RNA–Protein interactions for RNA: ENST00000507489.1

NFXL1-206, Transcript of nuclear transcription factor, X-box binding like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFXL1, Length 3,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFXL1-206ENST00000507489 CARMIL1Q5VZK9 1371 aa16.5■□□□□ 0.23
NFXL1-206ENST00000507489 CCNB3Q8WWL7 1395 aa16.48■□□□□ 0.23
NFXL1-206ENST00000507489 SENP3Q9H4L4 574 aaPredicted RBP16.48■□□□□ 0.23
NFXL1-206ENST00000507489 DAXXQ9UER7 740 aaPredicted RBP16.46■□□□□ 0.23
NFXL1-206ENST00000507489 ATAD2BQ9ULI0 1458 aa16.46■□□□□ 0.23
NFXL1-206ENST00000507489 FOXD1Q16676 465 aa16.45■□□□□ 0.22
NFXL1-206ENST00000507489 CHMP7Q8WUX9 453 aaPredicted RBP16.45■□□□□ 0.22
NFXL1-206ENST00000507489 CDK11AQ9UQ88 783 aaPredicted RBP16.45■□□□□ 0.22
NFXL1-206ENST00000507489 TDRD9Q8NDG6 1382 aaKnown RBP16.44■□□□□ 0.22
NFXL1-206ENST00000507489 KCNH8Q96L42 1107 aa16.44■□□□□ 0.22
NFXL1-206ENST00000507489 SMARCA2P51531 1590 aa16.42■□□□□ 0.22
NFXL1-206ENST00000507489 MRS2Q9HD23 443 aa16.39■□□□□ 0.21
NFXL1-206ENST00000507489 RGL3Q3MIN7 710 aa16.37■□□□□ 0.21
NFXL1-206ENST00000507489 PLPPR3Q6T4P5 718 aa16.36■□□□□ 0.21
NFXL1-206ENST00000507489 RAB3GAP2Q9H2M9 1393 aa16.35■□□□□ 0.21
NFXL1-206ENST00000507489 BCL11AQ9H165 835 aa16.34■□□□□ 0.21
NFXL1-206ENST00000507489 EIF4G2P78344 907 aaKnown RBP eCLIP16.32■□□□□ 0.2
NFXL1-206ENST00000507489 CHGAP10645 457 aaKnown RBP16.32■□□□□ 0.2
NFXL1-206ENST00000507489 FHOD3Q2V2M9 1422 aa16.31■□□□□ 0.2
NFXL1-206ENST00000507489 SUPT16HQ9Y5B9 1047 aaKnown RBP16.3■□□□□ 0.2
NFXL1-206ENST00000507489 CLSPNQ9HAW4 1339 aa16.3■□□□□ 0.2
NFXL1-206ENST00000507489 EIF4G1Q04637 1599 aaKnown RBP16.29■□□□□ 0.2
NFXL1-206ENST00000507489 TSPY4P0CV99 314 aa16.29■□□□□ 0.2
NFXL1-206ENST00000507489 TSPY10P0CW01 314 aa16.29■□□□□ 0.2
NFXL1-206ENST00000507489 NPM2Q86SE8 214 aaKnown RBP16.29■□□□□ 0.2
NFXL1-206ENST00000507489 CFDP1Q9UEE9 299 aaPredicted RBP16.28■□□□□ 0.2
NFXL1-206ENST00000507489 TMC1Q8TDI8 760 aa16.26■□□□□ 0.19
NFXL1-206ENST00000507489 DHX57Q6P158 1386 aaKnown RBP16.25■□□□□ 0.19
NFXL1-206ENST00000507489 SETD5Q9C0A6 1442 aa16.23■□□□□ 0.19
NFXL1-206ENST00000507489 CADPSQ9ULU8 1353 aa16.22■□□□□ 0.19
NFXL1-206ENST00000507489 DNAJC5BQ9UF47 199 aa16.21■□□□□ 0.18
NFXL1-206ENST00000507489 PLEKHD1A6NEE1 506 aa16.2■□□□□ 0.18
NFXL1-206ENST00000507489 SYNJ1O43426 1573 aa16.2■□□□□ 0.18
NFXL1-206ENST00000507489 FHAD1B1AJZ9 1412 aa16.19■□□□□ 0.18
NFXL1-206ENST00000507489 HSPA5P11021 654 aaKnown RBP16.16■□□□□ 0.18
NFXL1-206ENST00000507489 IGF1RP08069 1367 aa16.15■□□□□ 0.18
NFXL1-206ENST00000507489 RAD54L2Q9Y4B4 1467 aa16.14■□□□□ 0.17
NFXL1-206ENST00000507489 PPP1R15AO75807 674 aaPredicted RBP16.14■□□□□ 0.17
NFXL1-206ENST00000507489 CCDC136Q96JN2 1154 aa16.13■□□□□ 0.17
NFXL1-206ENST00000507489 ARHGAP35Q9NRY4 1499 aa16.12■□□□□ 0.17
NFXL1-206ENST00000507489 RTL5Q5HYW3 569 aaPredicted RBP16.12■□□□□ 0.17
NFXL1-206ENST00000507489 CARD11Q9BXL7 1154 aa16.11■□□□□ 0.17
NFXL1-206ENST00000507489 KIF21BO75037 1637 aa16.11■□□□□ 0.17
NFXL1-206ENST00000507489 ARAP1Q96P48 1450 aa16.1■□□□□ 0.17
NFXL1-206ENST00000507489 B4GALNT3Q6L9W6 998 aa16.09■□□□□ 0.17
NFXL1-206ENST00000507489 NBR1Q14596 966 aa16.08■□□□□ 0.17
NFXL1-206ENST00000507489 CANXP27824 592 aaKnown RBP16.07■□□□□ 0.16
NFXL1-206ENST00000507489 L3MBTL2Q969R5 705 aa16.07■□□□□ 0.16
NFXL1-206ENST00000507489 MPHOSPH9Q99550 1183 aa16.07■□□□□ 0.16
NFXL1-206ENST00000507489 DCAF11Q8TEB1 546 aa16.07■□□□□ 0.16
NFXL1-206ENST00000507489 PHLDB1Q86UU1 1377 aa16.06■□□□□ 0.16
NFXL1-206ENST00000507489 FGD5Q6ZNL6 1462 aa16.05■□□□□ 0.16
NFXL1-206ENST00000507489 PKD2Q13563 968 aa16.05■□□□□ 0.16
NFXL1-206ENST00000507489 FANCD2Q9BXW9 1451 aa16.04■□□□□ 0.16
NFXL1-206ENST00000507489 RTN4Q9NQC3 1192 aaKnown RBP16.04■□□□□ 0.16
NFXL1-206ENST00000507489 ERCC6Q03468 1493 aa16.04■□□□□ 0.16
NFXL1-206ENST00000507489 EIF5BO60841 1220 aaKnown RBP16.04■□□□□ 0.16
NFXL1-206ENST00000507489 CC2D1BQ5T0F9 858 aaKnown RBP16.01■□□□□ 0.15
NFXL1-206ENST00000507489 ZNF644Q9H582 1327 aaPredicted RBP16.01■□□□□ 0.15
NFXL1-206ENST00000507489 NESP48681 1621 aa15.99■□□□□ 0.15
NFXL1-206ENST00000507489 ANP32AP39687 249 aaKnown RBP15.98■□□□□ 0.15
NFXL1-206ENST00000507489 FMN1Q68DA7 1419 aa15.97■□□□□ 0.15
NFXL1-206ENST00000507489 HNRNPMP52272 730 aaKnown RBP eCLIP15.96■□□□□ 0.15
NFXL1-206ENST00000507489 TNNT2P45379 298 aaPredicted RBP15.96■□□□□ 0.15
NFXL1-206ENST00000507489 PLEKHG5O94827 1062 aa15.95■□□□□ 0.14
NFXL1-206ENST00000507489 PDS5BQ9NTI5 1447 aa15.94■□□□□ 0.14
NFXL1-206ENST00000507489 NEUROD2Q15784 382 aa15.94■□□□□ 0.14
NFXL1-206ENST00000507489 NPM1P06748 294 aaKnown RBP eCLIP15.94■□□□□ 0.14
NFXL1-206ENST00000507489 BICRAQ9NZM4 1560 aa15.93■□□□□ 0.14
NFXL1-206ENST00000507489 WDR43Q15061 677 aaKnown RBP eCLIP15.93■□□□□ 0.14
NFXL1-206ENST00000507489 TSHZ2Q9NRE2 1034 aa15.93■□□□□ 0.14
NFXL1-206ENST00000507489 NCAPD3P42695 1498 aa15.92■□□□□ 0.14
NFXL1-206ENST00000507489 CUX1P39880 1505 aa15.92■□□□□ 0.14
NFXL1-206ENST00000507489 STAG3Q9UJ98 1225 aa15.91■□□□□ 0.14
NFXL1-206ENST00000507489 TIMELESSQ9UNS1 1208 aa15.9■□□□□ 0.14
NFXL1-206ENST00000507489 NUP155O75694 1391 aa15.89■□□□□ 0.13
NFXL1-206ENST00000507489 PRXQ9BXM0 1461 aa15.88■□□□□ 0.13
NFXL1-206ENST00000507489 RBM19Q9Y4C8 960 aaKnown RBP15.88■□□□□ 0.13
NFXL1-206ENST00000507489 AQRO60306 1485 aaKnown RBP eCLIP15.88■□□□□ 0.132e-6■■■■■ 26.9
NFXL1-206ENST00000507489 CCER2I3L3R5 266 aa15.88■□□□□ 0.13
NFXL1-206ENST00000507489 JPH4Q96JJ6 628 aa15.87■□□□□ 0.13
NFXL1-206ENST00000507489 CFTRP13569 1480 aa15.84■□□□□ 0.13
NFXL1-206ENST00000507489 LRRC9Q6ZRR7 1453 aa15.84■□□□□ 0.13
NFXL1-206ENST00000507489 SAFB2Q14151 953 aaKnown RBP eCLIP15.84■□□□□ 0.13
NFXL1-206ENST00000507489 CCDC18Q5T9S5 1454 aa15.84■□□□□ 0.13
NFXL1-206ENST00000507489 PPP4R2Q9NY27 417 aa15.82■□□□□ 0.12
NFXL1-206ENST00000507489 KNSTRNQ9Y448 316 aa15.82■□□□□ 0.12
NFXL1-206ENST00000507489 ARXQ96QS3 562 aa15.81■□□□□ 0.12
NFXL1-206ENST00000507489 ZBTB47Q9UFB7 747 aaPredicted RBP15.81■□□□□ 0.12
NFXL1-206ENST00000507489 GAPVD1Q14C86 1478 aa15.81■□□□□ 0.12
NFXL1-206ENST00000507489 ANP32EQ9BTT0 268 aa15.81■□□□□ 0.12
NFXL1-206ENST00000507489 ST20-MTHFSA0A0A6YYL1 179 aa15.8■□□□□ 0.12
NFXL1-206ENST00000507489 FGD6Q6ZV73 1430 aa15.8■□□□□ 0.12
NFXL1-206ENST00000507489 TOP2BQ02880 1626 aa15.79■□□□□ 0.12
NFXL1-206ENST00000507489 PPM1GO15355 546 aaPredicted RBP15.78■□□□□ 0.12
NFXL1-206ENST00000507489 NUTM2DQ5VT03 806 aaPredicted RBP15.76■□□□□ 0.11
NFXL1-206ENST00000507489 GGT6Q6P531 493 aa15.76■□□□□ 0.11
NFXL1-206ENST00000507489 RGS3P49796 1198 aa15.76■□□□□ 0.11
NFXL1-206ENST00000507489 CCDC184Q52MB2 194 aa15.76■□□□□ 0.11
NFXL1-206ENST00000507489 RRBP1Q9P2E9 1410 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms