
PTPN13-206ENST00000507902 ARAP3Q8WWN8 1544 aa22.03■■□□□ 1.12
PTPN13-206ENST00000507902 FANCAO15360 1455 aa22.01■■□□□ 1.11
PTPN13-206ENST00000507902 PLCH2O75038 1416 aa21.98■■□□□ 1.11
PTPN13-206ENST00000507902 COL17A1Q9UMD9 1497 aaPredicted RBP21.97■■□□□ 1.11
PTPN13-206ENST00000507902 MTUS2Q5JR59 1369 aa21.97■■□□□ 1.11
PTPN13-206ENST00000507902 EHBP1L1Q8N3D4 1523 aa21.96■■□□□ 1.11
PTPN13-206ENST00000507902 ARHGAP5Q13017 1502 aa21.93■■□□□ 1.1
PTPN13-206ENST00000507902 PREX2Q70Z35 1606 aa21.93■■□□□ 1.1
PTPN13-206ENST00000507902 AKNAQ7Z591 1439 aa21.93■■□□□ 1.1
PTPN13-206ENST00000507902 TIAM1Q13009 1591 aa21.92■■□□□ 1.1
PTPN13-206ENST00000507902 EFCAB2Q5VUJ9 269 aa21.91■■□□□ 1.1
PTPN13-206ENST00000507902 MAP3K1Q13233 1512 aa21.9■■□□□ 1.1
PTPN13-206ENST00000507902 DENND4BO75064 1496 aaPredicted RBP21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms