RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 AEBP2Q6ZN18 517 aaPredicted RBP13.47□□□□□ -0.25
NEK1-203ENST00000507142 MRC2Q9UBG0 1479 aa13.47□□□□□ -0.25
NEK1-203ENST00000507142 PPP1R15AO75807 674 aaPredicted RBP13.47□□□□□ -0.25
NEK1-203ENST00000507142 AQRO60306 1485 aaKnown RBP eCLIP13.44□□□□□ -0.26
NEK1-203ENST00000507142 C14orf37Q86TY3 774 aa13.44□□□□□ -0.26
NEK1-203ENST00000507142 RAD54L2Q9Y4B4 1467 aa13.43□□□□□ -0.26
NEK1-203ENST00000507142 HMGXB3Q12766 1538 aa13.41□□□□□ -0.26
NEK1-203ENST00000507142 FGD5Q6ZNL6 1462 aa13.41□□□□□ -0.26
NEK1-203ENST00000507142 RRP7BPQ9NSQ0 103 aa13.4□□□□□ -0.26
NEK1-203ENST00000507142 GAPVD1Q14C86 1478 aa13.4□□□□□ -0.27
NEK1-203ENST00000507142 CCNB3Q8WWL7 1395 aa13.38□□□□□ -0.27
NEK1-203ENST00000507142 SCAF1Q9H7N4 1312 aaKnown RBP13.38□□□□□ -0.27
NEK1-203ENST00000507142 PTPRGP23470 1445 aa13.36□□□□□ -0.27
NEK1-203ENST00000507142 CEP162Q5TB80 1403 aa13.36□□□□□ -0.27
NEK1-203ENST00000507142 FAM69CQ0P6D2 419 aa13.36□□□□□ -0.27
NEK1-203ENST00000507142 PELP1Q8IZL8 1130 aaKnown RBP13.35□□□□□ -0.27
NEK1-203ENST00000507142 CFTRP13569 1480 aa13.35□□□□□ -0.27
NEK1-203ENST00000507142 RAPGEF2Q9Y4G8 1499 aa13.34□□□□□ -0.27
NEK1-203ENST00000507142 FHAD1B1AJZ9 1412 aa13.33□□□□□ -0.27
NEK1-203ENST00000507142 EFCAB2Q5VUJ9 269 aa13.33□□□□□ -0.28
NEK1-203ENST00000507142 TNIKQ9UKE5 1360 aa13.33□□□□□ -0.28
NEK1-203ENST00000507142 IFT140Q96RY7 1462 aa13.33□□□□□ -0.28
NEK1-203ENST00000507142 GGT6Q6P531 493 aa13.32□□□□□ -0.28
NEK1-203ENST00000507142 SLC24A1O60721 1099 aa13.3□□□□□ -0.28
NEK1-203ENST00000507142 PLEKHG5O94827 1062 aa13.3□□□□□ -0.28
NEK1-203ENST00000507142 KDM2AQ9Y2K7 1162 aa13.29□□□□□ -0.28
NEK1-203ENST00000507142 GRIN2BQ13224 1484 aa13.29□□□□□ -0.28
NEK1-203ENST00000507142 LAMC3Q9Y6N6 1575 aa13.25□□□□□ -0.29
NEK1-203ENST00000507142 UNC13AQ9UPW8 1703 aa13.24□□□□□ -0.29
NEK1-203ENST00000507142 FMN1Q68DA7 1419 aa13.23□□□□□ -0.29
NEK1-203ENST00000507142 TOPBP1Q92547 1522 aa13.23□□□□□ -0.29
NEK1-203ENST00000507142 HAP1P54257 671 aaPredicted RBP13.23□□□□□ -0.29
NEK1-203ENST00000507142 RGL3Q3MIN7 710 aa13.23□□□□□ -0.29
NEK1-203ENST00000507142 FHOD3Q2V2M9 1422 aa13.22□□□□□ -0.29
NEK1-203ENST00000507142 KANK1Q14678 1352 aa13.22□□□□□ -0.29
NEK1-203ENST00000507142 YTHDC1Q96MU7 727 aaKnown RBP13.21□□□□□ -0.29
NEK1-203ENST00000507142 TONSLQ96HA7 1378 aa13.2□□□□□ -0.3
NEK1-203ENST00000507142 IGF1RP08069 1367 aa13.19□□□□□ -0.3
NEK1-203ENST00000507142 ZBTB7CA1YPR0 619 aa13.19□□□□□ -0.3
NEK1-203ENST00000507142 SNAPC4Q5SXM2 1469 aa13.18□□□□□ -0.3
NEK1-203ENST00000507142 NEFMP07197 916 aa13.18□□□□□ -0.3
NEK1-203ENST00000507142 HDGFP51858 240 aaKnown RBP13.18□□□□□ -0.3
NEK1-203ENST00000507142 PRG4Q92954 1404 aaPredicted RBP13.18□□□□□ -0.3
NEK1-203ENST00000507142 A0A0G2JS52 829 aa13.17□□□□□ -0.3
NEK1-203ENST00000507142 HNRNPMP52272 730 aaKnown RBP eCLIP13.16□□□□□ -0.38e-6■■■■□ 19.5
NEK1-203ENST00000507142 POLA1P09884 1462 aaPredicted RBP13.16□□□□□ -0.3
NEK1-203ENST00000507142 SPAG9O60271 1321 aaKnown RBP13.15□□□□□ -0.3
NEK1-203ENST00000507142 KIF3BO15066 747 aa13.14□□□□□ -0.31
NEK1-203ENST00000507142 LMOD2Q6P5Q4 547 aa13.12□□□□□ -0.31
NEK1-203ENST00000507142 DNMBPQ6XZF7 1577 aa13.12□□□□□ -0.31
NEK1-203ENST00000507142 RUSC2Q8N2Y8 1516 aa13.11□□□□□ -0.31
NEK1-203ENST00000507142 NEFLP07196 543 aa13.09□□□□□ -0.31
NEK1-203ENST00000507142 WASHC2CQ9Y4E1 1318 aa13.09□□□□□ -0.31
NEK1-203ENST00000507142 POGKQ9P215 609 aa13.08□□□□□ -0.31
NEK1-203ENST00000507142 CENPBP07199 599 aaPredicted RBP13.08□□□□□ -0.32
NEK1-203ENST00000507142 ACIN1Q9UKV3 1341 aaKnown RBP13.08□□□□□ -0.32
NEK1-203ENST00000507142 CCDC18Q5T9S5 1454 aa13.07□□□□□ -0.32
NEK1-203ENST00000507142 ARHGAP35Q9NRY4 1499 aa13.06□□□□□ -0.32
NEK1-203ENST00000507142 CUX1P39880 1505 aa13.05□□□□□ -0.32
NEK1-203ENST00000507142 HRCP23327 699 aa13.05□□□□□ -0.32
NEK1-203ENST00000507142 EID1Q9Y6B2 187 aa13.05□□□□□ -0.32
NEK1-203ENST00000507142 RSPH4AQ5TD94 716 aa13.04□□□□□ -0.32
NEK1-203ENST00000507142 TMC1Q8TDI8 760 aa13.04□□□□□ -0.32
NEK1-203ENST00000507142 KANK4Q5T7N3 995 aaPredicted RBP13.03□□□□□ -0.32
NEK1-203ENST00000507142 MYT1Q01538 1121 aa13.03□□□□□ -0.32
NEK1-203ENST00000507142 URB2Q14146 1524 aaKnown RBP13.02□□□□□ -0.33
NEK1-203ENST00000507142 VPS8Q8N3P4 1428 aa13.02□□□□□ -0.33
NEK1-203ENST00000507142 ANKRD30AQ9BXX3 1397 aa13□□□□□ -0.33
NEK1-203ENST00000507142 ANP32CO43423 234 aa12.99□□□□□ -0.33
NEK1-203ENST00000507142 ZNF608Q9ULD9 1512 aaPredicted RBP12.99□□□□□ -0.33
NEK1-203ENST00000507142 SYNJ2O15056 1496 aa12.99□□□□□ -0.33
NEK1-203ENST00000507142 PRDM2Q13029 1718 aa12.98□□□□□ -0.33
NEK1-203ENST00000507142 SYNJ1O43426 1573 aa12.97□□□□□ -0.33
NEK1-203ENST00000507142 PEG3Q9GZU2 1588 aa12.96□□□□□ -0.33
NEK1-203ENST00000507142 STK26Q9P289 416 aa12.96□□□□□ -0.33
NEK1-203ENST00000507142 SAFB2Q14151 953 aaKnown RBP eCLIP12.95□□□□□ -0.34
NEK1-203ENST00000507142 MAGI1Q96QZ7 1491 aaPredicted RBP12.95□□□□□ -0.34
NEK1-203ENST00000507142 NUP155O75694 1391 aa12.94□□□□□ -0.34
NEK1-203ENST00000507142 PKD2Q13563 968 aa12.94□□□□□ -0.34
NEK1-203ENST00000507142 NUTM2DQ5VT03 806 aaPredicted RBP12.94□□□□□ -0.34
NEK1-203ENST00000507142 TOP2BQ02880 1626 aa12.92□□□□□ -0.34
NEK1-203ENST00000507142 ABCA10Q8WWZ4 1543 aa12.92□□□□□ -0.34
NEK1-203ENST00000507142 DCAF11Q8TEB1 546 aa12.91□□□□□ -0.34
NEK1-203ENST00000507142 CARD11Q9BXL7 1154 aa12.9□□□□□ -0.34
NEK1-203ENST00000507142 KIAA0586Q9BVV6 1533 aa12.89□□□□□ -0.35
NEK1-203ENST00000507142 GRIN2AQ12879 1464 aa12.89□□□□□ -0.35
NEK1-203ENST00000507142 NPM2Q86SE8 214 aaKnown RBP12.88□□□□□ -0.35
NEK1-203ENST00000507142 AFAP1Q8N556 730 aa12.88□□□□□ -0.35
NEK1-203ENST00000507142 UACAQ9BZF9 1416 aa12.87□□□□□ -0.35
NEK1-203ENST00000507142 PPM1GO15355 546 aaPredicted RBP12.87□□□□□ -0.35
NEK1-203ENST00000507142 RAPGEF3O95398 923 aa12.87□□□□□ -0.35
NEK1-203ENST00000507142 FOXD1Q16676 465 aa12.87□□□□□ -0.35
NEK1-203ENST00000507142 ERICH6Q7L0X2 663 aa12.87□□□□□ -0.35
NEK1-203ENST00000507142 SRPK2P78362 688 aaKnown RBP12.86□□□□□ -0.35
NEK1-203ENST00000507142 CDCA8Q53HL2 280 aa12.85□□□□□ -0.35
NEK1-203ENST00000507142 DIEXFQ68CQ4 756 aaKnown RBP12.85□□□□□ -0.35
NEK1-203ENST00000507142 PAK3O75914 559 aaPredicted RBP12.84□□□□□ -0.35
NEK1-203ENST00000507142 EIF4G2P78344 907 aaKnown RBP eCLIP12.84□□□□□ -0.35
NEK1-203ENST00000507142 ARHGAP5Q13017 1502 aa12.84□□□□□ -0.35
NEK1-203ENST00000507142 SOX12O15370 315 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms