RNA–Protein interactions for RNA: ENST00000507226.1

CCHCR1-221, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-221ENST00000507226 RIMBP3CA6NJZ7 1639 aa29.63■■■□□ 2.33
CCHCR1-221ENST00000507226 RIMBP3BA6NNM3 1639 aa29.63■■■□□ 2.33
CCHCR1-221ENST00000507226 RIMBP3Q9UFD9 1639 aa29.63■■■□□ 2.33
CCHCR1-221ENST00000507226 JPH4Q96JJ6 628 aa29.61■■■□□ 2.33
CCHCR1-221ENST00000507226 SHROOM2Q13796 1616 aa29.56■■■□□ 2.32
CCHCR1-221ENST00000507226 PRG4Q92954 1404 aaPredicted RBP29.53■■■□□ 2.32
CCHCR1-221ENST00000507226 ARAP1Q96P48 1450 aa29.5■■■□□ 2.31
CCHCR1-221ENST00000507226 ERCC6L2Q5T890 1561 aa29.5■■■□□ 2.31
CCHCR1-221ENST00000507226 CYB5RLQ6IPT4 315 aa29.46■■■□□ 2.31
CCHCR1-221ENST00000507226 IQGAP2Q13576 1575 aa29.46■■■□□ 2.31
CCHCR1-221ENST00000507226 KIF21BO75037 1637 aa29.43■■■□□ 2.3
CCHCR1-221ENST00000507226 UGGT2Q9NYU1 1516 aa29.35■■■□□ 2.29
CCHCR1-221ENST00000507226 EHMT2Q96KQ7 1210 aa29.34■■■□□ 2.29
CCHCR1-221ENST00000507226 GOLGA3Q08378 1498 aa29.32■■■□□ 2.28
CCHCR1-221ENST00000507226 CARMIL2Q6F5E8 1435 aa29.32■■■□□ 2.28
CCHCR1-221ENST00000507226 CTTNBP2Q8WZ74 1663 aa29.31■■■□□ 2.28
CCHCR1-221ENST00000507226 DISP1Q96F81 1524 aa29.3■■■□□ 2.28
CCHCR1-221ENST00000507226 UBTFP17480 764 aaKnown RBP29.25■■■□□ 2.27
CCHCR1-221ENST00000507226 TNIKQ9UKE5 1360 aa29.24■■■□□ 2.27
CCHCR1-221ENST00000507226 PTPRGP23470 1445 aa29.2■■■□□ 2.26
CCHCR1-221ENST00000507226 KIAA0556O60303 1618 aa29.19■■■□□ 2.26
CCHCR1-221ENST00000507226 TTBK1Q5TCY1 1321 aaPredicted RBP29.16■■■□□ 2.26
CCHCR1-221ENST00000507226 RANGAP1P46060 587 aaPredicted RBP29.14■■■□□ 2.26
CCHCR1-221ENST00000507226 P3H3Q8IVL6 736 aa29.09■■■□□ 2.25
CCHCR1-221ENST00000507226 SAMD9Q5K651 1589 aa29.05■■■□□ 2.24
CCHCR1-221ENST00000507226 UACAQ9BZF9 1416 aa29■■■□□ 2.23
CCHCR1-221ENST00000507226 EFCAB5A4FU69 1503 aa28.98■■■□□ 2.23
CCHCR1-221ENST00000507226 ADCY10Q96PN6 1610 aa28.98■■■□□ 2.23
CCHCR1-221ENST00000507226 FHOD3Q2V2M9 1422 aa28.96■■■□□ 2.23
CCHCR1-221ENST00000507226 UHRF1BP1LA0JNW5 1464 aa28.95■■■□□ 2.22
CCHCR1-221ENST00000507226 LOC105371045A0A1W2PR82 267 aa28.94■■■□□ 2.22
CCHCR1-221ENST00000507226 PLB1Q6P1J6 1458 aa28.93■■■□□ 2.22
CCHCR1-221ENST00000507226 ARHGAP35Q9NRY4 1499 aa28.92■■■□□ 2.22
CCHCR1-221ENST00000507226 ABCC2Q92887 1545 aa28.91■■■□□ 2.22
CCHCR1-221ENST00000507226 NPM1P06748 294 aaKnown RBP eCLIP28.91■■■□□ 2.22
CCHCR1-221ENST00000507226 ABCA8O94911 1581 aa28.88■■■□□ 2.21
CCHCR1-221ENST00000507226 CLIP1P30622 1438 aa28.82■■■□□ 2.2
CCHCR1-221ENST00000507226 KDM5BQ9UGL1 1544 aa28.8■■■□□ 2.2
CCHCR1-221ENST00000507226 TRHP20396 242 aaPredicted RBP28.78■■■□□ 2.2
CCHCR1-221ENST00000507226 MAPKBP1O60336 1514 aa28.77■■■□□ 2.2
CCHCR1-221ENST00000507226 CEP162Q5TB80 1403 aa28.75■■■□□ 2.19
CCHCR1-221ENST00000507226 FMN1Q68DA7 1419 aa28.74■■■□□ 2.19
CCHCR1-221ENST00000507226 RAPGEF6Q8TEU7 1601 aa28.72■■■□□ 2.19
CCHCR1-221ENST00000507226 ARID3CA6NKF2 412 aa28.71■■■□□ 2.19
CCHCR1-221ENST00000507226 NUP153P49790 1475 aaKnown RBP28.7■■■□□ 2.18
CCHCR1-221ENST00000507226 ASXL2Q76L83 1435 aa28.69■■■□□ 2.18
CCHCR1-221ENST00000507226 ATP10BO94823 1461 aa28.68■■■□□ 2.18
CCHCR1-221ENST00000507226 ZCCHC11Q5TAX3 1644 aaKnown RBP28.68■■■□□ 2.18
CCHCR1-221ENST00000507226 ABCC10Q5T3U5 1492 aa28.65■■■□□ 2.18
CCHCR1-221ENST00000507226 FAM69CQ0P6D2 419 aa28.6■■■□□ 2.17
CCHCR1-221ENST00000507226 ATP1B4Q9UN42 357 aaPredicted RBP28.58■■■□□ 2.17
CCHCR1-221ENST00000507226 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.57■■■□□ 2.16
CCHCR1-221ENST00000507226 HNRNPUL2Q1KMD3 747 aaKnown RBP28.57■■■□□ 2.16
CCHCR1-221ENST00000507226 WDR7Q9Y4E6 1490 aa28.57■■■□□ 2.16
CCHCR1-221ENST00000507226 CASKIN1Q8WXD9 1431 aa28.56■■■□□ 2.16
CCHCR1-221ENST00000507226 DIP2BQ9P265 1576 aa28.55■■■□□ 2.16
CCHCR1-221ENST00000507226 HECW1Q76N89 1606 aa28.53■■■□□ 2.16
CCHCR1-221ENST00000507226 EPRSP07814 1512 aaKnown RBP28.53■■■□□ 2.16
CCHCR1-221ENST00000507226 PCF11O94913 1555 aaKnown RBP28.5■■■□□ 2.15
CCHCR1-221ENST00000507226 CDK13Q14004 1512 aaKnown RBP28.49■■■□□ 2.15
CCHCR1-221ENST00000507226 KCNH8Q96L42 1107 aa28.48■■■□□ 2.15
CCHCR1-221ENST00000507226 FYCO1Q9BQS8 1478 aa28.47■■■□□ 2.15
CCHCR1-221ENST00000507226 GLI2P10070 1586 aa28.45■■■□□ 2.15
CCHCR1-221ENST00000507226 PLEKHD1A6NEE1 506 aa28.45■■■□□ 2.14
CCHCR1-221ENST00000507226 KIF13AQ9H1H9 1805 aa28.43■■■□□ 2.14
CCHCR1-221ENST00000507226 CCDC18Q5T9S5 1454 aa28.39■■■□□ 2.13
CCHCR1-221ENST00000507226 VPS8Q8N3P4 1428 aa28.38■■■□□ 2.13
CCHCR1-221ENST00000507226 CDK11AQ9UQ88 783 aaPredicted RBP28.37■■■□□ 2.13
CCHCR1-221ENST00000507226 LRRIQ1Q96JM4 1722 aa28.31■■■□□ 2.12
CCHCR1-221ENST00000507226 CD109Q6YHK3 1445 aa28.3■■■□□ 2.12
CCHCR1-221ENST00000507226 TROQ12816 1431 aaPredicted RBP28.29■■■□□ 2.12
CCHCR1-221ENST00000507226 MAP3K4Q9Y6R4 1608 aa28.29■■■□□ 2.12
CCHCR1-221ENST00000507226 ABCA9Q8IUA7 1624 aa28.24■■■□□ 2.11
CCHCR1-221ENST00000507226 MAGI3Q5TCQ9 1506 aa28.23■■■□□ 2.11
CCHCR1-221ENST00000507226 CFAP43Q8NDM7 1665 aa28.21■■■□□ 2.11
CCHCR1-221ENST00000507226 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.21■■■□□ 2.11
CCHCR1-221ENST00000507226 PPRC1Q5VV67 1664 aaKnown RBP28.2■■■□□ 2.11
CCHCR1-221ENST00000507226 TEX14Q8IWB6 1497 aa28.19■■■□□ 2.1
CCHCR1-221ENST00000507226 TSPOAP1O95153 1857 aa28.16■■■□□ 2.1
CCHCR1-221ENST00000507226 MTUS2Q5JR59 1369 aa28.15■■■□□ 2.1
CCHCR1-221ENST00000507226 TTC37Q6PGP7 1564 aa28.15■■■□□ 2.1
CCHCR1-221ENST00000507226 KIF14Q15058 1648 aa28.14■■■□□ 2.1
CCHCR1-221ENST00000507226 TIAM1Q13009 1591 aa28.11■■■□□ 2.09
CCHCR1-221ENST00000507226 PLCH2O75038 1416 aa28.09■■■□□ 2.09
CCHCR1-221ENST00000507226 MAP3K1Q13233 1512 aa28.08■■■□□ 2.09
CCHCR1-221ENST00000507226 EHBP1L1Q8N3D4 1523 aa28.07■■■□□ 2.08
CCHCR1-221ENST00000507226 COL17A1Q9UMD9 1497 aaPredicted RBP28.04■■■□□ 2.08
CCHCR1-221ENST00000507226 NEO1Q92859 1461 aa28.03■■■□□ 2.08
CCHCR1-221ENST00000507226 PHLDB1Q86UU1 1377 aa28.03■■■□□ 2.08
CCHCR1-221ENST00000507226 APLP2Q06481 763 aa28.03■■■□□ 2.08
CCHCR1-221ENST00000507226 KANK4Q5T7N3 995 aaPredicted RBP28.03■■■□□ 2.08
CCHCR1-221ENST00000507226 LRRC9Q6ZRR7 1453 aa28.02■■■□□ 2.08
CCHCR1-221ENST00000507226 KDM6BO15054 1643 aa28.02■■■□□ 2.08
CCHCR1-221ENST00000507226 FANCAO15360 1455 aa28.02■■■□□ 2.08
CCHCR1-221ENST00000507226 ARAP3Q8WWN8 1544 aa27.98■■■□□ 2.07
CCHCR1-221ENST00000507226 EFCAB2Q5VUJ9 269 aa27.98■■■□□ 2.07
CCHCR1-221ENST00000507226 AKNAQ7Z591 1439 aa27.97■■■□□ 2.07
CCHCR1-221ENST00000507226 CCNB3Q8WWL7 1395 aa27.96■■■□□ 2.07
CCHCR1-221ENST00000507226 GPATCH8Q9UKJ3 1502 aaKnown RBP27.95■■■□□ 2.06
CCHCR1-221ENST00000507226 ARHGAP5Q13017 1502 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms