RNA–Protein interactions for RNA: ENST00000507650.1

HOXC4-203, Transcript of homeobox C4, humanhuman

TSL 3

Gene HOXC4, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-203ENST00000507650 TRHP20396 242 aaPredicted RBP28.02■■■□□ 2.08
HOXC4-203ENST00000507650 JPH4Q96JJ6 628 aa27.99■■■□□ 2.07
HOXC4-203ENST00000507650 KIAA0586Q9BVV6 1533 aa27.97■■■□□ 2.07
HOXC4-203ENST00000507650 CARMIL1Q5VZK9 1371 aa27.93■■■□□ 2.06
HOXC4-203ENST00000507650 KIF13AQ9H1H9 1805 aa27.85■■■□□ 2.05
HOXC4-203ENST00000507650 ADCY10Q96PN6 1610 aa27.85■■■□□ 2.05
HOXC4-203ENST00000507650 IQGAP2Q13576 1575 aa27.8■■■□□ 2.04
HOXC4-203ENST00000507650 RAPGEF2Q9Y4G8 1499 aa27.74■■■□□ 2.03
HOXC4-203ENST00000507650 DISP1Q96F81 1524 aa27.68■■■□□ 2.02
HOXC4-203ENST00000507650 CTTNBP2Q8WZ74 1663 aa27.68■■■□□ 2.02
HOXC4-203ENST00000507650 MAPKBP1O60336 1514 aa27.67■■■□□ 2.02
HOXC4-203ENST00000507650 UGGT2Q9NYU1 1516 aa27.64■■■□□ 2.02
HOXC4-203ENST00000507650 DIP2BQ9P265 1576 aa27.62■■■□□ 2.01
HOXC4-203ENST00000507650 PRXQ9BXM0 1461 aa27.6■■■□□ 2.01
HOXC4-203ENST00000507650 PTPRGP23470 1445 aa27.59■■■□□ 2.01
HOXC4-203ENST00000507650 KIAA0556O60303 1618 aa27.59■■■□□ 2.01
HOXC4-203ENST00000507650 TNIKQ9UKE5 1360 aa27.59■■■□□ 2.01
HOXC4-203ENST00000507650 ABCC10Q5T3U5 1492 aa27.58■■■□□ 2.01
HOXC4-203ENST00000507650 CARMIL2Q6F5E8 1435 aa27.58■■■□□ 2
HOXC4-203ENST00000507650 TTBK1Q5TCY1 1321 aaPredicted RBP27.5■■□□□ 1.99
HOXC4-203ENST00000507650 ABCC2Q92887 1545 aa27.49■■□□□ 1.99
HOXC4-203ENST00000507650 UHRF1BP1LA0JNW5 1464 aa27.48■■□□□ 1.99
HOXC4-203ENST00000507650 TSPOAP1O95153 1857 aa27.45■■□□□ 1.99
HOXC4-203ENST00000507650 NPM1P06748 294 aaKnown RBP eCLIP27.45■■□□□ 1.98
HOXC4-203ENST00000507650 UACAQ9BZF9 1416 aa27.43■■□□□ 1.98
HOXC4-203ENST00000507650 FAM69CQ0P6D2 419 aa27.43■■□□□ 1.98
HOXC4-203ENST00000507650 ZCCHC11Q5TAX3 1644 aaKnown RBP27.41■■□□□ 1.98
HOXC4-203ENST00000507650 KDM5BQ9UGL1 1544 aa27.38■■□□□ 1.97
HOXC4-203ENST00000507650 PPRC1Q5VV67 1664 aaKnown RBP27.37■■□□□ 1.97
HOXC4-203ENST00000507650 ASXL2Q76L83 1435 aa27.36■■□□□ 1.97
HOXC4-203ENST00000507650 PLB1Q6P1J6 1458 aa27.33■■□□□ 1.97
HOXC4-203ENST00000507650 ABCA8O94911 1581 aa27.32■■□□□ 1.96
HOXC4-203ENST00000507650 GLI2P10070 1586 aa27.31■■□□□ 1.96
HOXC4-203ENST00000507650 GOLGA3Q08378 1498 aa27.31■■□□□ 1.96
HOXC4-203ENST00000507650 CSRNP3Q8WYN3 585 aa27.3■■□□□ 1.96
HOXC4-203ENST00000507650 SAMD9Q5K651 1589 aa27.26■■□□□ 1.96
HOXC4-203ENST00000507650 EEA1Q15075 1411 aa27.24■■□□□ 1.95
HOXC4-203ENST00000507650 MAP3K4Q9Y6R4 1608 aa27.24■■□□□ 1.95
HOXC4-203ENST00000507650 KDM6BO15054 1643 aa27.23■■□□□ 1.95
HOXC4-203ENST00000507650 EPRSP07814 1512 aaKnown RBP27.23■■□□□ 1.95
HOXC4-203ENST00000507650 KIF21BO75037 1637 aa27.18■■□□□ 1.94
HOXC4-203ENST00000507650 WDR7Q9Y4E6 1490 aa27.14■■□□□ 1.94
HOXC4-203ENST00000507650 FAM9AQ8IZU1 332 aaPredicted RBP27.13■■□□□ 1.93
HOXC4-203ENST00000507650 CHIC1Q5VXU3 224 aa27.11■■□□□ 1.93
HOXC4-203ENST00000507650 P3H3Q8IVL6 736 aa27.11■■□□□ 1.93
HOXC4-203ENST00000507650 RAPGEF6Q8TEU7 1601 aa27.06■■□□□ 1.92
HOXC4-203ENST00000507650 COL17A1Q9UMD9 1497 aaPredicted RBP27.06■■□□□ 1.92
HOXC4-203ENST00000507650 CFAP43Q8NDM7 1665 aa27.04■■□□□ 1.92
HOXC4-203ENST00000507650 ATP10BO94823 1461 aa27.03■■□□□ 1.92
HOXC4-203ENST00000507650 FHOD3Q2V2M9 1422 aa27■■□□□ 1.91
HOXC4-203ENST00000507650 ARID3CA6NKF2 412 aa26.97■■□□□ 1.91
HOXC4-203ENST00000507650 NUP153P49790 1475 aaKnown RBP26.95■■□□□ 1.91
HOXC4-203ENST00000507650 TEX14Q8IWB6 1497 aa26.94■■□□□ 1.9
HOXC4-203ENST00000507650 RANGAP1P46060 587 aaPredicted RBP26.94■■□□□ 1.9
HOXC4-203ENST00000507650 EFCAB5A4FU69 1503 aa26.94■■□□□ 1.9
HOXC4-203ENST00000507650 MAGI3Q5TCQ9 1506 aa26.92■■□□□ 1.9
HOXC4-203ENST00000507650 AEBP2Q6ZN18 517 aaPredicted RBP26.9■■□□□ 1.9
HOXC4-203ENST00000507650 KCNH8Q96L42 1107 aa26.9■■□□□ 1.9
HOXC4-203ENST00000507650 ABCA9Q8IUA7 1624 aa26.9■■□□□ 1.9
HOXC4-203ENST00000507650 CD109Q6YHK3 1445 aa26.89■■□□□ 1.89
HOXC4-203ENST00000507650 EHMT2Q96KQ7 1210 aa26.85■■□□□ 1.89
HOXC4-203ENST00000507650 KDM4FA0A1W2PPD8 638 aa26.82■■□□□ 1.88
HOXC4-203ENST00000507650 ARHGAP35Q9NRY4 1499 aa26.8■■□□□ 1.88
HOXC4-203ENST00000507650 CDK13Q14004 1512 aaKnown RBP26.75■■□□□ 1.87
HOXC4-203ENST00000507650 LRRIQ1Q96JM4 1722 aa26.74■■□□□ 1.87
HOXC4-203ENST00000507650 UBTFP17480 764 aaKnown RBP26.72■■□□□ 1.87
HOXC4-203ENST00000507650 ARAP3Q8WWN8 1544 aa26.71■■□□□ 1.87
HOXC4-203ENST00000507650 ADGRL1O94910 1474 aa26.69■■□□□ 1.86
HOXC4-203ENST00000507650 TTC37Q6PGP7 1564 aa26.69■■□□□ 1.86
HOXC4-203ENST00000507650 FRMPD1Q5SYB0 1578 aa26.67■■□□□ 1.86
HOXC4-203ENST00000507650 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.67■■□□□ 1.86
HOXC4-203ENST00000507650 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.65■■□□□ 1.86
HOXC4-203ENST00000507650 HNRNPUL2Q1KMD3 747 aaKnown RBP26.65■■□□□ 1.86
HOXC4-203ENST00000507650 HECW1Q76N89 1606 aa26.65■■□□□ 1.86
HOXC4-203ENST00000507650 NEO1Q92859 1461 aa26.61■■□□□ 1.85
HOXC4-203ENST00000507650 FMN1Q68DA7 1419 aa26.6■■□□□ 1.85
HOXC4-203ENST00000507650 RICTORQ6R327 1708 aa26.58■■□□□ 1.85
HOXC4-203ENST00000507650 PCF11O94913 1555 aaKnown RBP26.55■■□□□ 1.84
HOXC4-203ENST00000507650 KIF14Q15058 1648 aa26.55■■□□□ 1.84
HOXC4-203ENST00000507650 PLEKHD1A6NEE1 506 aa26.55■■□□□ 1.84
HOXC4-203ENST00000507650 PHLDB1Q86UU1 1377 aa26.53■■□□□ 1.84
HOXC4-203ENST00000507650 CFAP74Q9C0B2 1584 aa26.51■■□□□ 1.83
HOXC4-203ENST00000507650 RAPGEF3O95398 923 aa26.51■■□□□ 1.83
HOXC4-203ENST00000507650 FANCAO15360 1455 aa26.49■■□□□ 1.83
HOXC4-203ENST00000507650 MYO5CQ9NQX4 1742 aa26.48■■□□□ 1.83
HOXC4-203ENST00000507650 AKNAQ7Z591 1439 aa26.46■■□□□ 1.83
HOXC4-203ENST00000507650 SIGLEC1Q9BZZ2 1709 aa26.44■■□□□ 1.82
HOXC4-203ENST00000507650 ATP1B4Q9UN42 357 aaPredicted RBP26.43■■□□□ 1.82
HOXC4-203ENST00000507650 ARHGEF40Q8TER5 1519 aa26.43■■□□□ 1.82
HOXC4-203ENST00000507650 CASKIN1Q8WXD9 1431 aa26.41■■□□□ 1.82
HOXC4-203ENST00000507650 ADAMTSL3P82987 1691 aa26.41■■□□□ 1.82
HOXC4-203ENST00000507650 PLCH2O75038 1416 aa26.4■■□□□ 1.82
HOXC4-203ENST00000507650 TROQ12816 1431 aaPredicted RBP26.4■■□□□ 1.82
HOXC4-203ENST00000507650 DENND4BO75064 1496 aaPredicted RBP26.4■■□□□ 1.82
HOXC4-203ENST00000507650 ZMYM4Q5VZL5 1548 aa26.39■■□□□ 1.82
HOXC4-203ENST00000507650 CDC42BPBQ9Y5S2 1711 aa26.38■■□□□ 1.81
HOXC4-203ENST00000507650 BCORL1Q5H9F3 1711 aa26.37■■□□□ 1.81
HOXC4-203ENST00000507650 CLIP1P30622 1438 aa26.37■■□□□ 1.81
HOXC4-203ENST00000507650 FYCO1Q9BQS8 1478 aa26.35■■□□□ 1.81
HOXC4-203ENST00000507650 CCDC18Q5T9S5 1454 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms