RNA–Protein interactions for RNA: ENST00000507638.1

VEGFC-201, Transcript of vascular endothelial growth factor C, humanhuman

TSL 3

Gene VEGFC, Length 759 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-201ENST00000507638 KIF21AQ7Z4S6 1674 aa11.59□□□□□ -0.55
VEGFC-201ENST00000507638 ARHGEF11O15085 1522 aa11.58□□□□□ -0.56
VEGFC-201ENST00000507638 FXR2P51116 673 aaKnown RBP eCLIP11.54□□□□□ -0.56
VEGFC-201ENST00000507638 PLEKHG5O94827 1062 aa11.52□□□□□ -0.57
VEGFC-201ENST00000507638 PDS5BQ9NTI5 1447 aa11.5□□□□□ -0.57
VEGFC-201ENST00000507638 LAMC3Q9Y6N6 1575 aa11.49□□□□□ -0.57
VEGFC-201ENST00000507638 DCAF1Q9Y4B6 1507 aa11.46□□□□□ -0.57
VEGFC-201ENST00000507638 PIP4P2Q8N4L2 257 aa11.46□□□□□ -0.57
VEGFC-201ENST00000507638 ATAD2BQ9ULI0 1458 aa11.44□□□□□ -0.58
VEGFC-201ENST00000507638 ZBTB47Q9UFB7 747 aaPredicted RBP11.44□□□□□ -0.58
VEGFC-201ENST00000507638 MRC2Q9UBG0 1479 aa11.43□□□□□ -0.58
VEGFC-201ENST00000507638 PRKAR2AP13861 404 aaKnown RBP11.41□□□□□ -0.58
VEGFC-201ENST00000507638 WDR62O43379 1518 aa11.4□□□□□ -0.58
VEGFC-201ENST00000507638 ARAP1Q96P48 1450 aa11.4□□□□□ -0.58
VEGFC-201ENST00000507638 MIER1Q8N108 512 aa11.38□□□□□ -0.59
VEGFC-201ENST00000507638 HMGXB3Q12766 1538 aa11.37□□□□□ -0.59
VEGFC-201ENST00000507638 PLCD3Q8N3E9 789 aa11.37□□□□□ -0.59
VEGFC-201ENST00000507638 ZCCHC6Q5VYS8 1495 aaKnown RBP11.37□□□□□ -0.59
VEGFC-201ENST00000507638 VASPP50552 380 aaPredicted RBP11.36□□□□□ -0.59
VEGFC-201ENST00000507638 CREBZFQ9NS37 354 aa11.35□□□□□ -0.59
VEGFC-201ENST00000507638 NPM1P06748 294 aaKnown RBP eCLIP11.34□□□□□ -0.59
VEGFC-201ENST00000507638 FARP1Q9Y4F1 1045 aaPredicted RBP11.3□□□□□ -0.6
VEGFC-201ENST00000507638 KDM4FA0A1W2PPD8 638 aa11.29□□□□□ -0.6
VEGFC-201ENST00000507638 BAZ1BQ9UIG0 1483 aaKnown RBP11.27□□□□□ -0.6
VEGFC-201ENST00000507638 CHADLQ6NUI6 762 aa11.27□□□□□ -0.61
VEGFC-201ENST00000507638 SP7Q8TDD2 431 aaPredicted RBP11.25□□□□□ -0.61
VEGFC-201ENST00000507638 FBXO41Q8TF61 875 aa11.25□□□□□ -0.61
VEGFC-201ENST00000507638 CADPSQ9ULU8 1353 aa11.25□□□□□ -0.61
VEGFC-201ENST00000507638 LMTK3Q96Q04 1460 aa11.25□□□□□ -0.61
VEGFC-201ENST00000507638 SOCS7O14512 581 aa11.24□□□□□ -0.61
VEGFC-201ENST00000507638 MNX1P50219 401 aaPredicted RBP11.21□□□□□ -0.61
VEGFC-201ENST00000507638 KLHL34Q8N239 644 aa11.2□□□□□ -0.62
VEGFC-201ENST00000507638 PAK3O75914 559 aaPredicted RBP11.19□□□□□ -0.62
VEGFC-201ENST00000507638 CEP164Q9UPV0 1460 aa11.19□□□□□ -0.62
VEGFC-201ENST00000507638 ILDR2Q71H61 639 aa11.18□□□□□ -0.62
VEGFC-201ENST00000507638 RSF1Q96T23 1441 aaPredicted RBP11.17□□□□□ -0.62
VEGFC-201ENST00000507638 HAX1O00165 279 aa11.15□□□□□ -0.62
VEGFC-201ENST00000507638 SMARCA4P51532 1647 aa11.15□□□□□ -0.62
VEGFC-201ENST00000507638 C19orf67A6NJJ6 358 aa11.14□□□□□ -0.63
VEGFC-201ENST00000507638 CLCN6P51797 869 aa11.14□□□□□ -0.63
VEGFC-201ENST00000507638 SPOCK2Q92563 424 aa11.13□□□□□ -0.63
VEGFC-201ENST00000507638 ZNF608Q9ULD9 1512 aaPredicted RBP11.13□□□□□ -0.63
VEGFC-201ENST00000507638 IFNLR1Q8IU57 520 aaPredicted RBP11.12□□□□□ -0.63
VEGFC-201ENST00000507638 FANCD2Q9BXW9 1451 aa11.11□□□□□ -0.63
VEGFC-201ENST00000507638 CHD1O14646 1710 aa11.1□□□□□ -0.63
VEGFC-201ENST00000507638 ERCC6L2Q5T890 1561 aa11.09□□□□□ -0.63
VEGFC-201ENST00000507638 CD44P16070 742 aaKnown RBP11.09□□□□□ -0.63
VEGFC-201ENST00000507638 FAM212AQ96EL1 285 aa11.09□□□□□ -0.63
VEGFC-201ENST00000507638 URB2Q14146 1524 aaKnown RBP11.08□□□□□ -0.64
VEGFC-201ENST00000507638 GSE1Q14687 1217 aa11.06□□□□□ -0.64
VEGFC-201ENST00000507638 NUBP1P53384 320 aa11.05□□□□□ -0.64
VEGFC-201ENST00000507638 HECW2Q9P2P5 1572 aa11.03□□□□□ -0.64
VEGFC-201ENST00000507638 ZRANB1Q9UGI0 708 aa11.01□□□□□ -0.65
VEGFC-201ENST00000507638 DISP3Q9P2K9 1392 aa11.01□□□□□ -0.65
VEGFC-201ENST00000507638 PEG3Q9GZU2 1588 aa11□□□□□ -0.65
VEGFC-201ENST00000507638 ZNF579Q8NAF0 562 aaKnown RBP11□□□□□ -0.65
VEGFC-201ENST00000507638 IFT140Q96RY7 1462 aa11□□□□□ -0.65
VEGFC-201ENST00000507638 RASEFQ8IZ41 740 aa10.98□□□□□ -0.65
VEGFC-201ENST00000507638 DCAF8Q5TAQ9 597 aa10.96□□□□□ -0.65
VEGFC-201ENST00000507638 TSPYL2Q9H2G4 693 aaPredicted RBP10.95□□□□□ -0.66
VEGFC-201ENST00000507638 KIF13AQ9H1H9 1805 aa10.95□□□□□ -0.66
VEGFC-201ENST00000507638 EIF4G3O43432 1585 aaKnown RBP10.94□□□□□ -0.66
VEGFC-201ENST00000507638 SYNJ2O15056 1496 aa10.94□□□□□ -0.66
VEGFC-201ENST00000507638 AQRO60306 1485 aaKnown RBP eCLIP10.94□□□□□ -0.66
VEGFC-201ENST00000507638 CCDC61Q9Y6R9 512 aa10.94□□□□□ -0.66
VEGFC-201ENST00000507638 GAPVD1Q14C86 1478 aa10.93□□□□□ -0.66
VEGFC-201ENST00000507638 SGIP1Q9BQI5 828 aa10.93□□□□□ -0.66
VEGFC-201ENST00000507638 CHRM1P11229 460 aaPredicted RBP10.91□□□□□ -0.66
VEGFC-201ENST00000507638 CLASP1Q7Z460 1538 aa10.9□□□□□ -0.66
VEGFC-201ENST00000507638 CIZ1Q9ULV3 898 aaPredicted RBP10.89□□□□□ -0.67
VEGFC-201ENST00000507638 FAM69CQ0P6D2 419 aa10.88□□□□□ -0.67
VEGFC-201ENST00000507638 CHMP7Q8WUX9 453 aaPredicted RBP10.87□□□□□ -0.67
VEGFC-201ENST00000507638 CFTRP13569 1480 aa10.87□□□□□ -0.67
VEGFC-201ENST00000507638 EVX2Q03828 476 aa10.86□□□□□ -0.67
VEGFC-201ENST00000507638 ADGRL1O94910 1474 aa10.86□□□□□ -0.67
VEGFC-201ENST00000507638 MROH2BQ7Z745 1585 aa10.86□□□□□ -0.67
VEGFC-201ENST00000507638 KDM6BO15054 1643 aa10.84□□□□□ -0.67
VEGFC-201ENST00000507638 KIF12Q96FN5 646 aa10.83□□□□□ -0.68
VEGFC-201ENST00000507638 SYNJ1O43426 1573 aa10.82□□□□□ -0.68
VEGFC-201ENST00000507638 GABBR2O75899 941 aa10.81□□□□□ -0.68
VEGFC-201ENST00000507638 ZNF467Q7Z7K2 595 aaPredicted RBP10.81□□□□□ -0.68
VEGFC-201ENST00000507638 PHF12Q96QT6 1004 aa10.81□□□□□ -0.68
VEGFC-201ENST00000507638 TAOK2Q9UL54 1235 aa10.81□□□□□ -0.68
VEGFC-201ENST00000507638 AMER1Q5JTC6 1135 aaPredicted RBP10.79□□□□□ -0.68
VEGFC-201ENST00000507638 PCDHB13Q9Y5F0 798 aa10.78□□□□□ -0.68
VEGFC-201ENST00000507638 TOPBP1Q92547 1522 aa10.78□□□□□ -0.68
VEGFC-201ENST00000507638 MAP3K13O43283 966 aa10.76□□□□□ -0.69
VEGFC-201ENST00000507638 PYGBP11216 843 aa10.76□□□□□ -0.69
VEGFC-201ENST00000507638 TSPOAP1O95153 1857 aa10.74□□□□□ -0.69
VEGFC-201ENST00000507638 ABCC10Q5T3U5 1492 aa10.74□□□□□ -0.69
VEGFC-201ENST00000507638 TARBP1Q13395 1621 aaKnown RBP10.73□□□□□ -0.69
VEGFC-201ENST00000507638 TDRD9Q8NDG6 1382 aaKnown RBP10.73□□□□□ -0.69
VEGFC-201ENST00000507638 SNAPC4Q5SXM2 1469 aa10.73□□□□□ -0.69
VEGFC-201ENST00000507638 ECM2O94769 699 aaPredicted RBP10.72□□□□□ -0.69
VEGFC-201ENST00000507638 PKD2Q13563 968 aa10.71□□□□□ -0.69
VEGFC-201ENST00000507638 MS4A3Q96HJ5 214 aa10.71□□□□□ -0.69
VEGFC-201ENST00000507638 DCBLD2Q96PD2 775 aa10.71□□□□□ -0.69
VEGFC-201ENST00000507638 TIE1P35590 1138 aa10.7□□□□□ -0.7
VEGFC-201ENST00000507638 GALR2O43603 387 aaPredicted RBP10.69□□□□□ -0.7
VEGFC-201ENST00000507638 WIZO95785 1651 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms