RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 CTTNBP2Q8WZ74 1663 aa28.02■■■□□ 2.08
RNF4-209ENST00000507784 CEP162Q5TB80 1403 aa27.93■■■□□ 2.06
RNF4-209ENST00000507784 CEP170Q5SW79 1584 aa27.9■■■□□ 2.06
RNF4-209ENST00000507784 CLIP1P30622 1438 aa27.86■■■□□ 2.05
RNF4-209ENST00000507784 NUP160Q12769 1436 aa27.85■■■□□ 2.05
RNF4-209ENST00000507784 KIAA0586Q9BVV6 1533 aa27.83■■■□□ 2.05
RNF4-209ENST00000507784 IQGAP2Q13576 1575 aa27.83■■■□□ 2.05
RNF4-209ENST00000507784 P3H3Q8IVL6 736 aa27.74■■■□□ 2.03
RNF4-209ENST00000507784 ARHGAP35Q9NRY4 1499 aa27.7■■■□□ 2.03
RNF4-209ENST00000507784 JPH4Q96JJ6 628 aa27.69■■■□□ 2.02
RNF4-209ENST00000507784 OSCARQ8IYS5 282 aa27.68■■■□□ 2.02
RNF4-209ENST00000507784 EFCAB5A4FU69 1503 aa27.67■■■□□ 2.02
RNF4-209ENST00000507784 UGGT2Q9NYU1 1516 aa27.67■■■□□ 2.02
RNF4-209ENST00000507784 CLASP1Q7Z460 1538 aa27.63■■■□□ 2.01
RNF4-209ENST00000507784 SAMD9Q5K651 1589 aa27.63■■■□□ 2.01
RNF4-209ENST00000507784 ARAP1Q96P48 1450 aa27.63■■■□□ 2.01
RNF4-209ENST00000507784 FHOD3Q2V2M9 1422 aa27.6■■■□□ 2.01
RNF4-209ENST00000507784 CARMIL2Q6F5E8 1435 aa27.56■■■□□ 2
RNF4-209ENST00000507784 KIAA0556O60303 1618 aa27.56■■■□□ 2
RNF4-209ENST00000507784 TTBK1Q5TCY1 1321 aaPredicted RBP27.55■■■□□ 2
RNF4-209ENST00000507784 PRG4Q92954 1404 aaPredicted RBP27.55■■■□□ 2
RNF4-209ENST00000507784 DISP1Q96F81 1524 aa27.55■■■□□ 2
RNF4-209ENST00000507784 SHROOM2Q13796 1616 aa27.55■■■□□ 2
RNF4-209ENST00000507784 VPS8Q8N3P4 1428 aa27.52■■■□□ 2
RNF4-209ENST00000507784 FMN1Q68DA7 1419 aa27.43■■□□□ 1.98
RNF4-209ENST00000507784 ATP1B4Q9UN42 357 aaPredicted RBP27.43■■□□□ 1.98
RNF4-209ENST00000507784 ERCC6L2Q5T890 1561 aa27.41■■□□□ 1.98
RNF4-209ENST00000507784 APLP2Q06481 763 aa27.37■■□□□ 1.97
RNF4-209ENST00000507784 PCF11O94913 1555 aaKnown RBP27.35■■□□□ 1.97
RNF4-209ENST00000507784 PTPRGP23470 1445 aa27.33■■□□□ 1.97
RNF4-209ENST00000507784 CASKIN1Q8WXD9 1431 aa27.31■■□□□ 1.96
RNF4-209ENST00000507784 FYCO1Q9BQS8 1478 aa27.28■■□□□ 1.96
RNF4-209ENST00000507784 PPARGC1BQ86YN6 1023 aaKnown RBP27.27■■□□□ 1.96
RNF4-209ENST00000507784 RAPGEF6Q8TEU7 1601 aa27.26■■□□□ 1.95
RNF4-209ENST00000507784 HECW1Q76N89 1606 aa27.23■■□□□ 1.95
RNF4-209ENST00000507784 PLB1Q6P1J6 1458 aa27.22■■□□□ 1.95
RNF4-209ENST00000507784 ARID3CA6NKF2 412 aa27.2■■□□□ 1.94
RNF4-209ENST00000507784 ABCA8O94911 1581 aa27.18■■□□□ 1.94
RNF4-209ENST00000507784 LRRIQ1Q96JM4 1722 aa27.17■■□□□ 1.94
RNF4-209ENST00000507784 ARHGEF11O15085 1522 aa27.16■■□□□ 1.94
RNF4-209ENST00000507784 UACAQ9BZF9 1416 aa27.16■■□□□ 1.94
RNF4-209ENST00000507784 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.14■■□□□ 1.94
RNF4-209ENST00000507784 HNRNPUL2Q1KMD3 747 aaKnown RBP27.14■■□□□ 1.94
RNF4-209ENST00000507784 TIAM1Q13009 1591 aa27.14■■□□□ 1.93
RNF4-209ENST00000507784 CFAP43Q8NDM7 1665 aa27.12■■□□□ 1.93
RNF4-209ENST00000507784 NUP153P49790 1475 aaKnown RBP27.12■■□□□ 1.93
RNF4-209ENST00000507784 RIMBP3CA6NJZ7 1639 aa27.12■■□□□ 1.93
RNF4-209ENST00000507784 RIMBP3BA6NNM3 1639 aa27.12■■□□□ 1.93
RNF4-209ENST00000507784 RIMBP3Q9UFD9 1639 aa27.12■■□□□ 1.93
RNF4-209ENST00000507784 CCDC18Q5T9S5 1454 aa27.11■■□□□ 1.93
RNF4-209ENST00000507784 EPRSP07814 1512 aaKnown RBP27.11■■□□□ 1.93
RNF4-209ENST00000507784 MAP3K1Q13233 1512 aa27.11■■□□□ 1.93
RNF4-209ENST00000507784 CDK13Q14004 1512 aaKnown RBP27.08■■□□□ 1.93
RNF4-209ENST00000507784 KANK4Q5T7N3 995 aaPredicted RBP27.08■■□□□ 1.93
RNF4-209ENST00000507784 ABCC2Q92887 1545 aa27.06■■□□□ 1.92
RNF4-209ENST00000507784 UHRF1BP1LA0JNW5 1464 aa27.01■■□□□ 1.91
RNF4-209ENST00000507784 LRRC9Q6ZRR7 1453 aa27■■□□□ 1.91
RNF4-209ENST00000507784 ATP10BO94823 1461 aa27■■□□□ 1.91
RNF4-209ENST00000507784 MTUS2Q5JR59 1369 aa26.99■■□□□ 1.91
RNF4-209ENST00000507784 CYB5RLQ6IPT4 315 aa26.99■■□□□ 1.91
RNF4-209ENST00000507784 CDK11AQ9UQ88 783 aaPredicted RBP26.99■■□□□ 1.91
RNF4-209ENST00000507784 ADCY10Q96PN6 1610 aa26.98■■□□□ 1.91
RNF4-209ENST00000507784 ZCCHC11Q5TAX3 1644 aaKnown RBP26.92■■□□□ 1.9
RNF4-209ENST00000507784 PLEKHD1A6NEE1 506 aa26.92■■□□□ 1.9
RNF4-209ENST00000507784 MAGI3Q5TCQ9 1506 aa26.91■■□□□ 1.9
RNF4-209ENST00000507784 EHBP1L1Q8N3D4 1523 aa26.91■■□□□ 1.9
RNF4-209ENST00000507784 NPM1P06748 294 aaKnown RBP eCLIP26.91■■□□□ 1.9
RNF4-209ENST00000507784 KDM5BQ9UGL1 1544 aa26.89■■□□□ 1.89
RNF4-209ENST00000507784 SUPT6HQ7KZ85 1726 aaKnown RBP26.85■■□□□ 1.89
RNF4-209ENST00000507784 TROQ12816 1431 aaPredicted RBP26.83■■□□□ 1.89
RNF4-209ENST00000507784 TRIM26Q12899 539 aaPredicted RBP26.8■■□□□ 1.88
RNF4-209ENST00000507784 NCOA2Q15596 1464 aa26.78■■□□□ 1.88
RNF4-209ENST00000507784 KCNH8Q96L42 1107 aa26.76■■□□□ 1.87
RNF4-209ENST00000507784 DNAJC5Q9H3Z4 198 aa26.75■■□□□ 1.87
RNF4-209ENST00000507784 KIF14Q15058 1648 aa26.74■■□□□ 1.87
RNF4-209ENST00000507784 PHLDB1Q86UU1 1377 aa26.72■■□□□ 1.87
RNF4-209ENST00000507784 ASXL2Q76L83 1435 aa26.7■■□□□ 1.86
RNF4-209ENST00000507784 CCNB3Q8WWL7 1395 aa26.68■■□□□ 1.86
RNF4-209ENST00000507784 WDR7Q9Y4E6 1490 aa26.68■■□□□ 1.86
RNF4-209ENST00000507784 PCGF6Q9BYE7 350 aa26.67■■□□□ 1.86
RNF4-209ENST00000507784 MYOM3Q5VTT5 1437 aa26.64■■□□□ 1.85
RNF4-209ENST00000507784 ABCC10Q5T3U5 1492 aa26.61■■□□□ 1.85
RNF4-209ENST00000507784 FAM50AQ14320 339 aaKnown RBP26.59■■□□□ 1.85
RNF4-209ENST00000507784 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.59■■□□□ 1.85
RNF4-209ENST00000507784 RRBP1Q9P2E9 1410 aaKnown RBP26.58■■□□□ 1.85
RNF4-209ENST00000507784 ITSN2Q9NZM3 1697 aa26.58■■□□□ 1.85
RNF4-209ENST00000507784 MAPKBP1O60336 1514 aa26.58■■□□□ 1.85
RNF4-209ENST00000507784 FGD6Q6ZV73 1430 aa26.57■■□□□ 1.84
RNF4-209ENST00000507784 CDC42BPAQ5VT25 1732 aa26.56■■□□□ 1.84
RNF4-209ENST00000507784 TTC37Q6PGP7 1564 aa26.56■■□□□ 1.84
RNF4-209ENST00000507784 GPATCH8Q9UKJ3 1502 aaKnown RBP26.55■■□□□ 1.84
RNF4-209ENST00000507784 CFDP1Q9UEE9 299 aaPredicted RBP26.54■■□□□ 1.84
RNF4-209ENST00000507784 PTPN23Q9H3S7 1636 aa26.53■■□□□ 1.84
RNF4-209ENST00000507784 MIA2Q96PC5 1412 aa26.52■■□□□ 1.84
RNF4-209ENST00000507784 MYO5CQ9NQX4 1742 aa26.52■■□□□ 1.84
RNF4-209ENST00000507784 ZNF777Q9ULD5 760 aaPredicted RBP26.52■■□□□ 1.84
RNF4-209ENST00000507784 ITGAEP38570 1179 aa26.49■■□□□ 1.83
RNF4-209ENST00000507784 ABCA9Q8IUA7 1624 aa26.48■■□□□ 1.83
RNF4-209ENST00000507784 CDC42BPBQ9Y5S2 1711 aa26.48■■□□□ 1.83
RNF4-209ENST00000507784 PREX2Q70Z35 1606 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms