RNA–Protein interactions for RNA: ENST00000506958.5

APBB3-213, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 3

Gene APBB3, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-213ENST00000506958 RAPGEF2Q9Y4G8 1499 aa36.2■■■■□ 3.39
APBB3-213ENST00000506958 JPH4Q96JJ6 628 aa36.18■■■■□ 3.38
APBB3-213ENST00000506958 PRG4Q92954 1404 aaPredicted RBP36.16■■■■□ 3.38
APBB3-213ENST00000506958 ERCC6L2Q5T890 1561 aa36.15■■■■□ 3.38
APBB3-213ENST00000506958 EEA1Q15075 1411 aa36.07■■■■□ 3.36
APBB3-213ENST00000506958 IQGAP2Q13576 1575 aa36.03■■■■□ 3.36
APBB3-213ENST00000506958 PRXQ9BXM0 1461 aa36■■■■□ 3.35
APBB3-213ENST00000506958 CHIC1Q5VXU3 224 aa35.97■■■■□ 3.35
APBB3-213ENST00000506958 CSRNP3Q8WYN3 585 aa35.93■■■■□ 3.34
APBB3-213ENST00000506958 CARMIL2Q6F5E8 1435 aa35.91■■■■□ 3.34
APBB3-213ENST00000506958 CTTNBP2Q8WZ74 1663 aa35.89■■■■□ 3.34
APBB3-213ENST00000506958 UGGT2Q9NYU1 1516 aa35.82■■■■□ 3.32
APBB3-213ENST00000506958 TNIKQ9UKE5 1360 aa35.76■■■■□ 3.31
APBB3-213ENST00000506958 PTPRGP23470 1445 aa35.72■■■■□ 3.31
APBB3-213ENST00000506958 DISP1Q96F81 1524 aa35.72■■■■□ 3.31
APBB3-213ENST00000506958 FAM9AQ8IZU1 332 aaPredicted RBP35.7■■■■□ 3.31
APBB3-213ENST00000506958 TRHP20396 242 aaPredicted RBP35.69■■■■□ 3.3
APBB3-213ENST00000506958 GOLGA3Q08378 1498 aa35.67■■■■□ 3.3
APBB3-213ENST00000506958 KIAA0556O60303 1618 aa35.67■■■■□ 3.3
APBB3-213ENST00000506958 KIF21BO75037 1637 aa35.65■■■■□ 3.3
APBB3-213ENST00000506958 ADCY10Q96PN6 1610 aa35.62■■■■□ 3.29
APBB3-213ENST00000506958 NPM1P06748 294 aaKnown RBP eCLIP35.6■■■■□ 3.29
APBB3-213ENST00000506958 TTBK1Q5TCY1 1321 aaPredicted RBP35.55■■■■□ 3.28
APBB3-213ENST00000506958 UACAQ9BZF9 1416 aa35.49■■■■□ 3.27
APBB3-213ENST00000506958 UHRF1BP1LA0JNW5 1464 aa35.48■■■■□ 3.27
APBB3-213ENST00000506958 MAPKBP1O60336 1514 aa35.48■■■■□ 3.27
APBB3-213ENST00000506958 ABCC2Q92887 1545 aa35.44■■■■□ 3.26
APBB3-213ENST00000506958 SAMD9Q5K651 1589 aa35.38■■■■□ 3.25
APBB3-213ENST00000506958 ABCC10Q5T3U5 1492 aa35.3■■■■□ 3.24
APBB3-213ENST00000506958 UBTFP17480 764 aaKnown RBP35.3■■■■□ 3.24
APBB3-213ENST00000506958 KDM5BQ9UGL1 1544 aa35.29■■■■□ 3.24
APBB3-213ENST00000506958 KIF13AQ9H1H9 1805 aa35.29■■■■□ 3.24
APBB3-213ENST00000506958 PLB1Q6P1J6 1458 aa35.28■■■■□ 3.24
APBB3-213ENST00000506958 EFCAB5A4FU69 1503 aa35.27■■■■□ 3.24
APBB3-213ENST00000506958 ABCA8O94911 1581 aa35.27■■■■□ 3.24
APBB3-213ENST00000506958 P3H3Q8IVL6 736 aa35.24■■■■□ 3.23
APBB3-213ENST00000506958 DIP2BQ9P265 1576 aa35.24■■■■□ 3.23
APBB3-213ENST00000506958 ZCCHC11Q5TAX3 1644 aaKnown RBP35.21■■■■□ 3.23
APBB3-213ENST00000506958 RANGAP1P46060 587 aaPredicted RBP35.2■■■■□ 3.23
APBB3-213ENST00000506958 FAM69CQ0P6D2 419 aa35.2■■■■□ 3.23
APBB3-213ENST00000506958 EHMT2Q96KQ7 1210 aa35.2■■■■□ 3.23
APBB3-213ENST00000506958 ASXL2Q76L83 1435 aa35.2■■■■□ 3.23
APBB3-213ENST00000506958 FHOD3Q2V2M9 1422 aa35.13■■■■□ 3.21
APBB3-213ENST00000506958 RAPGEF6Q8TEU7 1601 aa35.1■■■■□ 3.21
APBB3-213ENST00000506958 GLI2P10070 1586 aa35.05■■■■□ 3.2
APBB3-213ENST00000506958 WDR7Q9Y4E6 1490 aa35.03■■■■□ 3.2
APBB3-213ENST00000506958 EPRSP07814 1512 aaKnown RBP35■■■■□ 3.19
APBB3-213ENST00000506958 ARHGAP35Q9NRY4 1499 aa34.97■■■■□ 3.19
APBB3-213ENST00000506958 ATP10BO94823 1461 aa34.95■■■■□ 3.19
APBB3-213ENST00000506958 FMN1Q68DA7 1419 aa34.94■■■■□ 3.18
APBB3-213ENST00000506958 TSPOAP1O95153 1857 aa34.92■■■■□ 3.18
APBB3-213ENST00000506958 NUP153P49790 1475 aaKnown RBP34.91■■■■□ 3.18
APBB3-213ENST00000506958 ARID3CA6NKF2 412 aa34.87■■■■□ 3.17
APBB3-213ENST00000506958 MAP3K4Q9Y6R4 1608 aa34.86■■■■□ 3.17
APBB3-213ENST00000506958 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.83■■■■□ 3.17
APBB3-213ENST00000506958 HNRNPUL2Q1KMD3 747 aaKnown RBP34.83■■■■□ 3.17
APBB3-213ENST00000506958 TEX14Q8IWB6 1497 aa34.79■■■■□ 3.16
APBB3-213ENST00000506958 HECW1Q76N89 1606 aa34.79■■■■□ 3.16
APBB3-213ENST00000506958 CFAP43Q8NDM7 1665 aa34.79■■■■□ 3.16
APBB3-213ENST00000506958 KCNH8Q96L42 1107 aa34.78■■■■□ 3.16
APBB3-213ENST00000506958 PPRC1Q5VV67 1664 aaKnown RBP34.78■■■■□ 3.16
APBB3-213ENST00000506958 CLIP1P30622 1438 aa34.76■■■■□ 3.16
APBB3-213ENST00000506958 KDM6BO15054 1643 aa34.73■■■■□ 3.15
APBB3-213ENST00000506958 CD109Q6YHK3 1445 aa34.71■■■■□ 3.15
APBB3-213ENST00000506958 PLEKHD1A6NEE1 506 aa34.68■■■■□ 3.14
APBB3-213ENST00000506958 MAGI3Q5TCQ9 1506 aa34.67■■■■□ 3.14
APBB3-213ENST00000506958 ABCA9Q8IUA7 1624 aa34.66■■■■□ 3.14
APBB3-213ENST00000506958 ATP1B4Q9UN42 357 aaPredicted RBP34.65■■■■□ 3.14
APBB3-213ENST00000506958 CDK13Q14004 1512 aaKnown RBP34.64■■■■□ 3.14
APBB3-213ENST00000506958 CASKIN1Q8WXD9 1431 aa34.6■■■■□ 3.13
APBB3-213ENST00000506958 PCF11O94913 1555 aaKnown RBP34.58■■■■□ 3.13
APBB3-213ENST00000506958 CDK11AQ9UQ88 783 aaPredicted RBP34.58■■■■□ 3.13
APBB3-213ENST00000506958 CEP162Q5TB80 1403 aa34.56■■■■□ 3.12
APBB3-213ENST00000506958 FYCO1Q9BQS8 1478 aa34.55■■■■□ 3.12
APBB3-213ENST00000506958 CCDC18Q5T9S5 1454 aa34.54■■■■□ 3.12
APBB3-213ENST00000506958 PHLDB1Q86UU1 1377 aa34.47■■■■□ 3.11
APBB3-213ENST00000506958 LRRIQ1Q96JM4 1722 aa34.47■■■■□ 3.11
APBB3-213ENST00000506958 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.44■■■■□ 3.1
APBB3-213ENST00000506958 TROQ12816 1431 aaPredicted RBP34.42■■■■□ 3.1
APBB3-213ENST00000506958 LOC105371045A0A1W2PR82 267 aa34.42■■■■□ 3.1
APBB3-213ENST00000506958 NEO1Q92859 1461 aa34.41■■■■□ 3.1
APBB3-213ENST00000506958 COL17A1Q9UMD9 1497 aaPredicted RBP34.4■■■■□ 3.1
APBB3-213ENST00000506958 KIF14Q15058 1648 aa34.4■■■■□ 3.1
APBB3-213ENST00000506958 TTC37Q6PGP7 1564 aa34.4■■■■□ 3.1
APBB3-213ENST00000506958 ARAP3Q8WWN8 1544 aa34.37■■■■□ 3.09
APBB3-213ENST00000506958 CFAP74Q9C0B2 1584 aa34.36■■■■□ 3.09
APBB3-213ENST00000506958 FANCAO15360 1455 aa34.28■■■■□ 3.08
APBB3-213ENST00000506958 MYO5CQ9NQX4 1742 aa34.28■■■■□ 3.08
APBB3-213ENST00000506958 PLCH2O75038 1416 aa34.26■■■■□ 3.07
APBB3-213ENST00000506958 AKNAQ7Z591 1439 aa34.21■■■■□ 3.07
APBB3-213ENST00000506958 VPS8Q8N3P4 1428 aa34.18■■■■□ 3.06
APBB3-213ENST00000506958 DENND4BO75064 1496 aaPredicted RBP34.15■■■■□ 3.06
APBB3-213ENST00000506958 EFCAB2Q5VUJ9 269 aa34.15■■■■□ 3.06
APBB3-213ENST00000506958 MTUS2Q5JR59 1369 aa34.13■■■■□ 3.05
APBB3-213ENST00000506958 ARHGAP5Q13017 1502 aa34.12■■■■□ 3.05
APBB3-213ENST00000506958 ADGRL1O94910 1474 aa34.11■■■■□ 3.05
APBB3-213ENST00000506958 PREX2Q70Z35 1606 aa34.09■■■■□ 3.05
APBB3-213ENST00000506958 RAPGEF3O95398 923 aa34.09■■■■□ 3.05
APBB3-213ENST00000506958 FRMPD1Q5SYB0 1578 aa34.09■■■■□ 3.05
APBB3-213ENST00000506958 EHBP1L1Q8N3D4 1523 aa34.09■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms