RNA–Protein interactions for RNA: ENST00000507002.5

SIL1-209, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-209ENST00000507002 VPS8Q8N3P4 1428 aa19.87■□□□□ 0.77
SIL1-209ENST00000507002 SYNJ2O15056 1496 aa19.84■□□□□ 0.77
SIL1-209ENST00000507002 GRIN2AQ12879 1464 aa19.83■□□□□ 0.76
SIL1-209ENST00000507002 EFCAB5A4FU69 1503 aa19.81■□□□□ 0.76
SIL1-209ENST00000507002 IQGAP2Q13576 1575 aa19.78■□□□□ 0.76
SIL1-209ENST00000507002 SAMD9Q5K651 1589 aa19.75■□□□□ 0.75
SIL1-209ENST00000507002 CHMP7Q8WUX9 453 aaPredicted RBP19.75■□□□□ 0.75
SIL1-209ENST00000507002 CEP170Q5SW79 1584 aa19.73■□□□□ 0.75
SIL1-209ENST00000507002 KIAA0586Q9BVV6 1533 aa19.72■□□□□ 0.75
SIL1-209ENST00000507002 CHD1O14646 1710 aa19.71■□□□□ 0.75
SIL1-209ENST00000507002 NUP160Q12769 1436 aa19.69■□□□□ 0.74
SIL1-209ENST00000507002 FHOD3Q2V2M9 1422 aa19.69■□□□□ 0.74
SIL1-209ENST00000507002 FBLN2P98095 1184 aa19.69■□□□□ 0.74
SIL1-209ENST00000507002 UGGT2Q9NYU1 1516 aa19.68■□□□□ 0.74
SIL1-209ENST00000507002 PPARGC1BQ86YN6 1023 aaKnown RBP19.68■□□□□ 0.74
SIL1-209ENST00000507002 P3H3Q8IVL6 736 aa19.67■□□□□ 0.74
SIL1-209ENST00000507002 TRIM26Q12899 539 aaPredicted RBP19.65■□□□□ 0.74
SIL1-209ENST00000507002 PCF11O94913 1555 aaKnown RBP19.63■□□□□ 0.73
SIL1-209ENST00000507002 APLP2Q06481 763 aa19.63■□□□□ 0.73
SIL1-209ENST00000507002 PCGF6Q9BYE7 350 aa19.61■□□□□ 0.73
SIL1-209ENST00000507002 FMN1Q68DA7 1419 aa19.59■□□□□ 0.73
SIL1-209ENST00000507002 KIAA0556O60303 1618 aa19.58■□□□□ 0.73
SIL1-209ENST00000507002 FYCO1Q9BQS8 1478 aa19.57■□□□□ 0.72
SIL1-209ENST00000507002 DISP1Q96F81 1524 aa19.56■□□□□ 0.72
SIL1-209ENST00000507002 CASKIN1Q8WXD9 1431 aa19.56■□□□□ 0.72
SIL1-209ENST00000507002 TTBK1Q5TCY1 1321 aaPredicted RBP19.55■□□□□ 0.72
SIL1-209ENST00000507002 MAP3K1Q13233 1512 aa19.55■□□□□ 0.72
SIL1-209ENST00000507002 CFAP43Q8NDM7 1665 aa19.54■□□□□ 0.72
SIL1-209ENST00000507002 TIAM1Q13009 1591 aa19.53■□□□□ 0.72
SIL1-209ENST00000507002 JPH4Q96JJ6 628 aa19.5■□□□□ 0.71
SIL1-209ENST00000507002 DNAJC5Q9H3Z4 198 aa19.48■□□□□ 0.71
SIL1-209ENST00000507002 CARMIL2Q6F5E8 1435 aa19.47■□□□□ 0.71
SIL1-209ENST00000507002 LRRIQ1Q96JM4 1722 aa19.47■□□□□ 0.71
SIL1-209ENST00000507002 SHROOM2Q13796 1616 aa19.46■□□□□ 0.71
SIL1-209ENST00000507002 HECW1Q76N89 1606 aa19.45■□□□□ 0.7
SIL1-209ENST00000507002 KANK4Q5T7N3 995 aaPredicted RBP19.45■□□□□ 0.7
SIL1-209ENST00000507002 ATP1B4Q9UN42 357 aaPredicted RBP19.45■□□□□ 0.7
SIL1-209ENST00000507002 CLASP1Q7Z460 1538 aa19.44■□□□□ 0.7
SIL1-209ENST00000507002 LRRC9Q6ZRR7 1453 aa19.41■□□□□ 0.7
SIL1-209ENST00000507002 PRG4Q92954 1404 aaPredicted RBP19.4■□□□□ 0.7
SIL1-209ENST00000507002 RAPGEF6Q8TEU7 1601 aa19.4■□□□□ 0.7
SIL1-209ENST00000507002 CCDC18Q5T9S5 1454 aa19.38■□□□□ 0.69
SIL1-209ENST00000507002 EPRSP07814 1512 aaKnown RBP19.34■□□□□ 0.69
SIL1-209ENST00000507002 NUP153P49790 1475 aaKnown RBP19.31■□□□□ 0.68
SIL1-209ENST00000507002 ABCA8O94911 1581 aa19.31■□□□□ 0.68
SIL1-209ENST00000507002 CDK13Q14004 1512 aaKnown RBP19.3■□□□□ 0.68
SIL1-209ENST00000507002 PLB1Q6P1J6 1458 aa19.3■□□□□ 0.68
SIL1-209ENST00000507002 ERCC6L2Q5T890 1561 aa19.3■□□□□ 0.68
SIL1-209ENST00000507002 EHBP1L1Q8N3D4 1523 aa19.3■□□□□ 0.68
SIL1-209ENST00000507002 MTUS2Q5JR59 1369 aa19.29■□□□□ 0.68
SIL1-209ENST00000507002 PTPRGP23470 1445 aa19.27■□□□□ 0.68
SIL1-209ENST00000507002 MAGI3Q5TCQ9 1506 aa19.26■□□□□ 0.67
SIL1-209ENST00000507002 RRBP1Q9P2E9 1410 aaKnown RBP19.25■□□□□ 0.67
SIL1-209ENST00000507002 SUPT6HQ7KZ85 1726 aaKnown RBP19.25■□□□□ 0.67
SIL1-209ENST00000507002 PHLDB1Q86UU1 1377 aa19.22■□□□□ 0.67
SIL1-209ENST00000507002 ARID3CA6NKF2 412 aa19.22■□□□□ 0.67
SIL1-209ENST00000507002 OSCARQ8IYS5 282 aa19.21■□□□□ 0.67
SIL1-209ENST00000507002 NCOA2Q15596 1464 aa19.19■□□□□ 0.66
SIL1-209ENST00000507002 CCNB3Q8WWL7 1395 aa19.19■□□□□ 0.66
SIL1-209ENST00000507002 UACAQ9BZF9 1416 aa19.17■□□□□ 0.66
SIL1-209ENST00000507002 ARHGEF11O15085 1522 aa19.17■□□□□ 0.66
SIL1-209ENST00000507002 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.14■□□□□ 0.65
SIL1-209ENST00000507002 HNRNPUL2Q1KMD3 747 aaKnown RBP19.14■□□□□ 0.65
SIL1-209ENST00000507002 CDK11AQ9UQ88 783 aaPredicted RBP19.14■□□□□ 0.65
SIL1-209ENST00000507002 ATP10BO94823 1461 aa19.14■□□□□ 0.65
SIL1-209ENST00000507002 ABCC2Q92887 1545 aa19.14■□□□□ 0.65
SIL1-209ENST00000507002 TROQ12816 1431 aaPredicted RBP19.12■□□□□ 0.65
SIL1-209ENST00000507002 ADCY10Q96PN6 1610 aa19.11■□□□□ 0.65
SIL1-209ENST00000507002 MYOM3Q5VTT5 1437 aa19.11■□□□□ 0.65
SIL1-209ENST00000507002 FGD6Q6ZV73 1430 aa19.1■□□□□ 0.65
SIL1-209ENST00000507002 UHRF1BP1LA0JNW5 1464 aa19.09■□□□□ 0.65
SIL1-209ENST00000507002 KIF14Q15058 1648 aa19.06■□□□□ 0.64
SIL1-209ENST00000507002 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.06■□□□□ 0.64
SIL1-209ENST00000507002 FAM50AQ14320 339 aaKnown RBP19.05■□□□□ 0.64
SIL1-209ENST00000507002 PTPN23Q9H3S7 1636 aa19.04■□□□□ 0.64
SIL1-209ENST00000507002 ZCCHC11Q5TAX3 1644 aaKnown RBP19.03■□□□□ 0.64
SIL1-209ENST00000507002 PLEKHD1A6NEE1 506 aa19.03■□□□□ 0.64
SIL1-209ENST00000507002 ITSN2Q9NZM3 1697 aa19.01■□□□□ 0.63
SIL1-209ENST00000507002 HRCP23327 699 aa19.01■□□□□ 0.63
SIL1-209ENST00000507002 KDM5BQ9UGL1 1544 aa19■□□□□ 0.63
SIL1-209ENST00000507002 TCOF1Q13428 1488 aaKnown RBP19■□□□□ 0.63
SIL1-209ENST00000507002 MIA2Q96PC5 1412 aa19■□□□□ 0.63
SIL1-209ENST00000507002 ITGAEP38570 1179 aa18.98■□□□□ 0.63
SIL1-209ENST00000507002 ABCC10Q5T3U5 1492 aa18.97■□□□□ 0.63
SIL1-209ENST00000507002 CDC42BPAQ5VT25 1732 aa18.96■□□□□ 0.63
SIL1-209ENST00000507002 GPATCH8Q9UKJ3 1502 aaKnown RBP18.94■□□□□ 0.62
SIL1-209ENST00000507002 CCER1Q8TC90 406 aaPredicted RBP18.88■□□□□ 0.61
SIL1-209ENST00000507002 TTC37Q6PGP7 1564 aa18.88■□□□□ 0.61
SIL1-209ENST00000507002 PREX2Q70Z35 1606 aa18.88■□□□□ 0.61
SIL1-209ENST00000507002 RIMBP3CA6NJZ7 1639 aa18.87■□□□□ 0.61
SIL1-209ENST00000507002 RIMBP3BA6NNM3 1639 aa18.87■□□□□ 0.61
SIL1-209ENST00000507002 CAMSAP2Q08AD1 1489 aa18.87■□□□□ 0.61
SIL1-209ENST00000507002 PTPRKQ15262 1439 aa18.87■□□□□ 0.61
SIL1-209ENST00000507002 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.87■□□□□ 0.61
SIL1-209ENST00000507002 CFDP1Q9UEE9 299 aaPredicted RBP18.87■□□□□ 0.61
SIL1-209ENST00000507002 RIMBP3Q9UFD9 1639 aa18.87■□□□□ 0.61
SIL1-209ENST00000507002 MYO5CQ9NQX4 1742 aa18.86■□□□□ 0.61
SIL1-209ENST00000507002 CDC42BPBQ9Y5S2 1711 aa18.86■□□□□ 0.61
SIL1-209ENST00000507002 DNMT1P26358 1616 aaKnown RBP18.85■□□□□ 0.61
SIL1-209ENST00000507002 SETD5Q9C0A6 1442 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms