RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 DHX57Q6P158 1386 aaKnown RBP32.54■■■□□ 2.8
SPCS3-203ENST00000507678 TIAM1Q13009 1591 aa32.51■■■□□ 2.8
SPCS3-203ENST00000507678 PDS5BQ9NTI5 1447 aa32.47■■■□□ 2.79
SPCS3-203ENST00000507678 FHAD1B1AJZ9 1412 aa32.46■■■□□ 2.79
SPCS3-203ENST00000507678 FAM50AQ14320 339 aaKnown RBP32.45■■■□□ 2.79
SPCS3-203ENST00000507678 LRRC9Q6ZRR7 1453 aa32.43■■■□□ 2.78
SPCS3-203ENST00000507678 PCF11O94913 1555 aaKnown RBP32.43■■■□□ 2.78
SPCS3-203ENST00000507678 PHLDB1Q86UU1 1377 aa32.4■■■□□ 2.78
SPCS3-203ENST00000507678 CUL7Q14999 1698 aa32.38■■■□□ 2.77
SPCS3-203ENST00000507678 NEUROD1Q13562 356 aa32.37■■■□□ 2.77
SPCS3-203ENST00000507678 GAPVD1Q14C86 1478 aa32.35■■■□□ 2.77
SPCS3-203ENST00000507678 KIF21AQ7Z4S6 1674 aa32.35■■■□□ 2.77
SPCS3-203ENST00000507678 MAP3K1Q13233 1512 aa32.32■■■□□ 2.76
SPCS3-203ENST00000507678 CLSPNQ9HAW4 1339 aa32.31■■■□□ 2.76
SPCS3-203ENST00000507678 ACIN1Q9UKV3 1341 aaKnown RBP32.31■■■□□ 2.76
SPCS3-203ENST00000507678 YTHDC1Q96MU7 727 aaKnown RBP32.3■■■□□ 2.76
SPCS3-203ENST00000507678 WDR97A6NE52 1622 aa32.3■■■□□ 2.76
SPCS3-203ENST00000507678 RAB3GAP2Q9H2M9 1393 aa32.28■■■□□ 2.76
SPCS3-203ENST00000507678 CTTNBP2Q8WZ74 1663 aa32.28■■■□□ 2.76
SPCS3-203ENST00000507678 MIER1Q8N108 512 aa32.27■■■□□ 2.76
SPCS3-203ENST00000507678 MYT1Q01538 1121 aa32.26■■■□□ 2.76
SPCS3-203ENST00000507678 EFCAB5A4FU69 1503 aa32.25■■■□□ 2.75
SPCS3-203ENST00000507678 ABCA5Q8WWZ7 1642 aa32.24■■■□□ 2.75
SPCS3-203ENST00000507678 CENPBP07199 599 aaPredicted RBP32.22■■■□□ 2.75
SPCS3-203ENST00000507678 CFAP43Q8NDM7 1665 aa32.21■■■□□ 2.75
SPCS3-203ENST00000507678 FYCO1Q9BQS8 1478 aa32.21■■■□□ 2.75
SPCS3-203ENST00000507678 CASKIN1Q8WXD9 1431 aa32.21■■■□□ 2.75
SPCS3-203ENST00000507678 FMN1Q68DA7 1419 aa32.16■■■□□ 2.74
SPCS3-203ENST00000507678 SETD5Q9C0A6 1442 aa32.13■■■□□ 2.73
SPCS3-203ENST00000507678 AQRO60306 1485 aaKnown RBP eCLIP32.12■■■□□ 2.733e-9■■■■■ 35.5
SPCS3-203ENST00000507678 MTUS2Q5JR59 1369 aa32.1■■■□□ 2.73
SPCS3-203ENST00000507678 TARBP1Q13395 1621 aaKnown RBP32.08■■■□□ 2.73
SPCS3-203ENST00000507678 SNAPC4Q5SXM2 1469 aa32.05■■■□□ 2.72
SPCS3-203ENST00000507678 GTF3C3Q9Y5Q9 886 aa32.02■■■□□ 2.72
SPCS3-203ENST00000507678 ARID3CA6NKF2 412 aa32.01■■■□□ 2.71
SPCS3-203ENST00000507678 SIN3AQ96ST3 1273 aa32■■■□□ 2.71
SPCS3-203ENST00000507678 MAPKBP1O60336 1514 aa31.98■■■□□ 2.71
SPCS3-203ENST00000507678 SAMD9Q5K651 1589 aa31.98■■■□□ 2.71
SPCS3-203ENST00000507678 MRC2Q9UBG0 1479 aa31.96■■■□□ 2.71
SPCS3-203ENST00000507678 FGD6Q6ZV73 1430 aa31.93■■■□□ 2.7
SPCS3-203ENST00000507678 PBRM1Q86U86 1689 aa31.91■■■□□ 2.7
SPCS3-203ENST00000507678 LRRIQ1Q96JM4 1722 aa31.89■■■□□ 2.7
SPCS3-203ENST00000507678 GRIN2BQ13224 1484 aa31.88■■■□□ 2.69
SPCS3-203ENST00000507678 ZNF608Q9ULD9 1512 aaPredicted RBP31.87■■■□□ 2.69
SPCS3-203ENST00000507678 NCOA2Q15596 1464 aa31.84■■■□□ 2.69
SPCS3-203ENST00000507678 ADAMTS12P58397 1594 aa31.79■■■□□ 2.68
SPCS3-203ENST00000507678 IQGAP2Q13576 1575 aa31.78■■■□□ 2.68
SPCS3-203ENST00000507678 PTPRKQ15262 1439 aa31.78■■■□□ 2.68
SPCS3-203ENST00000507678 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.76■■■□□ 2.683e-8■□□□□ 11
SPCS3-203ENST00000507678 MYOM3Q5VTT5 1437 aa31.75■■■□□ 2.67
SPCS3-203ENST00000507678 CHIC2Q9UKJ5 165 aa31.73■■■□□ 2.67
SPCS3-203ENST00000507678 MAGI3Q5TCQ9 1506 aa31.73■■■□□ 2.67
SPCS3-203ENST00000507678 ERCC6Q03468 1493 aa31.7■■■□□ 2.67
SPCS3-203ENST00000507678 IFT140Q96RY7 1462 aa31.7■■■□□ 2.67
SPCS3-203ENST00000507678 SUPT6HQ7KZ85 1726 aaKnown RBP31.7■■■□□ 2.67
SPCS3-203ENST00000507678 EHBP1L1Q8N3D4 1523 aa31.7■■■□□ 2.66
SPCS3-203ENST00000507678 CCDC18Q5T9S5 1454 aa31.68■■■□□ 2.66
SPCS3-203ENST00000507678 CDK13Q14004 1512 aaKnown RBP31.68■■■□□ 2.66
SPCS3-203ENST00000507678 RRP7BPQ9NSQ0 103 aa31.67■■■□□ 2.66
SPCS3-203ENST00000507678 THOC2Q8NI27 1593 aaKnown RBP31.67■■■□□ 2.66
SPCS3-203ENST00000507678 FBLN2P98095 1184 aa31.66■■■□□ 2.66
SPCS3-203ENST00000507678 HIRIP3Q9BW71 556 aaPredicted RBP31.66■■■□□ 2.66
SPCS3-203ENST00000507678 WDR62O43379 1518 aa31.63■■■□□ 2.65
SPCS3-203ENST00000507678 EPRSP07814 1512 aaKnown RBP31.62■■■□□ 2.65
SPCS3-203ENST00000507678 HECW1Q76N89 1606 aa31.62■■■□□ 2.65
SPCS3-203ENST00000507678 HFM1A2PYH4 1435 aa31.6■■■□□ 2.65
SPCS3-203ENST00000507678 UGGT2Q9NYU1 1516 aa31.6■■■□□ 2.65
SPCS3-203ENST00000507678 PTPN23Q9H3S7 1636 aa31.59■■■□□ 2.65
SPCS3-203ENST00000507678 NAIPQ13075 1403 aa31.57■■■□□ 2.64
SPCS3-203ENST00000507678 CHMP7Q8WUX9 453 aaPredicted RBP31.54■■■□□ 2.64
SPCS3-203ENST00000507678 EIF4G3O43432 1585 aaKnown RBP31.53■■■□□ 2.64
SPCS3-203ENST00000507678 DDX10Q13206 875 aaKnown RBP31.52■■■□□ 2.64
SPCS3-203ENST00000507678 PPP1R15AO75807 674 aaPredicted RBP31.52■■■□□ 2.64
SPCS3-203ENST00000507678 TONSLQ96HA7 1378 aa31.51■■■□□ 2.64
SPCS3-203ENST00000507678 TRIM52Q96A61 297 aa31.51■■■□□ 2.63
SPCS3-203ENST00000507678 UACAQ9BZF9 1416 aa31.51■■■□□ 2.63
SPCS3-203ENST00000507678 KIAA0586Q9BVV6 1533 aa31.49■■■□□ 2.63
SPCS3-203ENST00000507678 GRIN2AQ12879 1464 aa31.49■■■□□ 2.63
SPCS3-203ENST00000507678 ARHGEF11O15085 1522 aa31.49■■■□□ 2.63
SPCS3-203ENST00000507678 DISP1Q96F81 1524 aa31.46■■■□□ 2.63
SPCS3-203ENST00000507678 TIMELESSQ9UNS1 1208 aa31.46■■■□□ 2.63
SPCS3-203ENST00000507678 KCNH8Q96L42 1107 aa31.43■■■□□ 2.62
SPCS3-203ENST00000507678 KIAA0556O60303 1618 aa31.43■■■□□ 2.62
SPCS3-203ENST00000507678 ZNF644Q9H582 1327 aaPredicted RBP31.38■■■□□ 2.61
SPCS3-203ENST00000507678 TCOF1Q13428 1488 aaKnown RBP31.36■■■□□ 2.61
SPCS3-203ENST00000507678 NUP153P49790 1475 aaKnown RBP31.35■■■□□ 2.61
SPCS3-203ENST00000507678 FOXD1Q16676 465 aa31.32■■■□□ 2.6
SPCS3-203ENST00000507678 CDK11AQ9UQ88 783 aaPredicted RBP31.31■■■□□ 2.6
SPCS3-203ENST00000507678 MIA2Q96PC5 1412 aa31.31■■■□□ 2.6
SPCS3-203ENST00000507678 KDM6BO15054 1643 aa31.3■■■□□ 2.6
SPCS3-203ENST00000507678 MAGI1Q96QZ7 1491 aaPredicted RBP31.28■■■□□ 2.6
SPCS3-203ENST00000507678 CEP170Q5SW79 1584 aa31.28■■■□□ 2.6
SPCS3-203ENST00000507678 RAPGEF6Q8TEU7 1601 aa31.28■■■□□ 2.6
SPCS3-203ENST00000507678 PLB1Q6P1J6 1458 aa31.28■■■□□ 2.6
SPCS3-203ENST00000507678 SYNJ2O15056 1496 aa31.27■■■□□ 2.6
SPCS3-203ENST00000507678 JPH4Q96JJ6 628 aa31.26■■■□□ 2.6
SPCS3-203ENST00000507678 PRG4Q92954 1404 aaPredicted RBP31.26■■■□□ 2.59
SPCS3-203ENST00000507678 ZNF777Q9ULD5 760 aaPredicted RBP31.26■■■□□ 2.59
SPCS3-203ENST00000507678 MPHOSPH9Q99550 1183 aa31.23■■■□□ 2.59
SPCS3-203ENST00000507678 DAPK1P53355 1430 aa31.19■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms