RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-222ENST00000507459 SHROOM2Q13796 1616 aa23.94■■□□□ 1.42
CCHCR1-222ENST00000507459 PRG4Q92954 1404 aaPredicted RBP23.92■■□□□ 1.42
CCHCR1-222ENST00000507459 KIAA0586Q9BVV6 1533 aa23.89■■□□□ 1.41
CCHCR1-222ENST00000507459 RAPGEF2Q9Y4G8 1499 aa23.84■■□□□ 1.41
CCHCR1-222ENST00000507459 TRHP20396 242 aaPredicted RBP23.8■■□□□ 1.4
CCHCR1-222ENST00000507459 CHIC1Q5VXU3 224 aa23.73■■□□□ 1.39
CCHCR1-222ENST00000507459 IQGAP2Q13576 1575 aa23.73■■□□□ 1.39
CCHCR1-222ENST00000507459 TTBK1Q5TCY1 1321 aaPredicted RBP23.71■■□□□ 1.39
CCHCR1-222ENST00000507459 CSRNP3Q8WYN3 585 aa23.71■■□□□ 1.39
CCHCR1-222ENST00000507459 FAM9AQ8IZU1 332 aaPredicted RBP23.7■■□□□ 1.38
CCHCR1-222ENST00000507459 PRXQ9BXM0 1461 aa23.69■■□□□ 1.38
CCHCR1-222ENST00000507459 CARMIL2Q6F5E8 1435 aa23.67■■□□□ 1.38
CCHCR1-222ENST00000507459 EEA1Q15075 1411 aa23.62■■□□□ 1.37
CCHCR1-222ENST00000507459 PTPRGP23470 1445 aa23.61■■□□□ 1.37
CCHCR1-222ENST00000507459 TNIKQ9UKE5 1360 aa23.6■■□□□ 1.37
CCHCR1-222ENST00000507459 CTTNBP2Q8WZ74 1663 aa23.58■■□□□ 1.37
CCHCR1-222ENST00000507459 NPM1P06748 294 aaKnown RBP eCLIP23.58■■□□□ 1.37
CCHCR1-222ENST00000507459 DISP1Q96F81 1524 aa23.58■■□□□ 1.36
CCHCR1-222ENST00000507459 UGGT2Q9NYU1 1516 aa23.58■■□□□ 1.36
CCHCR1-222ENST00000507459 ADCY10Q96PN6 1610 aa23.53■■□□□ 1.36
CCHCR1-222ENST00000507459 KIAA0556O60303 1618 aa23.5■■□□□ 1.35
CCHCR1-222ENST00000507459 EHMT2Q96KQ7 1210 aa23.46■■□□□ 1.35
CCHCR1-222ENST00000507459 GOLGA3Q08378 1498 aa23.45■■□□□ 1.34
CCHCR1-222ENST00000507459 UACAQ9BZF9 1416 aa23.43■■□□□ 1.34
CCHCR1-222ENST00000507459 RANGAP1P46060 587 aaPredicted RBP23.43■■□□□ 1.34
CCHCR1-222ENST00000507459 P3H3Q8IVL6 736 aa23.42■■□□□ 1.34
CCHCR1-222ENST00000507459 MAPKBP1O60336 1514 aa23.38■■□□□ 1.33
CCHCR1-222ENST00000507459 ABCC2Q92887 1545 aa23.38■■□□□ 1.33
CCHCR1-222ENST00000507459 KIF21BO75037 1637 aa23.38■■□□□ 1.33
CCHCR1-222ENST00000507459 FAM69CQ0P6D2 419 aa23.38■■□□□ 1.33
CCHCR1-222ENST00000507459 UHRF1BP1LA0JNW5 1464 aa23.37■■□□□ 1.33
CCHCR1-222ENST00000507459 UBTFP17480 764 aaKnown RBP23.34■■□□□ 1.33
CCHCR1-222ENST00000507459 ABCC10Q5T3U5 1492 aa23.34■■□□□ 1.33
CCHCR1-222ENST00000507459 KIF13AQ9H1H9 1805 aa23.33■■□□□ 1.33
CCHCR1-222ENST00000507459 PLB1Q6P1J6 1458 aa23.33■■□□□ 1.33
CCHCR1-222ENST00000507459 ASXL2Q76L83 1435 aa23.28■■□□□ 1.32
CCHCR1-222ENST00000507459 KDM5BQ9UGL1 1544 aa23.28■■□□□ 1.32
CCHCR1-222ENST00000507459 DIP2BQ9P265 1576 aa23.27■■□□□ 1.32
CCHCR1-222ENST00000507459 SAMD9Q5K651 1589 aa23.27■■□□□ 1.32
CCHCR1-222ENST00000507459 ABCA8O94911 1581 aa23.24■■□□□ 1.31
CCHCR1-222ENST00000507459 ZCCHC11Q5TAX3 1644 aaKnown RBP23.24■■□□□ 1.31
CCHCR1-222ENST00000507459 ARID3CA6NKF2 412 aa23.22■■□□□ 1.31
CCHCR1-222ENST00000507459 FHOD3Q2V2M9 1422 aa23.21■■□□□ 1.31
CCHCR1-222ENST00000507459 TSPOAP1O95153 1857 aa23.15■■□□□ 1.3
CCHCR1-222ENST00000507459 EFCAB5A4FU69 1503 aa23.13■■□□□ 1.29
CCHCR1-222ENST00000507459 EPRSP07814 1512 aaKnown RBP23.13■■□□□ 1.29
CCHCR1-222ENST00000507459 KCNH8Q96L42 1107 aa23.12■■□□□ 1.29
CCHCR1-222ENST00000507459 WDR7Q9Y4E6 1490 aa23.11■■□□□ 1.29
CCHCR1-222ENST00000507459 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.11■■□□□ 1.29
CCHCR1-222ENST00000507459 HNRNPUL2Q1KMD3 747 aaKnown RBP23.11■■□□□ 1.29
CCHCR1-222ENST00000507459 RAPGEF6Q8TEU7 1601 aa23.11■■□□□ 1.29
CCHCR1-222ENST00000507459 GLI2P10070 1586 aa23.1■■□□□ 1.29
CCHCR1-222ENST00000507459 ATP10BO94823 1461 aa23.1■■□□□ 1.29
CCHCR1-222ENST00000507459 ARHGAP35Q9NRY4 1499 aa23.05■■□□□ 1.28
CCHCR1-222ENST00000507459 NUP153P49790 1475 aaKnown RBP23.03■■□□□ 1.28
CCHCR1-222ENST00000507459 ATP1B4Q9UN42 357 aaPredicted RBP23.01■■□□□ 1.27
CCHCR1-222ENST00000507459 MAP3K4Q9Y6R4 1608 aa22.99■■□□□ 1.27
CCHCR1-222ENST00000507459 PPRC1Q5VV67 1664 aaKnown RBP22.98■■□□□ 1.27
CCHCR1-222ENST00000507459 KDM6BO15054 1643 aa22.97■■□□□ 1.27
CCHCR1-222ENST00000507459 FMN1Q68DA7 1419 aa22.96■■□□□ 1.27
CCHCR1-222ENST00000507459 CD109Q6YHK3 1445 aa22.96■■□□□ 1.27
CCHCR1-222ENST00000507459 PLEKHD1A6NEE1 506 aa22.93■■□□□ 1.26
CCHCR1-222ENST00000507459 TEX14Q8IWB6 1497 aa22.92■■□□□ 1.26
CCHCR1-222ENST00000507459 CFAP43Q8NDM7 1665 aa22.9■■□□□ 1.26
CCHCR1-222ENST00000507459 CDK13Q14004 1512 aaKnown RBP22.88■■□□□ 1.25
CCHCR1-222ENST00000507459 CLIP1P30622 1438 aa22.88■■□□□ 1.25
CCHCR1-222ENST00000507459 MAGI3Q5TCQ9 1506 aa22.86■■□□□ 1.25
CCHCR1-222ENST00000507459 HECW1Q76N89 1606 aa22.86■■□□□ 1.25
CCHCR1-222ENST00000507459 COL17A1Q9UMD9 1497 aaPredicted RBP22.84■■□□□ 1.25
CCHCR1-222ENST00000507459 ABCA9Q8IUA7 1624 aa22.82■■□□□ 1.24
CCHCR1-222ENST00000507459 LOC105371045A0A1W2PR82 267 aa22.82■■□□□ 1.24
CCHCR1-222ENST00000507459 CDK11AQ9UQ88 783 aaPredicted RBP22.79■■□□□ 1.24
CCHCR1-222ENST00000507459 CASKIN1Q8WXD9 1431 aa22.76■■□□□ 1.23
CCHCR1-222ENST00000507459 PCF11O94913 1555 aaKnown RBP22.76■■□□□ 1.23
CCHCR1-222ENST00000507459 CEP162Q5TB80 1403 aa22.74■■□□□ 1.23
CCHCR1-222ENST00000507459 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.73■■□□□ 1.231e-5■■■■□ 25.8
CCHCR1-222ENST00000507459 LRRIQ1Q96JM4 1722 aa22.72■■□□□ 1.23
CCHCR1-222ENST00000507459 AEBP2Q6ZN18 517 aaPredicted RBP22.72■■□□□ 1.23
CCHCR1-222ENST00000507459 TTC37Q6PGP7 1564 aa22.69■■□□□ 1.22
CCHCR1-222ENST00000507459 FYCO1Q9BQS8 1478 aa22.68■■□□□ 1.22
CCHCR1-222ENST00000507459 PHLDB1Q86UU1 1377 aa22.68■■□□□ 1.22
CCHCR1-222ENST00000507459 CCDC18Q5T9S5 1454 aa22.67■■□□□ 1.22
CCHCR1-222ENST00000507459 NEO1Q92859 1461 aa22.67■■□□□ 1.22
CCHCR1-222ENST00000507459 TROQ12816 1431 aaPredicted RBP22.67■■□□□ 1.22
CCHCR1-222ENST00000507459 ARAP3Q8WWN8 1544 aa22.67■■□□□ 1.22
CCHCR1-222ENST00000507459 RAPGEF3O95398 923 aa22.65■■□□□ 1.22
CCHCR1-222ENST00000507459 FANCAO15360 1455 aa22.63■■□□□ 1.21
CCHCR1-222ENST00000507459 KIF14Q15058 1648 aa22.63■■□□□ 1.21
CCHCR1-222ENST00000507459 AKNAQ7Z591 1439 aa22.61■■□□□ 1.21
CCHCR1-222ENST00000507459 PLCH2O75038 1416 aa22.6■■□□□ 1.21
CCHCR1-222ENST00000507459 KDM4FA0A1W2PPD8 638 aa22.57■■□□□ 1.2
CCHCR1-222ENST00000507459 CFAP74Q9C0B2 1584 aa22.56■■□□□ 1.2
CCHCR1-222ENST00000507459 EFCAB2Q5VUJ9 269 aa22.56■■□□□ 1.2
CCHCR1-222ENST00000507459 DENND4BO75064 1496 aaPredicted RBP22.55■■□□□ 1.2
CCHCR1-222ENST00000507459 MYO5CQ9NQX4 1742 aa22.55■■□□□ 1.2
CCHCR1-222ENST00000507459 ARHGAP5Q13017 1502 aa22.52■■□□□ 1.19
CCHCR1-222ENST00000507459 ADGRL1O94910 1474 aa22.51■■□□□ 1.19
CCHCR1-222ENST00000507459 FRMPD1Q5SYB0 1578 aa22.5■■□□□ 1.19
CCHCR1-222ENST00000507459 SCAPERQ9BY12 1400 aa22.5■■□□□ 1.19
CCHCR1-222ENST00000507459 MTUS2Q5JR59 1369 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms