RNA–Protein interactions for RNA: ENST00000507365.1

LINC02172-201, Transcript of long intergenic non-protein coding RNA 2172, humanhuman

TSL 4 BASIC

Gene LINC02172, Length 2,264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02172-201ENST00000507365 CLIP1P30622 1438 aa17.47■□□□□ 0.39
LINC02172-201ENST00000507365 SNAPC4Q5SXM2 1469 aa17.43■□□□□ 0.38
LINC02172-201ENST00000507365 ADAMTS12P58397 1594 aa17.42■□□□□ 0.38
LINC02172-201ENST00000507365 FHAD1B1AJZ9 1412 aa17.42■□□□□ 0.38
LINC02172-201ENST00000507365 FBLN2P98095 1184 aa17.37■□□□□ 0.37
LINC02172-201ENST00000507365 MAGI1Q96QZ7 1491 aaPredicted RBP17.34■□□□□ 0.37
LINC02172-201ENST00000507365 CTTNBP2Q8WZ74 1663 aa17.34■□□□□ 0.37
LINC02172-201ENST00000507365 CHMP7Q8WUX9 453 aaPredicted RBP17.33■□□□□ 0.36
LINC02172-201ENST00000507365 PPARGC1BQ86YN6 1023 aaKnown RBP17.32■□□□□ 0.36
LINC02172-201ENST00000507365 ARHGAP35Q9NRY4 1499 aa17.29■□□□□ 0.36
LINC02172-201ENST00000507365 GRIN2AQ12879 1464 aa17.29■□□□□ 0.36
LINC02172-201ENST00000507365 P3H3Q8IVL6 736 aa17.29■□□□□ 0.36
LINC02172-201ENST00000507365 SYNJ2O15056 1496 aa17.29■□□□□ 0.36
LINC02172-201ENST00000507365 ARAP1Q96P48 1450 aa17.28■□□□□ 0.36
LINC02172-201ENST00000507365 VPS8Q8N3P4 1428 aa17.27■□□□□ 0.36
LINC02172-201ENST00000507365 IQGAP2Q13576 1575 aa17.21■□□□□ 0.35
LINC02172-201ENST00000507365 FHOD3Q2V2M9 1422 aa17.2■□□□□ 0.34
LINC02172-201ENST00000507365 EFCAB5A4FU69 1503 aa17.19■□□□□ 0.34
LINC02172-201ENST00000507365 CEP170Q5SW79 1584 aa17.19■□□□□ 0.34
LINC02172-201ENST00000507365 KIAA0586Q9BVV6 1533 aa17.17■□□□□ 0.34
LINC02172-201ENST00000507365 PCGF6Q9BYE7 350 aa17.16■□□□□ 0.34
LINC02172-201ENST00000507365 CHD1O14646 1710 aa17.15■□□□□ 0.34
LINC02172-201ENST00000507365 NUP160Q12769 1436 aa17.13■□□□□ 0.33
LINC02172-201ENST00000507365 SAMD9Q5K651 1589 aa17.13■□□□□ 0.33
LINC02172-201ENST00000507365 ATP1B4Q9UN42 357 aaPredicted RBP17.13■□□□□ 0.33
LINC02172-201ENST00000507365 TRIM26Q12899 539 aaPredicted RBP17.09■□□□□ 0.33
LINC02172-201ENST00000507365 UGGT2Q9NYU1 1516 aa17.08■□□□□ 0.33
LINC02172-201ENST00000507365 PCF11O94913 1555 aaKnown RBP17.07■□□□□ 0.32
LINC02172-201ENST00000507365 JPH4Q96JJ6 628 aa17.07■□□□□ 0.32
LINC02172-201ENST00000507365 FMN1Q68DA7 1419 aa17.06■□□□□ 0.32
LINC02172-201ENST00000507365 DISP1Q96F81 1524 aa17.04■□□□□ 0.32
LINC02172-201ENST00000507365 KIAA0556O60303 1618 aa17.04■□□□□ 0.32
LINC02172-201ENST00000507365 KANK4Q5T7N3 995 aaPredicted RBP17.01■□□□□ 0.31
LINC02172-201ENST00000507365 FYCO1Q9BQS8 1478 aa17■□□□□ 0.31
LINC02172-201ENST00000507365 CASKIN1Q8WXD9 1431 aa17■□□□□ 0.31
LINC02172-201ENST00000507365 CARMIL2Q6F5E8 1435 aa16.99■□□□□ 0.31
LINC02172-201ENST00000507365 ARID3CA6NKF2 412 aa16.96■□□□□ 0.31
LINC02172-201ENST00000507365 PRG4Q92954 1404 aaPredicted RBP16.96■□□□□ 0.31
LINC02172-201ENST00000507365 TIAM1Q13009 1591 aa16.96■□□□□ 0.31
LINC02172-201ENST00000507365 CFAP43Q8NDM7 1665 aa16.91■□□□□ 0.3
LINC02172-201ENST00000507365 CLASP1Q7Z460 1538 aa16.91■□□□□ 0.3
LINC02172-201ENST00000507365 MAP3K1Q13233 1512 aa16.9■□□□□ 0.3
LINC02172-201ENST00000507365 LRRC9Q6ZRR7 1453 aa16.89■□□□□ 0.29
LINC02172-201ENST00000507365 LRRIQ1Q96JM4 1722 aa16.89■□□□□ 0.29
LINC02172-201ENST00000507365 HECW1Q76N89 1606 aa16.89■□□□□ 0.29
LINC02172-201ENST00000507365 SHROOM2Q13796 1616 aa16.89■□□□□ 0.29
LINC02172-201ENST00000507365 PLB1Q6P1J6 1458 aa16.88■□□□□ 0.29
LINC02172-201ENST00000507365 ERCC6L2Q5T890 1561 aa16.87■□□□□ 0.29
LINC02172-201ENST00000507365 RAPGEF6Q8TEU7 1601 aa16.86■□□□□ 0.29
LINC02172-201ENST00000507365 MTUS2Q5JR59 1369 aa16.85■□□□□ 0.29
LINC02172-201ENST00000507365 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.85■□□□□ 0.29
LINC02172-201ENST00000507365 HNRNPUL2Q1KMD3 747 aaKnown RBP16.85■□□□□ 0.29
LINC02172-201ENST00000507365 OSCARQ8IYS5 282 aa16.85■□□□□ 0.29
LINC02172-201ENST00000507365 CDK13Q14004 1512 aaKnown RBP16.85■□□□□ 0.29
LINC02172-201ENST00000507365 EPRSP07814 1512 aaKnown RBP16.84■□□□□ 0.29
LINC02172-201ENST00000507365 PTPRGP23470 1445 aa16.84■□□□□ 0.29
LINC02172-201ENST00000507365 CCDC18Q5T9S5 1454 aa16.84■□□□□ 0.29
LINC02172-201ENST00000507365 NCBP3Q53F19 620 aaKnown RBP16.84■□□□□ 0.29
LINC02172-201ENST00000507365 NUP153P49790 1475 aaKnown RBP16.83■□□□□ 0.28
LINC02172-201ENST00000507365 MAGI3Q5TCQ9 1506 aa16.77■□□□□ 0.28
LINC02172-201ENST00000507365 PHLDB1Q86UU1 1377 aa16.76■□□□□ 0.27
LINC02172-201ENST00000507365 ABCA8O94911 1581 aa16.76■□□□□ 0.27
LINC02172-201ENST00000507365 EHBP1L1Q8N3D4 1523 aa16.76■□□□□ 0.27
LINC02172-201ENST00000507365 UACAQ9BZF9 1416 aa16.73■□□□□ 0.27
LINC02172-201ENST00000507365 CDK11AQ9UQ88 783 aaPredicted RBP16.72■□□□□ 0.27
LINC02172-201ENST00000507365 SUPT6HQ7KZ85 1726 aaKnown RBP16.71■□□□□ 0.27
LINC02172-201ENST00000507365 NCOA2Q15596 1464 aa16.71■□□□□ 0.27
LINC02172-201ENST00000507365 CCNB3Q8WWL7 1395 aa16.71■□□□□ 0.27
LINC02172-201ENST00000507365 RRBP1Q9P2E9 1410 aaKnown RBP16.71■□□□□ 0.27
LINC02172-201ENST00000507365 ITGAEP38570 1179 aa16.7■□□□□ 0.26
LINC02172-201ENST00000507365 ATP10BO94823 1461 aa16.69■□□□□ 0.26
LINC02172-201ENST00000507365 FAM50AQ14320 339 aaKnown RBP16.68■□□□□ 0.26
LINC02172-201ENST00000507365 ABCC2Q92887 1545 aa16.66■□□□□ 0.26
LINC02172-201ENST00000507365 PLEKHD1A6NEE1 506 aa16.65■□□□□ 0.26
LINC02172-201ENST00000507365 TROQ12816 1431 aaPredicted RBP16.65■□□□□ 0.26
LINC02172-201ENST00000507365 FGD6Q6ZV73 1430 aa16.63■□□□□ 0.25
LINC02172-201ENST00000507365 MYOM3Q5VTT5 1437 aa16.63■□□□□ 0.25
LINC02172-201ENST00000507365 ARHGEF11O15085 1522 aa16.62■□□□□ 0.25
LINC02172-201ENST00000507365 KIF14Q15058 1648 aa16.6■□□□□ 0.25
LINC02172-201ENST00000507365 UHRF1BP1LA0JNW5 1464 aa16.58■□□□□ 0.24
LINC02172-201ENST00000507365 ADCY10Q96PN6 1610 aa16.57■□□□□ 0.24
LINC02172-201ENST00000507365 EIF5BO60841 1220 aaKnown RBP16.57■□□□□ 0.24
LINC02172-201ENST00000507365 ZCCHC11Q5TAX3 1644 aaKnown RBP16.56■□□□□ 0.24
LINC02172-201ENST00000507365 PTPN23Q9H3S7 1636 aa16.55■□□□□ 0.24
LINC02172-201ENST00000507365 KDM5BQ9UGL1 1544 aa16.54■□□□□ 0.24
LINC02172-201ENST00000507365 KCNH8Q96L42 1107 aa16.54■□□□□ 0.24
LINC02172-201ENST00000507365 CFDP1Q9UEE9 299 aaPredicted RBP16.51■□□□□ 0.23
LINC02172-201ENST00000507365 ZNF777Q9ULD5 760 aaPredicted RBP16.51■□□□□ 0.23
LINC02172-201ENST00000507365 MIA2Q96PC5 1412 aa16.51■□□□□ 0.23
LINC02172-201ENST00000507365 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.51■□□□□ 0.23
LINC02172-201ENST00000507365 CCER1Q8TC90 406 aaPredicted RBP16.5■□□□□ 0.23
LINC02172-201ENST00000507365 HRCP23327 699 aa16.5■□□□□ 0.23
LINC02172-201ENST00000507365 GPATCH8Q9UKJ3 1502 aaKnown RBP16.5■□□□□ 0.23
LINC02172-201ENST00000507365 ZNF644Q9H582 1327 aaPredicted RBP16.5■□□□□ 0.23
LINC02172-201ENST00000507365 CYB5RLQ6IPT4 315 aa16.49■□□□□ 0.23
LINC02172-201ENST00000507365 PLPPR3Q6T4P5 718 aa16.49■□□□□ 0.23
LINC02172-201ENST00000507365 ABCC10Q5T3U5 1492 aa16.49■□□□□ 0.23
LINC02172-201ENST00000507365 ITSN2Q9NZM3 1697 aa16.48■□□□□ 0.23
LINC02172-201ENST00000507365 RTN4Q9NQC3 1192 aaKnown RBP16.48■□□□□ 0.23
LINC02172-201ENST00000507365 NPM1P06748 294 aaKnown RBP eCLIP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms