RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 KIF21BO75037 1637 aa16.16■□□□□ 0.18
SFXN1-205ENST00000506963 ARHGEF11O15085 1522 aa16.16■□□□□ 0.18
SFXN1-205ENST00000506963 RIMBP3CA6NJZ7 1639 aa16.13■□□□□ 0.17
SFXN1-205ENST00000506963 RIMBP3BA6NNM3 1639 aa16.13■□□□□ 0.17
SFXN1-205ENST00000506963 RIMBP3Q9UFD9 1639 aa16.13■□□□□ 0.17
SFXN1-205ENST00000506963 FAM9AQ8IZU1 332 aaPredicted RBP16.12■□□□□ 0.17
SFXN1-205ENST00000506963 JPH4Q96JJ6 628 aa16.11■□□□□ 0.17
SFXN1-205ENST00000506963 IQGAP2Q13576 1575 aa16.11■□□□□ 0.17
SFXN1-205ENST00000506963 CTTNBP2Q8WZ74 1663 aa16.11■□□□□ 0.17
SFXN1-205ENST00000506963 UGGT2Q9NYU1 1516 aa16.06■□□□□ 0.16
SFXN1-205ENST00000506963 PRG4Q92954 1404 aaPredicted RBP16.06■□□□□ 0.16
SFXN1-205ENST00000506963 GOLGA3Q08378 1498 aa16.05■□□□□ 0.16
SFXN1-205ENST00000506963 ERCC6L2Q5T890 1561 aa16.04■□□□□ 0.16
SFXN1-205ENST00000506963 ARAP1Q96P48 1450 aa16.04■□□□□ 0.16
SFXN1-205ENST00000506963 DISP1Q96F81 1524 aa15.99■□□□□ 0.15
SFXN1-205ENST00000506963 CARMIL2Q6F5E8 1435 aa15.99■□□□□ 0.15
SFXN1-205ENST00000506963 KIAA0556O60303 1618 aa15.96■□□□□ 0.15
SFXN1-205ENST00000506963 TNIKQ9UKE5 1360 aa15.94■□□□□ 0.14
SFXN1-205ENST00000506963 SAMD9Q5K651 1589 aa15.94■□□□□ 0.14
SFXN1-205ENST00000506963 CYB5RLQ6IPT4 315 aa15.93■□□□□ 0.14
SFXN1-205ENST00000506963 UBTFP17480 764 aaKnown RBP15.92■□□□□ 0.14
SFXN1-205ENST00000506963 EFCAB5A4FU69 1503 aa15.9■□□□□ 0.14
SFXN1-205ENST00000506963 PTPRGP23470 1445 aa15.9■□□□□ 0.14
SFXN1-205ENST00000506963 UHRF1BP1LA0JNW5 1464 aa15.84■□□□□ 0.13
SFXN1-205ENST00000506963 EHMT2Q96KQ7 1210 aa15.82■□□□□ 0.12
SFXN1-205ENST00000506963 UACAQ9BZF9 1416 aa15.82■□□□□ 0.12
SFXN1-205ENST00000506963 ADCY10Q96PN6 1610 aa15.82■□□□□ 0.12
SFXN1-205ENST00000506963 ARHGAP35Q9NRY4 1499 aa15.81■□□□□ 0.12
SFXN1-205ENST00000506963 ABCA8O94911 1581 aa15.8■□□□□ 0.12
SFXN1-205ENST00000506963 ABCC2Q92887 1545 aa15.79■□□□□ 0.12
SFXN1-205ENST00000506963 FHOD3Q2V2M9 1422 aa15.77■□□□□ 0.12
SFXN1-205ENST00000506963 P3H3Q8IVL6 736 aa15.76■□□□□ 0.11
SFXN1-205ENST00000506963 PLB1Q6P1J6 1458 aa15.76■□□□□ 0.11
SFXN1-205ENST00000506963 LOC105371045A0A1W2PR82 267 aa15.75■□□□□ 0.11
SFXN1-205ENST00000506963 CLIP1P30622 1438 aa15.75■□□□□ 0.11
SFXN1-205ENST00000506963 KDM5BQ9UGL1 1544 aa15.74■□□□□ 0.11
SFXN1-205ENST00000506963 RANGAP1P46060 587 aaPredicted RBP15.74■□□□□ 0.11
SFXN1-205ENST00000506963 FMN1Q68DA7 1419 aa15.73■□□□□ 0.11
SFXN1-205ENST00000506963 MAPKBP1O60336 1514 aa15.73■□□□□ 0.11
SFXN1-205ENST00000506963 TTBK1Q5TCY1 1321 aaPredicted RBP15.72■□□□□ 0.11
SFXN1-205ENST00000506963 CEP162Q5TB80 1403 aa15.72■□□□□ 0.11
SFXN1-205ENST00000506963 RAPGEF6Q8TEU7 1601 aa15.72■□□□□ 0.11
SFXN1-205ENST00000506963 NPM1P06748 294 aaKnown RBP eCLIP15.69■□□□□ 0.1
SFXN1-205ENST00000506963 NUP153P49790 1475 aaKnown RBP15.67■□□□□ 0.1
SFXN1-205ENST00000506963 ZCCHC11Q5TAX3 1644 aaKnown RBP15.67■□□□□ 0.1
SFXN1-205ENST00000506963 ATP10BO94823 1461 aa15.65■□□□□ 0.1
SFXN1-205ENST00000506963 CASKIN1Q8WXD9 1431 aa15.63■□□□□ 0.09
SFXN1-205ENST00000506963 ASXL2Q76L83 1435 aa15.62■□□□□ 0.09
SFXN1-205ENST00000506963 HECW1Q76N89 1606 aa15.62■□□□□ 0.09
SFXN1-205ENST00000506963 ABCC10Q5T3U5 1492 aa15.61■□□□□ 0.09
SFXN1-205ENST00000506963 FYCO1Q9BQS8 1478 aa15.6■□□□□ 0.09
SFXN1-205ENST00000506963 PCF11O94913 1555 aaKnown RBP15.59■□□□□ 0.09
SFXN1-205ENST00000506963 WDR7Q9Y4E6 1490 aa15.59■□□□□ 0.09
SFXN1-205ENST00000506963 EPRSP07814 1512 aaKnown RBP15.58■□□□□ 0.09
SFXN1-205ENST00000506963 DIP2BQ9P265 1576 aa15.58■□□□□ 0.09
SFXN1-205ENST00000506963 KIF13AQ9H1H9 1805 aa15.57■□□□□ 0.08
SFXN1-205ENST00000506963 GLI2P10070 1586 aa15.57■□□□□ 0.08
SFXN1-205ENST00000506963 LRRIQ1Q96JM4 1722 aa15.55■□□□□ 0.08
SFXN1-205ENST00000506963 CCDC18Q5T9S5 1454 aa15.55■□□□□ 0.08
SFXN1-205ENST00000506963 VPS8Q8N3P4 1428 aa15.54■□□□□ 0.08
SFXN1-205ENST00000506963 CDK13Q14004 1512 aaKnown RBP15.53■□□□□ 0.08
SFXN1-205ENST00000506963 TRHP20396 242 aaPredicted RBP15.51■□□□□ 0.07
SFXN1-205ENST00000506963 ARID3CA6NKF2 412 aa15.5■□□□□ 0.07
SFXN1-205ENST00000506963 PLEKHD1A6NEE1 506 aa15.49■□□□□ 0.07
SFXN1-205ENST00000506963 FAM69CQ0P6D2 419 aa15.49■□□□□ 0.07
SFXN1-205ENST00000506963 MAP3K4Q9Y6R4 1608 aa15.48■□□□□ 0.07
SFXN1-205ENST00000506963 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.48■□□□□ 0.07
SFXN1-205ENST00000506963 HNRNPUL2Q1KMD3 747 aaKnown RBP15.48■□□□□ 0.07
SFXN1-205ENST00000506963 CDK11AQ9UQ88 783 aaPredicted RBP15.48■□□□□ 0.07
SFXN1-205ENST00000506963 ATP1B4Q9UN42 357 aaPredicted RBP15.47■□□□□ 0.07
SFXN1-205ENST00000506963 ABCA9Q8IUA7 1624 aa15.46■□□□□ 0.07
SFXN1-205ENST00000506963 TROQ12816 1431 aaPredicted RBP15.46■□□□□ 0.07
SFXN1-205ENST00000506963 CFAP43Q8NDM7 1665 aa15.46■□□□□ 0.07
SFXN1-205ENST00000506963 MAP3K1Q13233 1512 aa15.45■□□□□ 0.06
SFXN1-205ENST00000506963 MAGI3Q5TCQ9 1506 aa15.43■□□□□ 0.06
SFXN1-205ENST00000506963 PPRC1Q5VV67 1664 aaKnown RBP15.42■□□□□ 0.06
SFXN1-205ENST00000506963 KCNH8Q96L42 1107 aa15.42■□□□□ 0.06
SFXN1-205ENST00000506963 TIAM1Q13009 1591 aa15.41■□□□□ 0.06
SFXN1-205ENST00000506963 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.4■□□□□ 0.06
SFXN1-205ENST00000506963 CD109Q6YHK3 1445 aa15.4■□□□□ 0.06
SFXN1-205ENST00000506963 KIF14Q15058 1648 aa15.39■□□□□ 0.05
SFXN1-205ENST00000506963 TEX14Q8IWB6 1497 aa15.38■□□□□ 0.05
SFXN1-205ENST00000506963 EHBP1L1Q8N3D4 1523 aa15.38■□□□□ 0.05
SFXN1-205ENST00000506963 TTC37Q6PGP7 1564 aa15.37■□□□□ 0.05
SFXN1-205ENST00000506963 TSPOAP1O95153 1857 aa15.37■□□□□ 0.05
SFXN1-205ENST00000506963 ARAP3Q8WWN8 1544 aa15.37■□□□□ 0.05
SFXN1-205ENST00000506963 MTUS2Q5JR59 1369 aa15.35■□□□□ 0.05
SFXN1-205ENST00000506963 PHLDB1Q86UU1 1377 aa15.34■□□□□ 0.05
SFXN1-205ENST00000506963 PLCH2O75038 1416 aa15.34■□□□□ 0.05
SFXN1-205ENST00000506963 LRRC9Q6ZRR7 1453 aa15.33■□□□□ 0.05
SFXN1-205ENST00000506963 MYO5CQ9NQX4 1742 aa15.32■□□□□ 0.04
SFXN1-205ENST00000506963 NEO1Q92859 1461 aa15.32■□□□□ 0.04
SFXN1-205ENST00000506963 SUPT6HQ7KZ85 1726 aaKnown RBP15.29■□□□□ 0.04
SFXN1-205ENST00000506963 PREX2Q70Z35 1606 aa15.29■□□□□ 0.04
SFXN1-205ENST00000506963 CFAP74Q9C0B2 1584 aa15.29■□□□□ 0.04
SFXN1-205ENST00000506963 APLP2Q06481 763 aa15.28■□□□□ 0.04
SFXN1-205ENST00000506963 CDC42BPAQ5VT25 1732 aa15.28■□□□□ 0.04
SFXN1-205ENST00000506963 GPATCH8Q9UKJ3 1502 aaKnown RBP15.27■□□□□ 0.04
SFXN1-205ENST00000506963 FANCAO15360 1455 aa15.27■□□□□ 0.04
SFXN1-205ENST00000506963 CDC42BPBQ9Y5S2 1711 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms