RNA–Protein interactions for RNA: ENST00000507901.5

DDR1-261, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-261ENST00000507901 EEA1Q15075 1411 aa27.61■■■□□ 2.01
DDR1-261ENST00000507901 CYB5RLQ6IPT4 315 aa27.61■■■□□ 2.01
DDR1-261ENST00000507901 KIAA0586Q9BVV6 1533 aa27.58■■■□□ 2.01
DDR1-261ENST00000507901 ARAP1Q96P48 1450 aa27.56■■■□□ 2
DDR1-261ENST00000507901 ERCC6L2Q5T890 1561 aa27.54■■■□□ 2
DDR1-261ENST00000507901 CSRNP3Q8WYN3 585 aa27.49■■□□□ 1.99
DDR1-261ENST00000507901 JPH4Q96JJ6 628 aa27.45■■□□□ 1.98
DDR1-261ENST00000507901 IQGAP2Q13576 1575 aa27.44■■□□□ 1.98
DDR1-261ENST00000507901 PRG4Q92954 1404 aaPredicted RBP27.42■■□□□ 1.98
DDR1-261ENST00000507901 CTTNBP2Q8WZ74 1663 aa27.41■■□□□ 1.98
DDR1-261ENST00000507901 KIF21BO75037 1637 aa27.38■■□□□ 1.97
DDR1-261ENST00000507901 UGGT2Q9NYU1 1516 aa27.34■■□□□ 1.97
DDR1-261ENST00000507901 FAM9AQ8IZU1 332 aaPredicted RBP27.31■■□□□ 1.96
DDR1-261ENST00000507901 DISP1Q96F81 1524 aa27.28■■□□□ 1.96
DDR1-261ENST00000507901 KIAA0556O60303 1618 aa27.2■■□□□ 1.95
DDR1-261ENST00000507901 CARMIL2Q6F5E8 1435 aa27.19■■□□□ 1.94
DDR1-261ENST00000507901 TRHP20396 242 aaPredicted RBP27.19■■□□□ 1.94
DDR1-261ENST00000507901 GOLGA3Q08378 1498 aa27.14■■□□□ 1.94
DDR1-261ENST00000507901 TNIKQ9UKE5 1360 aa27.14■■□□□ 1.94
DDR1-261ENST00000507901 SAMD9Q5K651 1589 aa27.1■■□□□ 1.93
DDR1-261ENST00000507901 ADCY10Q96PN6 1610 aa27.08■■□□□ 1.93
DDR1-261ENST00000507901 PTPRGP23470 1445 aa27.08■■□□□ 1.93
DDR1-261ENST00000507901 UHRF1BP1LA0JNW5 1464 aa27■■□□□ 1.91
DDR1-261ENST00000507901 UACAQ9BZF9 1416 aa26.95■■□□□ 1.9
DDR1-261ENST00000507901 EFCAB5A4FU69 1503 aa26.95■■□□□ 1.9
DDR1-261ENST00000507901 ABCC2Q92887 1545 aa26.95■■□□□ 1.9
DDR1-261ENST00000507901 ABCA8O94911 1581 aa26.92■■□□□ 1.9
DDR1-261ENST00000507901 UBTFP17480 764 aaKnown RBP26.91■■□□□ 1.9
DDR1-261ENST00000507901 MAPKBP1O60336 1514 aa26.9■■□□□ 1.9
DDR1-261ENST00000507901 PLB1Q6P1J6 1458 aa26.88■■□□□ 1.89
DDR1-261ENST00000507901 EHMT2Q96KQ7 1210 aa26.88■■□□□ 1.89
DDR1-261ENST00000507901 KDM5BQ9UGL1 1544 aa26.86■■□□□ 1.89
DDR1-261ENST00000507901 TTBK1Q5TCY1 1321 aaPredicted RBP26.85■■□□□ 1.89
DDR1-261ENST00000507901 FHOD3Q2V2M9 1422 aa26.84■■□□□ 1.89
DDR1-261ENST00000507901 ARHGAP35Q9NRY4 1499 aa26.84■■□□□ 1.89
DDR1-261ENST00000507901 NPM1P06748 294 aaKnown RBP eCLIP26.83■■□□□ 1.89
DDR1-261ENST00000507901 P3H3Q8IVL6 736 aa26.83■■□□□ 1.89
DDR1-261ENST00000507901 ZCCHC11Q5TAX3 1644 aaKnown RBP26.79■■□□□ 1.88
DDR1-261ENST00000507901 RAPGEF6Q8TEU7 1601 aa26.76■■□□□ 1.87
DDR1-261ENST00000507901 RANGAP1P46060 587 aaPredicted RBP26.76■■□□□ 1.87
DDR1-261ENST00000507901 KIF13AQ9H1H9 1805 aa26.76■■□□□ 1.87
DDR1-261ENST00000507901 ABCC10Q5T3U5 1492 aa26.72■■□□□ 1.87
DDR1-261ENST00000507901 DIP2BQ9P265 1576 aa26.71■■□□□ 1.87
DDR1-261ENST00000507901 NUP153P49790 1475 aaKnown RBP26.68■■□□□ 1.86
DDR1-261ENST00000507901 ASXL2Q76L83 1435 aa26.68■■□□□ 1.86
DDR1-261ENST00000507901 ATP10BO94823 1461 aa26.66■■□□□ 1.86
DDR1-261ENST00000507901 FMN1Q68DA7 1419 aa26.64■■□□□ 1.85
DDR1-261ENST00000507901 CLIP1P30622 1438 aa26.63■■□□□ 1.85
DDR1-261ENST00000507901 FAM69CQ0P6D2 419 aa26.61■■□□□ 1.85
DDR1-261ENST00000507901 GLI2P10070 1586 aa26.6■■□□□ 1.85
DDR1-261ENST00000507901 LOC105371045A0A1W2PR82 267 aa26.59■■□□□ 1.85
DDR1-261ENST00000507901 WDR7Q9Y4E6 1490 aa26.58■■□□□ 1.85
DDR1-261ENST00000507901 EPRSP07814 1512 aaKnown RBP26.57■■□□□ 1.84
DDR1-261ENST00000507901 CEP162Q5TB80 1403 aa26.56■■□□□ 1.84
DDR1-261ENST00000507901 HECW1Q76N89 1606 aa26.53■■□□□ 1.84
DDR1-261ENST00000507901 LRRIQ1Q96JM4 1722 aa26.52■■□□□ 1.84
DDR1-261ENST00000507901 PCF11O94913 1555 aaKnown RBP26.5■■□□□ 1.83
DDR1-261ENST00000507901 MAP3K4Q9Y6R4 1608 aa26.49■■□□□ 1.83
DDR1-261ENST00000507901 CASKIN1Q8WXD9 1431 aa26.48■■□□□ 1.83
DDR1-261ENST00000507901 PPRC1Q5VV67 1664 aaKnown RBP26.47■■□□□ 1.83
DDR1-261ENST00000507901 ARID3CA6NKF2 412 aa26.47■■□□□ 1.83
DDR1-261ENST00000507901 CDK13Q14004 1512 aaKnown RBP26.46■■□□□ 1.83
DDR1-261ENST00000507901 FYCO1Q9BQS8 1478 aa26.42■■□□□ 1.82
DDR1-261ENST00000507901 CFAP43Q8NDM7 1665 aa26.4■■□□□ 1.82
DDR1-261ENST00000507901 TSPOAP1O95153 1857 aa26.39■■□□□ 1.82
DDR1-261ENST00000507901 ABCA9Q8IUA7 1624 aa26.39■■□□□ 1.81
DDR1-261ENST00000507901 CCDC18Q5T9S5 1454 aa26.35■■□□□ 1.81
DDR1-261ENST00000507901 MAGI3Q5TCQ9 1506 aa26.31■■□□□ 1.8
DDR1-261ENST00000507901 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.31■■□□□ 1.8
DDR1-261ENST00000507901 HNRNPUL2Q1KMD3 747 aaKnown RBP26.31■■□□□ 1.8
DDR1-261ENST00000507901 KCNH8Q96L42 1107 aa26.31■■□□□ 1.8
DDR1-261ENST00000507901 PLEKHD1A6NEE1 506 aa26.3■■□□□ 1.8
DDR1-261ENST00000507901 CD109Q6YHK3 1445 aa26.28■■□□□ 1.8
DDR1-261ENST00000507901 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.27■■□□□ 1.86e-7■■■■□ 21.9
DDR1-261ENST00000507901 ATP1B4Q9UN42 357 aaPredicted RBP26.26■■□□□ 1.79
DDR1-261ENST00000507901 TROQ12816 1431 aaPredicted RBP26.25■■□□□ 1.79
DDR1-261ENST00000507901 VPS8Q8N3P4 1428 aa26.25■■□□□ 1.79
DDR1-261ENST00000507901 TTC37Q6PGP7 1564 aa26.24■■□□□ 1.79
DDR1-261ENST00000507901 TEX14Q8IWB6 1497 aa26.24■■□□□ 1.79
DDR1-261ENST00000507901 KIF14Q15058 1648 aa26.22■■□□□ 1.79
DDR1-261ENST00000507901 CDK11AQ9UQ88 783 aaPredicted RBP26.19■■□□□ 1.78
DDR1-261ENST00000507901 KDM6BO15054 1643 aa26.18■■□□□ 1.78
DDR1-261ENST00000507901 COL17A1Q9UMD9 1497 aaPredicted RBP26.16■■□□□ 1.78
DDR1-261ENST00000507901 AEBP2Q6ZN18 517 aaPredicted RBP26.14■■□□□ 1.78
DDR1-261ENST00000507901 ARAP3Q8WWN8 1544 aa26.11■■□□□ 1.77
DDR1-261ENST00000507901 NEO1Q92859 1461 aa26.11■■□□□ 1.77
DDR1-261ENST00000507901 TIAM1Q13009 1591 aa26.1■■□□□ 1.77
DDR1-261ENST00000507901 MYO5CQ9NQX4 1742 aa26.1■■□□□ 1.77
DDR1-261ENST00000507901 PLCH2O75038 1416 aa26.09■■□□□ 1.77
DDR1-261ENST00000507901 MAP3K1Q13233 1512 aa26.09■■□□□ 1.77
DDR1-261ENST00000507901 PHLDB1Q86UU1 1377 aa26.07■■□□□ 1.76
DDR1-261ENST00000507901 EHBP1L1Q8N3D4 1523 aa26.06■■□□□ 1.76
DDR1-261ENST00000507901 CFAP74Q9C0B2 1584 aa26.05■■□□□ 1.76
DDR1-261ENST00000507901 CDC42BPBQ9Y5S2 1711 aa26.03■■□□□ 1.76
DDR1-261ENST00000507901 FANCAO15360 1455 aa26.03■■□□□ 1.76
DDR1-261ENST00000507901 PREX2Q70Z35 1606 aa26.03■■□□□ 1.76
DDR1-261ENST00000507901 CDC42BPAQ5VT25 1732 aa26.02■■□□□ 1.76
DDR1-261ENST00000507901 MTUS2Q5JR59 1369 aa25.99■■□□□ 1.75
DDR1-261ENST00000507901 AKNAQ7Z591 1439 aa25.98■■□□□ 1.75
DDR1-261ENST00000507901 FRMPD1Q5SYB0 1578 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms